Project
ENCODE: H3K4me3 ChIP-Seq of primary human cells
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CREMA is a free online tool that recognizes most important transcription factors that change the chromatin state across different samples.

Results for RAD21_SMC3

Z-value: 1.50

Motif logo

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Transcription factors associated with RAD21_SMC3

Gene Symbol Gene ID Gene Info
ENSG00000164754.8 RAD21
ENSG00000108055.9 SMC3

Correlations of motif activity and signal intensity at CREs associated with the motif's TFs:

This plot shows correlation between observed signal intensity of a CRE associated with the transcription factor across all samples and activity of the motif.

For each TF, only the top 5 correlated CREs are shown.

CRE Gene Distance Association probability Pearson corr. coef. P-value Plot
RAD21chr8_117887202_1178874562240.5239900.627.5e-02Click!
RAD21chr8_117883179_11788333033450.190759-0.255.1e-01Click!
RAD21chr8_117892142_11789229351120.1715110.245.3e-01Click!
RAD21chr8_117884616_11788491518340.240314-0.215.8e-01Click!
RAD21chr8_117902849_117903000158190.1483650.196.2e-01Click!
SMC3chr10_112296305_112296649309720.132365-0.561.1e-01Click!
SMC3chr10_112295759_112296296314220.131407-0.472.1e-01Click!
SMC3chr10_112327463_1123281253450.8649140.412.7e-01Click!
SMC3chr10_112327217_1123274151330.9567320.284.7e-01Click!
SMC3chr10_112326670_1123270535880.7218030.225.6e-01Click!

Activity of the RAD21_SMC3 motif across conditions

Conditions sorted by the z-value of the RAD21_SMC3 motif activity

Move your cursor over a bar to see sample name and corresponding Z-value.

Top target CREs of the motif:

Cis Regulatory Element (CRE) Target Score Top associated gene Gene Info Distance of CRE to TSS CRE/Gene association probability
chr19_510720_510899 0.84 AC005775.2

2996
0.12
chr14_103571364_103571515 0.75 EXOC3L4
exocyst complex component 3-like 4
2414
0.25
chr19_4872699_4872850 0.71 ENSG00000264899
.
3950
0.13
chr16_23848456_23848777 0.69 PRKCB
protein kinase C, beta
72
0.98
chr10_90595544_90595695 0.68 ANKRD22
ankyrin repeat domain 22
15956
0.16
chr10_81903584_81903735 0.65 PLAC9
placenta-specific 9
11182
0.18
chr19_7744309_7744460 0.64 CTD-3214H19.16

997
0.26
chr11_728044_728195 0.64 AP006621.9

1072
0.28
chr20_30410751_30410929 0.64 MYLK2
myosin light chain kinase 2
3664
0.17
chr3_114582845_114583026 0.63 ZBTB20
zinc finger and BTB domain containing 20
104817
0.08
chr12_94543457_94543730 0.63 PLXNC1
plexin C1
1094
0.57
chr17_63133333_63133484 0.60 RGS9
regulator of G-protein signaling 9
158
0.97
chr1_33520793_33520944 0.59 AK2
adenylate kinase 2
18275
0.16
chr19_41076676_41076827 0.58 SHKBP1
SH3KBP1 binding protein 1
6006
0.15
chr1_152161161_152161312 0.58 FLG-AS1
FLG antisense RNA 1
591
0.7
chr10_82295880_82296244 0.57 RP11-137H2.4

364
0.84
chr19_42210710_42210868 0.56 CEACAM5
carcinoembryonic antigen-related cell adhesion molecule 5
1715
0.23
chr5_39217983_39218134 0.56 FYB
FYN binding protein
1607
0.52
chrX_40737289_40737555 0.56 MED14
mediator complex subunit 14
142639
0.04
chr16_46663412_46663563 0.53 SHCBP1
SHC SH2-domain binding protein 1
7949
0.18
chr17_43212649_43212800 0.53 ACBD4
acyl-CoA binding domain containing 4
290
0.8
chr17_63096707_63096868 0.53 RGS9
regulator of G-protein signaling 9
36779
0.14
chr10_4891951_4892102 0.52 AKR1E2
aldo-keto reductase family 1, member E2
10050
0.23
chr1_40265403_40265603 0.52 RP1-118J21.25

10855
0.13
chr6_13278547_13278698 0.52 RP1-257A7.4

4331
0.22
chr6_36259031_36259182 0.52 PNPLA1
patatin-like phospholipase domain containing 1
20869
0.16
chr14_102990897_102991048 0.52 ANKRD9
ankyrin repeat domain 9
14836
0.15
chr7_142937826_142938131 0.50 GSTK1
glutathione S-transferase kappa 1
3208
0.14
chr22_37595607_37595758 0.50 SSTR3
somatostatin receptor 3
11323
0.12
chr11_57226259_57226422 0.49 RTN4RL2
reticulon 4 receptor-like 2
1682
0.2
chr19_47808671_47808977 0.48 C5AR1
complement component 5a receptor 1
4307
0.16
chr1_26648089_26648240 0.48 UBXN11
UBX domain protein 11
3310
0.14
chr12_54399885_54400449 0.46 HOXC8
homeobox C8
2665
0.09
chr10_70853201_70853352 0.46 SRGN
serglycin
5402
0.21
chr6_159463785_159463936 0.46 TAGAP
T-cell activation RhoGTPase activating protein
2190
0.31
chr20_36919775_36919926 0.45 BPI
bactericidal/permeability-increasing protein
12675
0.15
chr11_65149415_65150138 0.45 SLC25A45
solute carrier family 25, member 45
68
0.95
chr12_131303541_131303831 0.44 ENSG00000238822
.
3788
0.22
chr20_31886970_31887121 0.44 BPIFB1
BPI fold containing family B, member 1
16104
0.16
chr11_111802560_111802798 0.44 ENSG00000238965
.
3555
0.13
chr22_42062744_42062895 0.43 ENSG00000207457
.
12896
0.1
chr11_67381317_67381845 0.43 NDUFV1
NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa
5884
0.1
chr5_118670778_118671030 0.43 TNFAIP8
tumor necrosis factor, alpha-induced protein 8
2034
0.35
chr2_176944534_176944961 0.42 EVX2
even-skipped homeobox 2
3894
0.12
chr22_24819614_24820020 0.42 ADORA2A
adenosine A2a receptor
218
0.94
chr18_75362846_75362997 0.42 ENSG00000252260
.
212602
0.02
chr11_113906864_113907142 0.42 ZBTB16
zinc finger and BTB domain containing 16
23312
0.18
chrX_48774424_48774575 0.42 PIM2
pim-2 oncogene
1487
0.23
chr19_11647018_11647169 0.41 CNN1
calponin 1, basic, smooth muscle
2439
0.14
chr8_124934794_124934968 0.41 FER1L6
fer-1-like 6 (C. elegans)
33344
0.2
chr3_16925560_16925711 0.40 PLCL2
phospholipase C-like 2
817
0.73
chr6_136547532_136547683 0.40 RP13-143G15.4

