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ENCODE: H3K4me3 ChIP-Seq of primary human cells
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CREMA is a free online tool that recognizes most important transcription factors that change the chromatin state across different samples.

Results for SOX30

Z-value: 0.86

Motif logo

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Transcription factors associated with SOX30

Gene Symbol Gene ID Gene Info
ENSG00000039600.6 SOX30

Correlations of motif activity and signal intensity at CREs associated with the motif's TFs:

This plot shows correlation between observed signal intensity of a CRE associated with the transcription factor across all samples and activity of the motif.

For each TF, only the top 5 correlated CREs are shown.

CRE Gene Distance Association probability Pearson corr. coef. P-value Plot
SOX30chr5_157078570_1570787747000.630058-0.732.4e-02Click!
SOX30chr5_157078809_1570793183090.871837-0.655.6e-02Click!
SOX30chr5_157097546_1570976978670.3786340.551.3e-01Click!
SOX30chr5_157097802_1570988141800.587499-0.511.6e-01Click!
SOX30chr5_157079325_157079476280.971191-0.265.0e-01Click!

Activity of the SOX30 motif across conditions

Conditions sorted by the z-value of the SOX30 motif activity

Move your cursor over a bar to see sample name and corresponding Z-value.

Top target CREs of the motif:

Cis Regulatory Element (CRE) Target Score Top associated gene Gene Info Distance of CRE to TSS CRE/Gene association probability
chr12_91570174_91570436 0.41 DCN
decorin
2024
0.44
chr9_73095232_73095769 0.32 KLF9
Kruppel-like factor 9
65960
0.12
chr7_93465582_93465846 0.32 TFPI2
tissue factor pathway inhibitor 2
53768
0.12
chr14_73881950_73882101 0.32 NUMB
numb homolog (Drosophila)
5246
0.21
chr19_34359259_34359976 0.30 ENSG00000240626
.
58913
0.13
chr10_62547859_62548079 0.30 CDK1
cyclin-dependent kinase 1
8058
0.28
chr18_56528219_56528370 0.29 ZNF532
zinc finger protein 532
1538
0.39
chr16_3501012_3501163 0.28 NAA60
N(alpha)-acetyltransferase 60, NatF catalytic subunit
5644
0.13
chr11_82608630_82608781 0.28 C11orf82
chromosome 11 open reading frame 82
2312
0.28
chr7_98719396_98719594 0.26 SMURF1
SMAD specific E3 ubiquitin protein ligase 1
22147
0.2
chr15_92404035_92404308 0.25 SLCO3A1
solute carrier organic anion transporter family, member 3A1
6820
0.27
chr7_81679403_81679554 0.25 MIR1255B1
microRNA 1255b-1
40970
0.18
chr18_46460407_46461027 0.24 SMAD7
SMAD family member 7
14158
0.