874
0.62
chr17_76133551_76133702 0.40 TMC6
transmembrane channel-like 6
5138
0.12
chr14_104367537_104367688 0.40 C14orf2
chromosome 14 open reading frame 2
20219
0.13
chrX_40403109_40403372 0.40 ENSG00000238730
.
8425
0.22
chr15_85114143_85114405 0.39 LINC00933
long intergenic non-protein coding RNA 933
119
0.76
chr17_36762681_36762941 0.39 SRCIN1
SRC kinase signaling inhibitor 1
628
0.62
chr8_57470509_57470758 0.39 RP11-17A4.2

68976
0.13
chr7_27219071_27219572 0.39 RP1-170O19.20
Uncharacterized protein
311
0.56
chr22_22292451_22292602 0.38 LL22NC03-86G7.1

83
0.83
chr1_150533351_150533580 0.38 ADAMTSL4-AS1
ADAMTSL4 antisense RNA 1
504
0.58
chr13_46734728_46734988 0.37 LCP1
lymphocyte cytosolic protein 1 (L-plastin)
7796
0.17
chr2_114006851_114007002 0.36 ENSG00000189223
.
1417
0.35
chr22_24836933_24837084 0.36 ADORA2A
adenosine A2a receptor
8200
0.18
chr19_2475398_2475867 0.36 GADD45B
growth arrest and DNA-damage-inducible, beta
493
0.74
chr13_34116896_34117047 0.36 STARD13
StAR-related lipid transfer (START) domain containing 13
192204
0.03
chr16_89307277_89307470 0.36 RP11-46C24.6

12273
0.11
chr16_81771661_81771865 0.36 PLCG2
phospholipase C, gamma 2 (phosphatidylinositol-specific)
939
0.7
chr10_95576079_95576230 0.35 LGI1
leucine-rich, glioma inactivated 1
58476
0.12
chr4_185185188_185185495 0.35 ENSG00000221523
.
3243
0.26
chr4_185926512_185926756 0.35 HELT
helt bHLH transcription factor
13361
0.23
chr11_62078778_62078929 0.35 SCGB1D4
secretoglobin, family 1D, member 4
12317
0.11
chr2_96930696_96931115 0.34 TMEM127
transmembrane protein 127
827
0.4
chr13_53542376_53542527 0.34 OLFM4
olfactomedin 4
60443
0.14
chr21_42741228_42741619 0.34 MX2
myxovirus (influenza virus) resistance 2 (mouse)
589
0.77
chr10_74454418_74454598 0.34 MCU
mitochondrial calcium uniporter
2131
0.29
chr3_196411919_196412186 0.34 ENSG00000201441
.
23783
0.11
chrX_152200996_152201209 0.34 PNMA3
paraneoplastic Ma antigen 3
23664
0.12
chr9_139923953_139924104 0.34 ABCA2
ATP-binding cassette, sub-family A (ABC1), member 2
1288
0.16
chr21_38362274_38362496 0.33 HLCS
holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)
139
0.95
chr19_39902575_39902778 0.33 PLEKHG2
pleckstrin homology domain containing, family G (with RhoGef domain) member 2
549
0.52
chr9_130547259_130547434 0.33 CDK9
cyclin-dependent kinase 9
612
0.4
chr22_37656956_37657107 0.32 RAC2
ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)
16543
0.14
chr19_16293563_16293744 0.32 FAM32A
family with sequence similarity 32, member A
2538
0.18
chr8_131314714_131314865 0.32 ASAP1
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
38394
0.21
chr2_131090199_131090350 0.32 IMP4
IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
9524
0.15
chr22_32061724_32061875 0.32 PISD
phosphatidylserine decarboxylase
3381
0.25
chr12_29360340_29360491 0.31 FAR2
fatty acyl CoA reductase 2
16183
0.25
chr11_64637195_64637670 0.31 EHD1
EH-domain containing 1
5706
0.11
chr2_231852070_231852221 0.31 SPATA3
spermatogenesis associated 3
8691
0.16
chrX_118863929_118864080 0.31 SOWAHD
sosondowah ankyrin repeat domain family member D
28572
0.13
chr6_134495232_134495950 0.31 SGK1
serum/glucocorticoid regulated kinase 1
411
0.86
chr6_138725225_138725500 0.31 HEBP2
heme binding protein 2
6
0.98
chrX_108956393_108956544 0.31 ACSL4
acyl-CoA synthetase long-chain family member 4
19974
0.21
chr16_57452807_57452958 0.31 CCL17
chemokine (C-C motif) ligand 17
14203
0.12
chr5_79603471_79603622 0.30 ENSG00000251828
.
1359
0.41
chr19_16493858_16494419 0.30 ENSG00000243745
.
15632
0.14
chr12_6647009_6647306 0.30 RP5-940J5.9

379
0.66
chr19_14545137_14545294 0.30 PKN1
protein kinase N1
910
0.44
chr20_56172175_56172326 0.30 ZBP1
Z-DNA binding protein 1
13071
0.21
chr7_75622802_75623087 0.30 POR
P450 (cytochrome) oxidoreductase
11715
0.16
chr2_68978993_68979334 0.30 ARHGAP25
Rho GTPase activating protein 25
17149
0.23
chr1_154971510_154971950 0.30 ZBTB7B
zinc finger and BTB domain containing 7B
3397
0.09
chrX_43609757_43609908 0.30 MAOA
monoamine oxidase A
94284
0.09
chr1_249101479_249101630 0.30 SH3BP5L
SH3-binding domain protein 5-like
9718
0.16
chr1_47903418_47903665 0.29 FOXD2
forkhead box D2
1852
0.27
chr12_94543061_94543212 0.29 PLXNC1
plexin C1
637
0.76
chr3_52305451_52305846 0.29 ENSG00000199150
.
3269
0.11
chr19_46272674_46272825 0.29 SIX5
SIX homeobox 5
265
0.73
chr16_66864896_66865106 0.29 NAE1
NEDD8 activating enzyme E1 subunit 1
101
0.95
chr1_202968488_202968639 0.29 TMEM183A
transmembrane protein 183A
7951
0.12
chr17_76418239_76418390 0.29 AC061992.1
Uncharacterized protein
4095
0.17
chr10_105127693_105127877 0.28 TAF5
TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
61
0.96
chr19_42302858_42303009 0.28 CEACAM3
carcinoembryonic antigen-related cell adhesion molecule 3
1848
0.24
chr8_23315005_23315175 0.28 ENTPD4
ectonucleoside triphosphate diphosphohydrolase 4
70
0.97
chr1_95320110_95320311 0.28 ENSG00000237416
.
772
0.66
chrX_52964079_52964300 0.28 FAM156A
family with sequence similarity 156, member A
21340
0.17
chr14_75981526_75981933 0.27 BATF
basic leucine zipper transcription factor, ATF-like
7039
0.21
chr11_8008537_8008688 0.27 EIF3F
eukaryotic translation initiation factor 3, subunit F
175
0.92
chr6_159125269_159125420 0.27 SYTL3
synaptotagmin-like 3
41149
0.13
chr19_49138973_49139430 0.27 DBP
D site of albumin promoter (albumin D-box) binding protein
1308
0.22
chr1_212838734_212839243 0.27 ENSG00000207491
.
26618
0.12
chrX_54666271_54666506 0.27 GNL3L
guanine nucleotide binding protein-like 3 (nucleolar)-like
109713
0.06
chr2_24713646_24713947 0.27 NCOA1
nuclear receptor coactivator 1
1005
0.64
chr9_81310465_81310616 0.27 PSAT1
phosphoserine aminotransferase 1
398481
0.01
chr2_152204695_152204846 0.27 TNFAIP6
tumor necrosis factor, alpha-induced protein 6
9336
0.17
chr1_2126776_2126927 0.27 C1orf86
chromosome 1 open reading frame 86
638
0.58
chr16_75032327_75032816 0.26 ZNRF1
zinc and ring finger 1, E3 ubiquitin protein ligase
357
0.89
chr19_41847643_41847794 0.26 TGFB1
transforming growth factor, beta 1
217
0.87
chr3_49943854_49944005 0.26 CTD-2330K9.3
Uncharacterized protein
2509
0.14
chr11_48131630_48131789 0.26 ENSG00000263693
.
13375
0.23
chr11_20408753_20408968 0.26 PRMT3
protein arginine methyltransferase 3
216
0.95
chr22_17652535_17653083 0.26 CECR5
cat eye syndrome chromosome region, candidate 5
6632
0.16
chr12_124377548_124377699 0.26 DNAH10
dynein, axonemal, heavy chain 10
15237
0.11
chr7_137583870_137584060 0.26 CREB3L2
cAMP responsive element binding protein 3-like 2
29050
0.18
chr11_723305_723456 0.26 AP006621.9

3667
0.1
chr14_50053552_50053772 0.26 RN7SL1
RNA, 7SL, cytoplasmic 1
364
0.55
chr17_38474976_38475621 0.26 RARA
retinoic acid receptor, alpha
761
0.52
chr14_105189941_105190399 0.26 ADSSL1
adenylosuccinate synthase like 1
353
0.81
chr11_2172831_2172982 0.26 IGF2
insulin-like growth factor 2 (somatomedin A)
2073
0.18
chr4_17550872_17551165 0.26 ENSG00000238536
.
20458
0.13
chr13_96130880_96131359 0.26 CLDN10
claudin 10
45261
0.16
chr17_78997611_78997870 0.26 BAIAP2
BAI1-associated protein 2
11210
0.12
chr9_19048749_19049283 0.26 RRAGA
Ras-related GTP binding A
356
0.81
chr2_28825128_28825469 0.26 PLB1
phospholipase B1
512
0.83
chr16_2390815_2390992 0.26 ABCA3
ATP-binding cassette, sub-family A (ABC1), member 3
156
0.92
chrX_153978145_153979054 0.25 GAB3
GRB2-associated binding protein 3
733
0.55
chr9_132244274_132244823 0.25 ENSG00000264298
.
3713
0.27
chr1_155942046_155942197 0.25 ARHGEF2
Rho/Rac guanine nucleotide exchange factor (GEF) 2
10
0.95
chr10_90343073_90343515 0.25 RNLS
renalase, FAD-dependent amine oxidase
324
0.86
chr22_17587383_17587676 0.25 CECR6
cat eye syndrome chromosome region, candidate 6
14614
0.14
chr1_149860084_149860235 0.25 HIST2H2AB
histone cluster 2, H2ab
693
0.28
chr3_128564835_128565137 0.25 RP11-723O4.2

19461
0.16
chr9_32572122_32572855 0.25 NDUFB6
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa
669
0.62
chr17_71817273_71817424 0.25 SDK2
sidekick cell adhesion molecule 2
177120
0.03
chr1_9202388_9202539 0.25 ENSG00000207865
.
9373
0.17
chr14_103589198_103589361 0.25 TNFAIP2
tumor necrosis factor, alpha-induced protein 2
519
0.76
chr11_45864761_45864912 0.25 CRY2
cryptochrome 2 (photolyase-like)
3833
0.19
chr4_141174038_141174780 0.24 SCOC
short coiled-coil protein
4031
0.26
chr10_134364622_134364773 0.24 INPP5A
inositol polyphosphate-5-phosphatase, 40kDa
13054
0.21
chr12_124018329_124018683 0.24 RILPL1
Rab interacting lysosomal protein-like 1
241
0.89
chr15_41198500_41199127 0.24 VPS18
vacuolar protein sorting 18 homolog (S. cerevisiae)
12148
0.11
chr16_67580972_67581123 0.24 FAM65A
family with sequence similarity 65, member A
2750
0.12
chr5_43105962_43106287 0.24 ZNF131
zinc finger protein 131
14861
0.18
chr1_145589458_145589609 0.24 NUDT17
nudix (nucleoside diphosphate linked moiety X)-type motif 17
94
0.94
chr16_30441543_30441841 0.24 DCTPP1
dCTP pyrophosphatase 1
296
0.74
chr6_26596047_26596198 0.24 ABT1
activator of basal transcription 1
1058
0.52
chr8_41685722_41686425 0.24 ENSG00000241834
.
11784
0.18
chr11_104914891_104915295 0.24 CARD16
caspase recruitment domain family, member 16
941
0.54
chr2_37502502_37502653 0.24 PRKD3
protein kinase D3
830
0.57
chr1_221055703_221055854 0.24 HLX
H2.0-like homeobox
1194
0.46
chr5_176882439_176883305 0.24 DBN1
drebrin 1
6518
0.1
chr7_148663870_148664057 0.24 ENSG00000252316
.
3556
0.17
chr1_11779431_11780126 0.24 AGTRAP
angiotensin II receptor-associated protein
16363
0.11
chr16_67193901_67194322 0.24 TRADD
TNFRSF1A-associated via death domain
90
0.63
chr8_22551556_22552015 0.24 EGR3
early growth response 3
970
0.44
chr17_74117442_74118068 0.24 EXOC7
exocyst complex component 7
98
0.95
chr3_136732781_136732932 0.24 IL20RB-AS1
IL20RB antisense RNA 1
31818
0.19
chr7_43878481_43878681 0.24 MRPS24
mitochondrial ribosomal protein S24
30575
0.14
chr6_44225465_44225616 0.23 SLC35B2
solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
249
0.84
chr9_100955406_100955634 0.23 CORO2A
coronin, actin binding protein, 2A
598
0.77
chr19_17416354_17416505 0.23 MRPL34
mitochondrial ribosomal protein L34
48
0.92
chr12_52417641_52417792 0.23 NR4A1
nuclear receptor subfamily 4, group A, member 1
1100
0.39
chr8_134307720_134307932 0.23 NDRG1
N-myc downstream regulated 1
953
0.67
chr13_78052035_78052755 0.23 SCEL
sciellin
57414
0.14
chr19_6481304_6482171 0.23 DENND1C
DENN/MADD domain containing 1C
27
0.95
chr5_179517510_179517661 0.23 RNF130
ring finger protein 130
18467
0.19
chr15_75077997_75078148 0.23 CSK
c-src tyrosine kinase
2813
0.16
chr2_238330261_238330412 0.23 AC112721.1
Uncharacterized protein
3583
0.24
chr1_152432501_152432949 0.23 CRNN
cornulin
45986
0.09
chr17_7146487_7146682 0.23 GABARAP
GABA(A) receptor-associated protein
495
0.51
chr6_110026512_110026663 0.23 FIG4
FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)
3664
0.28
chr2_25015571_25015910 0.22 CENPO
centromere protein O
274
0.69
chr8_25041176_25041327 0.22 DOCK5
dedicator of cytokinesis 5
987
0.56
chr19_43032396_43032749 0.22 CEACAM1
carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
26
0.98
chr17_7340388_7340539 0.22 RP11-104H15.9

379
0.55
chr2_113384253_113384510 0.22 SLC20A1
solute carrier family 20 (phosphate transporter), member 1
19053
0.16
chr3_63964903_63965338 0.22 ATXN7
ataxin 7
11700
0.14
chr1_21619720_21620176 0.22 RP5-1071N3.1

165
0.91
chr7_155137689_155137840 0.22 BLACE
B-cell acute lymphoblastic leukemia expressed
22865
0.16

Histogram of CRE-TSS distances for CREs targeted by :

Histogram of

Rank distribution of CRE target scores:

Histogram of target CRE score.

Distribution of target CREs across different genomic regions:

Weighted Piechart of Weighted Piechart of Weighted Piechart of

Network of associatons between targets according to the STRING database.

StringDB image

First level regulatory network of RAD21_SMC3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0035405 histone-threonine phosphorylation(GO:0035405)
0.2 0.5 GO:0031558 obsolete induction of apoptosis in response to chemical stimulus(GO:0031558)
0.1 0.3 GO:0032959 inositol trisphosphate biosynthetic process(GO:0032959)
0.1 0.3 GO:0009191 nucleoside diphosphate catabolic process(GO:0009134) ribonucleoside diphosphate catabolic process(GO:0009191)
0.1 0.3 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.1 0.2 GO:0051280 negative regulation of release of sequestered calcium ion into cytosol(GO:0051280) positive regulation of sequestering of calcium ion(GO:0051284) negative regulation of calcium ion transmembrane transport(GO:1903170)
0.1 0.2 GO:0006167 AMP biosynthetic process(GO:0006167)
0.1 0.2 GO:0060049 regulation of protein glycosylation(GO:0060049)
0.1 0.2 GO:0051503 adenine nucleotide transport(GO:0051503)
0.1 0.2 GO:0042268 regulation of cytolysis(GO:0042268)
0.0 0.2 GO:0097061 dendritic spine morphogenesis(GO:0060997) regulation of dendritic spine morphogenesis(GO:0061001) dendritic spine organization(GO:0097061)
0.0 0.1 GO:0045079 negative regulation of chemokine biosynthetic process(GO:0045079)
0.0 0.2 GO:0046628 positive regulation of insulin receptor signaling pathway(GO:0046628) positive regulation of cellular response to insulin stimulus(GO:1900078)
0.0 0.1 GO:0050961 detection of temperature stimulus involved in sensory perception(GO:0050961) detection of temperature stimulus involved in sensory perception of pain(GO:0050965)
0.0 0.3 GO:0032717 negative regulation of interleukin-8 production(GO:0032717)
0.0 0.2 GO:0006498 N-terminal protein lipidation(GO:0006498)
0.0 0.2 GO:0010944 negative regulation of transcription by competitive promoter binding(GO:0010944)
0.0 0.2 GO:0050774 negative regulation of dendrite morphogenesis(GO:0050774)
0.0 0.1 GO:0045630 positive regulation of T-helper 2 cell differentiation(GO:0045630)
0.0 0.1 GO:1903115 regulation of muscle filament sliding(GO:0032971) regulation of actin filament-based movement(GO:1903115)
0.0 0.3 GO:0000185 activation of MAPKKK activity(GO:0000185)
0.0 0.1 GO:0042635 positive regulation of hair cycle(GO:0042635) positive regulation of hair follicle development(GO:0051798)
0.0 0.2 GO:0060023 soft palate development(GO:0060023)
0.0 0.2 GO:0035246 peptidyl-arginine N-methylation(GO:0035246)
0.0 0.2 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.0 0.2 GO:0036473 intrinsic apoptotic signaling pathway in response to oxidative stress(GO:0008631) cell death in response to oxidative stress(GO:0036473)
0.0 0.1 GO:1903332 regulation of protein folding(GO:1903332)
0.0 0.8 GO:0007212 dopamine receptor signaling pathway(GO:0007212)
0.0 0.2 GO:0033160 positive regulation of protein import into nucleus, translocation(GO:0033160)
0.0 0.2 GO:0045116 protein neddylation(GO:0045116)
0.0 0.1 GO:0051541 elastin metabolic process(GO:0051541)
0.0 0.1 GO:0019987 obsolete negative regulation of anti-apoptosis(GO:0019987)
0.0 0.4 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.1 GO:0006434 seryl-tRNA aminoacylation(GO:0006434)
0.0 0.1 GO:0060267 positive regulation of respiratory burst(GO:0060267)
0.0 0.3 GO:0032770 positive regulation of monooxygenase activity(GO:0032770)
0.0 0.1 GO:0021913 regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification(GO:0021913)
0.0 0.1 GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.0 0.0 GO:0018076 N-terminal peptidyl-lysine acetylation(GO:0018076)
0.0 0.1 GO:0010508 positive regulation of autophagy(GO:0010508)
0.0 0.1 GO:0008628 hormone-mediated apoptotic signaling pathway(GO:0008628)
0.0 0.2 GO:1903078 positive regulation of establishment of protein localization to plasma membrane(GO:0090004) positive regulation of protein localization to plasma membrane(GO:1903078) positive regulation of protein localization to cell periphery(GO:1904377)
0.0 0.1 GO:0032914 positive regulation of transforming growth factor beta1 production(GO:0032914)
0.0 0.1 GO:0032007 negative regulation of TOR signaling(GO:0032007)
0.0 0.1 GO:1901984 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.0 0.1 GO:0002282 microglial cell activation involved in immune response(GO:0002282)
0.0 0.1 GO:0060996 dendritic spine development(GO:0060996)
0.0 0.1 GO:0034204 lipid translocation(GO:0034204) phospholipid translocation(GO:0045332)
0.0 0.1 GO:0060263 regulation of respiratory burst(GO:0060263)
0.0 0.1 GO:0060708 spongiotrophoblast differentiation(GO:0060708)
0.0 0.1 GO:0000301 retrograde transport, vesicle recycling within Golgi(GO:0000301)
0.0 0.1 GO:0035162 embryonic hemopoiesis(GO:0035162)
0.0 0.0 GO:0002281 macrophage activation involved in immune response(GO:0002281)
0.0 0.0 GO:0045835 negative regulation of meiotic nuclear division(GO:0045835)
0.0 0.1 GO:0043951 negative regulation of cAMP-mediated signaling(GO:0043951)
0.0 0.3 GO:0045408 regulation of interleukin-6 biosynthetic process(GO:0045408)
0.0 0.1 GO:0072386 plus-end-directed vesicle transport along microtubule(GO:0072383) plus-end-directed organelle transport along microtubule(GO:0072386)
0.0 0.1 GO:0006591 ornithine metabolic process(GO:0006591)
0.0 0.1 GO:0030502 negative regulation of bone mineralization(GO:0030502)
0.0 0.3 GO:0045744 negative regulation of G-protein coupled receptor protein signaling pathway(GO:0045744)
0.0 0.0 GO:0006154 adenosine catabolic process(GO:0006154)
0.0 0.2 GO:0007020 microtubule nucleation(GO:0007020)
0.0 0.1 GO:0048342 paraxial mesodermal cell differentiation(GO:0048342) paraxial mesodermal cell fate commitment(GO:0048343)
0.0 0.1 GO:0005997 xylulose metabolic process(GO:0005997)
0.0 0.1 GO:0060236 regulation of mitotic spindle organization(GO:0060236)
0.0 0.0 GO:0046101 hypoxanthine biosynthetic process(GO:0046101)
0.0 0.1 GO:0010107 potassium ion import(GO:0010107)
0.0 0.1 GO:0019388 galactose catabolic process(GO:0019388)
0.0 0.1 GO:0000132 establishment of mitotic spindle orientation(GO:0000132) establishment of spindle orientation(GO:0051294)
0.0 0.2 GO:0007026 negative regulation of microtubule depolymerization(GO:0007026)
0.0 0.1 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.0 0.1 GO:0010746 regulation of plasma membrane long-chain fatty acid transport(GO:0010746)
0.0 0.1 GO:0010759 positive regulation of macrophage chemotaxis(GO:0010759)
0.0 0.2 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.1 GO:0008611 ether lipid biosynthetic process(GO:0008611) glycerol ether biosynthetic process(GO:0046504) ether biosynthetic process(GO:1901503)
0.0 0.0 GO:0010642 negative regulation of platelet-derived growth factor receptor signaling pathway(GO:0010642)
0.0 0.1 GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation(GO:0000394) tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0 0.0 GO:0070935 3'-UTR-mediated mRNA stabilization(GO:0070935)
0.0 0.0 GO:0006565 L-serine catabolic process(GO:0006565)
0.0 0.1 GO:0019317 fucose catabolic process(GO:0019317) L-fucose metabolic process(GO:0042354) L-fucose catabolic process(GO:0042355)
0.0 0.1 GO:0031111 negative regulation of microtubule polymerization or depolymerization(GO:0031111)
0.0 0.0 GO:0035025 positive regulation of Rho protein signal transduction(GO:0035025)
0.0 0.0 GO:0007000 nucleolus organization(GO:0007000)
0.0 0.0 GO:0021530 spinal cord oligodendrocyte cell differentiation(GO:0021529) spinal cord oligodendrocyte cell fate specification(GO:0021530) oligodendrocyte cell fate specification(GO:0021778) glial cell fate specification(GO:0021780)
0.0 0.1 GO:0050687 negative regulation of defense response to virus(GO:0050687)
0.0 0.0 GO:1903959 regulation of anion transmembrane transport(GO:1903959)
0.0 0.1 GO:0060317 cardiac epithelial to mesenchymal transition(GO:0060317)
0.0 0.0 GO:0046940 nucleoside monophosphate phosphorylation(GO:0046940)
0.0 0.0 GO:0032627 interleukin-23 production(GO:0032627) regulation of interleukin-23 production(GO:0032667) positive regulation of interleukin-23 production(GO:0032747)
0.0 0.0 GO:0044240 multicellular organism lipid catabolic process(GO:0044240)
0.0 0.1 GO:0000281 mitotic cytokinesis(GO:0000281)
0.0 0.0 GO:0030309 poly-N-acetyllactosamine metabolic process(GO:0030309)
0.0 0.1 GO:0060028 convergent extension involved in axis elongation(GO:0060028)
0.0 0.1 GO:0030579 ubiquitin-dependent SMAD protein catabolic process(GO:0030579)
0.0 0.0 GO:0050765 negative regulation of phagocytosis(GO:0050765)
0.0 0.1 GO:0032528 microvillus assembly(GO:0030033) microvillus organization(GO:0032528)
0.0 0.0 GO:0006420 arginyl-tRNA aminoacylation(GO:0006420)
0.0 0.2 GO:0021522 spinal cord motor neuron differentiation(GO:0021522)
0.0 0.0 GO:0046121 deoxyribonucleoside catabolic process(GO:0046121)
0.0 0.0 GO:0042661 regulation of mesodermal cell fate specification(GO:0042661) regulation of mesoderm development(GO:2000380)
0.0 0.0 GO:0007008 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 0.0 GO:0002523 leukocyte migration involved in inflammatory response(GO:0002523)
0.0 0.0 GO:0050857 positive regulation of antigen receptor-mediated signaling pathway(GO:0050857)
0.0 0.1 GO:0006386 transcription elongation from RNA polymerase III promoter(GO:0006385) termination of RNA polymerase III transcription(GO:0006386)
0.0 0.0 GO:0046952 ketone body catabolic process(GO:0046952)
0.0 0.0 GO:0001911 negative regulation of leukocyte mediated cytotoxicity(GO:0001911)
0.0 0.0 GO:0007028 cytoplasm organization(GO:0007028)
0.0 0.0 GO:0035455 response to interferon-alpha(GO:0035455)
0.0 0.0 GO:0072162 mesenchymal cell differentiation involved in kidney development(GO:0072161) metanephric mesenchymal cell differentiation(GO:0072162) mesenchymal cell differentiation involved in renal system development(GO:2001012)
0.0 0.0 GO:0043117 positive regulation of vascular permeability(GO:0043117)
0.0 0.0 GO:0010815 bradykinin catabolic process(GO:0010815)
0.0 0.1 GO:0046655 folic acid metabolic process(GO:0046655)
0.0 0.0 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.0 GO:0033345 asparagine catabolic process(GO:0006530) asparagine catabolic process via L-aspartate(GO:0033345)
0.0 0.0 GO:0006528 asparagine metabolic process(GO:0006528)
0.0 0.2 GO:0006336 DNA replication-independent nucleosome assembly(GO:0006336) CENP-A containing nucleosome assembly(GO:0034080) DNA replication-independent nucleosome organization(GO:0034724) CENP-A containing chromatin organization(GO:0061641)
0.0 0.0 GO:0046835 carbohydrate phosphorylation(GO:0046835)
0.0 0.1 GO:0015886 heme transport(GO:0015886)
0.0 0.0 GO:0015015 heparan sulfate proteoglycan biosynthetic process, enzymatic modification(GO:0015015)
0.0 0.0 GO:0002323 natural killer cell activation involved in immune response(GO:0002323) natural killer cell degranulation(GO:0043320)
0.0 0.1 GO:0045008 depyrimidination(GO:0045008)
0.0 0.0 GO:0090400 stress-induced premature senescence(GO:0090400)
0.0 0.1 GO:0001967 suckling behavior(GO:0001967)
0.0 0.1 GO:1901797 negative regulation of DNA damage response, signal transduction by p53 class mediator(GO:0043518) negative regulation of signal transduction by p53 class mediator(GO:1901797)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0098984 asymmetric synapse(GO:0032279) neuron to neuron synapse(GO:0098984)
0.1 0.2 GO:0005896 interleukin-6 receptor complex(GO:0005896)
0.0 0.2 GO:0042599 lamellar body(GO:0042599)
0.0 0.2 GO:0042582 primary lysosome(GO:0005766) azurophil granule(GO:0042582)
0.0 0.3 GO:0005652 nuclear lamina(GO:0005652)
0.0 0.1 GO:0030008 TRAPP complex(GO:0030008)
0.0 0.3 GO:0034451 centriolar satellite(GO:0034451)
0.0 0.1 GO:0008282 ATP-sensitive potassium channel complex(GO:0008282)
0.0 0.1 GO:0042629 mast cell granule(GO:0042629)
0.0 0.4 GO:0000421 autophagosome membrane(GO:0000421)
0.0 0.2 GO:0000931 gamma-tubulin large complex(GO:0000931) gamma-tubulin ring complex(GO:0008274)
0.0 0.1 GO:0016939 kinesin II complex(GO:0016939)
0.0 0.1 GO:0031932 TORC2 complex(GO:0031932)
0.0 0.1 GO:0071204 histone pre-mRNA 3'end processing complex(GO:0071204)
0.0 0.0 GO:0000125 PCAF complex(GO:0000125)
0.0 0.8 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 0.3 GO:0033276 transcription factor TFTC complex(GO:0033276)
0.0 0.3 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.1 GO:0005719 nuclear euchromatin(GO:0005719)
0.0 0.0 GO:0008537 proteasome activator complex(GO:0008537)
0.0 0.1 GO:0016589 NURF complex(GO:0016589)
0.0 0.1 GO:0019907 cyclin-dependent protein kinase activating kinase holoenzyme complex(GO:0019907)
0.0 0.2 GO:0005858 axonemal dynein complex(GO:0005858)
0.0 0.1 GO:0030904 retromer complex(GO:0030904)
0.0 0.0 GO:0005589 collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647)
0.0 0.1 GO:0071817 MMXD complex(GO:0071817)
0.0 0.1 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.0 GO:0005899 insulin receptor complex(GO:0005899)
0.0 0.0 GO:0019908 nuclear cyclin-dependent protein kinase holoenzyme complex(GO:0019908)
0.0 0.2 GO:0005762 organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.1 GO:0031045 dense core granule(GO:0031045)
0.0 0.1 GO:0072357 PTW/PP1 phosphatase complex(GO:0072357)
0.0 0.1 GO:0031262 Ndc80 complex(GO:0031262)
0.0 0.1 GO:0071547 piP-body(GO:0071547)
0.0 0.0 GO:0031265 CD95 death-inducing signaling complex(GO:0031265)
0.0 0.2 GO:0008023 transcription elongation factor complex(GO:0008023)
0.0 0.1 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 0.1 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.0 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371)
0.0 0.1 GO:0000782 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.0 0.0 GO:0032045 guanyl-nucleotide exchange factor complex(GO:0032045)
0.0 0.0 GO:0031428 box C/D snoRNP complex(GO:0031428)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0035184 histone threonine kinase activity(GO:0035184)
0.1 0.5 GO:0001609 G-protein coupled adenosine receptor activity(GO:0001609)
0.1 0.2 GO:0050253 retinyl-palmitate esterase activity(GO:0050253)
0.1 0.3 GO:0032552 deoxyribonucleotide binding(GO:0032552)
0.1 0.2 GO:0005346 purine ribonucleotide transmembrane transporter activity(GO:0005346)
0.1 0.2 GO:0001849 complement component C1q binding(GO:0001849)
0.1 0.2 GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity(GO:0035242)
0.1 0.2 GO:0008321 Ral guanyl-nucleotide exchange factor activity(GO:0008321)
0.1 0.3 GO:0009374 biotin binding(GO:0009374)
0.0 0.3 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.2 GO:0019788 NEDD8 transferase activity(GO:0019788)
0.0 0.1 GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719)
0.0 0.1 GO:0004687 myosin light chain kinase activity(GO:0004687)
0.0 0.2 GO:0003960 NADPH:quinone reductase activity(GO:0003960)
0.0 0.3 GO:0030676 Rac guanyl-nucleotide exchange factor activity(GO:0030676)
0.0 0.2 GO:0004897 ciliary neurotrophic factor receptor activity(GO:0004897)
0.0 0.2 GO:0015355 secondary active monocarboxylate transmembrane transporter activity(GO:0015355)
0.0 0.2 GO:0005114 type II transforming growth factor beta receptor binding(GO:0005114)
0.0 0.1 GO:0042978 ornithine decarboxylase activator activity(GO:0042978)
0.0 0.2 GO:0070513 death domain binding(GO:0070513)
0.0 0.3 GO:0008641 small protein activating enzyme activity(GO:0008641)
0.0 0.1 GO:0008429 phosphatidylethanolamine binding(GO:0008429)
0.0 0.4 GO:0005159 insulin-like growth factor receptor binding(GO:0005159)
0.0 0.2 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.3 GO:0017069 snRNA binding(GO:0017069)
0.0 0.1 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.0 0.2 GO:0030274 LIM domain binding(GO:0030274)
0.0 0.1 GO:0032052 bile acid binding(GO:0032052)
0.0 0.1 GO:0052659 inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659)
0.0 0.1 GO:0004911 interleukin-2 receptor activity(GO:0004911)
0.0 0.4 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.0 0.1 GO:0015272 ATP-activated inward rectifier potassium channel activity(GO:0015272)
0.0 0.1 GO:0051636 obsolete Gram-negative bacterial cell surface binding(GO:0051636)
0.0 0.1 GO:0032138 single base insertion or deletion binding(GO:0032138)
0.0 0.3 GO:0004697 protein kinase C activity(GO:0004697)
0.0 0.0 GO:0030368 interleukin-17 receptor activity(GO:0030368)
0.0 0.6 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.2 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 0.1 GO:0004994 somatostatin receptor activity(GO:0004994)
0.0 0.1 GO:0003726 double-stranded RNA adenosine deaminase activity(GO:0003726)
0.0 0.1 GO:0008190 eukaryotic initiation factor 4E binding(GO:0008190)
0.0 0.1 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.0 0.2 GO:0016986 obsolete transcription initiation factor activity(GO:0016986)
0.0 0.1 GO:0001875 lipopolysaccharide receptor activity(GO:0001875)
0.0 0.1 GO:0008140 cAMP response element binding protein binding(GO:0008140)
0.0 0.1 GO:0008494 translation activator activity(GO:0008494)
0.0 0.1 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0 0.1 GO:0003708 retinoic acid receptor activity(GO:0003708)
0.0 0.1 GO:0031702 type 1 angiotensin receptor binding(GO:0031702)
0.0 0.0 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.0 0.1 GO:0034713 type I transforming growth factor beta receptor binding(GO:0034713)
0.0 0.1 GO:0004982 N-formyl peptide receptor activity(GO:0004982)
0.0 0.1 GO:0034450 ubiquitin-ubiquitin ligase activity(GO:0034450) ubiquitin protein ligase activity(GO:0061630) ubiquitin-like protein ligase activity(GO:0061659)
0.0 0.2 GO:0042301 phosphate ion binding(GO:0042301)
0.0 0.0 GO:0050265 RNA uridylyltransferase activity(GO:0050265)
0.0 0.1 GO:0015245 fatty acid transporter activity(GO:0015245)
0.0 0.3 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.0 GO:0004995 tachykinin receptor activity(GO:0004995)
0.0 0.1 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 0.0 GO:0000400 four-way junction DNA binding(GO:0000400)
0.0 0.1 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.0 0.0 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.0 0.1 GO:0050431 transforming growth factor beta binding(GO:0050431)
0.0 0.1 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.1 GO:0050656 3'-phosphoadenosine 5'-phosphosulfate binding(GO:0050656)
0.0 0.1 GO:0016635 oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor(GO:0016635)
0.0 0.0 GO:0008853 exodeoxyribonuclease III activity(GO:0008853)
0.0 0.0 GO:0004949 cannabinoid receptor activity(GO:0004949)
0.0 0.0 GO:0070644 vitamin D response element binding(GO:0070644)
0.0 0.0 GO:0004814 arginine-tRNA ligase activity(GO:0004814)
0.0 0.2 GO:0043027 cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027)
0.0 0.1 GO:0008191 metalloendopeptidase inhibitor activity(GO:0008191)
0.0 0.0 GO:0008131 primary amine oxidase activity(GO:0008131)
0.0 0.0 GO:0030911 TPR domain binding(GO:0030911)
0.0 0.1 GO:0008432 JUN kinase binding(GO:0008432)
0.0 0.1 GO:0016500 protein-hormone receptor activity(GO:0016500)
0.0 0.1 GO:0004467 long-chain fatty acid-CoA ligase activity(GO:0004467)
0.0 0.0 GO:0004706 JUN kinase kinase kinase activity(GO:0004706)
0.0 0.1 GO:0015232 heme transporter activity(GO:0015232)
0.0 0.1 GO:0004767 sphingomyelin phosphodiesterase activity(GO:0004767)
0.0 0.0 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.0 0.1 GO:0030506 ankyrin binding(GO:0030506)
0.0 0.1 GO:0070567 cytidylyltransferase activity(GO:0070567)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.1 PID INTEGRIN5 PATHWAY Beta5 beta6 beta7 and beta8 integrin cell surface interactions
0.1 0.8 PID TCR JNK PATHWAY JNK signaling in the CD4+ TCR pathway
0.0 0.5 SA MMP CYTOKINE CONNECTION Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix.
0.0 0.6 PID CONE PATHWAY Visual signal transduction: Cones
0.0 0.0 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.0 0.1 PID WNT SIGNALING PATHWAY Wnt signaling network
0.0 0.2 PID P38 GAMMA DELTA PATHWAY Signaling mediated by p38-gamma and p38-delta
0.0 0.0 PID SYNDECAN 1 PATHWAY Syndecan-1-mediated signaling events
0.0 0.1 PID NFAT 3PATHWAY Role of Calcineurin-dependent NFAT signaling in lymphocytes
0.0 0.3 ST TUMOR NECROSIS FACTOR PATHWAY Tumor Necrosis Factor Pathway.
0.0 0.5 PID IL6 7 PATHWAY IL6-mediated signaling events
0.0 0.3 PID P38 MKK3 6PATHWAY p38 MAPK signaling pathway
0.0 0.0 PID IL8 CXCR1 PATHWAY IL8- and CXCR1-mediated signaling events
0.0 0.6 PID FOXO PATHWAY FoxO family signaling
0.0 0.6 PID TCR PATHWAY TCR signaling in naïve CD4+ T cells
0.0 0.3 PID AR NONGENOMIC PATHWAY Nongenotropic Androgen signaling
0.0 0.2 PID PRL SIGNALING EVENTS PATHWAY Signaling events mediated by PRL
0.0 0.2 PID RETINOIC ACID PATHWAY Retinoic acid receptors-mediated signaling
0.0 0.1 PID ER NONGENOMIC PATHWAY Plasma membrane estrogen receptor signaling
0.0 0.0 ST STAT3 PATHWAY STAT3 Pathway
0.0 0.1 PID IGF1 PATHWAY IGF1 pathway
0.0 0.3 PID THROMBIN PAR1 PATHWAY PAR1-mediated thrombin signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.7 REACTOME TRAFFICKING OF GLUR2 CONTAINING AMPA RECEPTORS Genes involved in Trafficking of GluR2-containing AMPA receptors
0.0 0.0 REACTOME ACTIVATED TAK1 MEDIATES P38 MAPK ACTIVATION Genes involved in activated TAK1 mediates p38 MAPK activation
0.0 0.6 REACTOME OTHER SEMAPHORIN INTERACTIONS Genes involved in Other semaphorin interactions
0.0 0.5 REACTOME NUCLEOTIDE LIKE PURINERGIC RECEPTORS Genes involved in Nucleotide-like (purinergic) receptors
0.0 0.1 REACTOME NEGATIVE REGULATION OF THE PI3K AKT NETWORK Genes involved in Negative regulation of the PI3K/AKT network
0.0 0.3 REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS Genes involved in Signal regulatory protein (SIRP) family interactions
0.0 0.2 REACTOME SPRY REGULATION OF FGF SIGNALING Genes involved in Spry regulation of FGF signaling
0.0 0.2 REACTOME IL 6 SIGNALING Genes involved in Interleukin-6 signaling
0.0 0.5 REACTOME DOWNREGULATION OF TGF BETA RECEPTOR SIGNALING Genes involved in Downregulation of TGF-beta receptor signaling
0.0 0.6 REACTOME GPVI MEDIATED ACTIVATION CASCADE Genes involved in GPVI-mediated activation cascade
0.0 0.0 REACTOME SCFSKP2 MEDIATED DEGRADATION OF P27 P21 Genes involved in SCF(Skp2)-mediated degradation of p27/p21
0.0 0.2 REACTOME GAP JUNCTION DEGRADATION Genes involved in Gap junction degradation
0.0 0.2 REACTOME EXTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Extrinsic Pathway for Apoptosis
0.0 0.1 REACTOME GAB1 SIGNALOSOME Genes involved in GAB1 signalosome
0.0 0.3 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.0 0.2 REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS Genes involved in Purine ribonucleoside monophosphate biosynthesis
0.0 0.2 REACTOME SIGNAL ATTENUATION Genes involved in Signal attenuation
0.0 0.1 REACTOME RECRUITMENT OF NUMA TO MITOTIC CENTROSOMES Genes involved in Recruitment of NuMA to mitotic centrosomes
0.0 0.0 REACTOME TRANSPORT OF RIBONUCLEOPROTEINS INTO THE HOST NUCLEUS Genes involved in Transport of Ribonucleoproteins into the Host Nucleus
0.0 0.2 REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity
0.0 0.1 REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
0.0 0.3 REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING Genes involved in Negative regulators of RIG-I/MDA5 signaling
0.0 0.2 REACTOME RAP1 SIGNALLING Genes involved in Rap1 signalling
0.0 0.4 REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES Genes involved in Transport of vitamins, nucleosides, and related molecules
0.0 0.2 REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY Genes involved in Post-chaperonin tubulin folding pathway
0.0 0.1 REACTOME REGULATION OF KIT SIGNALING Genes involved in Regulation of KIT signaling
0.0 0.3 REACTOME PI3K EVENTS IN ERBB4 SIGNALING Genes involved in PI3K events in ERBB4 signaling
0.0 0.3 REACTOME ELONGATION ARREST AND RECOVERY Genes involved in Elongation arrest and recovery
0.0 0.1 REACTOME P38MAPK EVENTS Genes involved in p38MAPK events
0.0 0.0 REACTOME CD28 DEPENDENT PI3K AKT SIGNALING Genes involved in CD28 dependent PI3K/Akt signaling
0.0 0.3 REACTOME BASIGIN INTERACTIONS Genes involved in Basigin interactions
0.0 0.6 REACTOME INTERFERON ALPHA BETA SIGNALING Genes involved in Interferon alpha/beta signaling
0.0 0.1 REACTOME RIP MEDIATED NFKB ACTIVATION VIA DAI Genes involved in RIP-mediated NFkB activation via DAI
0.0 0.1 REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX Genes involved in CDC6 association with the ORC:origin complex
0.0 0.4 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.0 0.1 REACTOME PACKAGING OF TELOMERE ENDS Genes involved in Packaging Of Telomere Ends
0.0 0.0 REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE Genes involved in mRNA Decay by 3' to 5' Exoribonuclease
0.0 0.1 REACTOME NFKB IS ACTIVATED AND SIGNALS SURVIVAL Genes involved in NF-kB is activated and signals survival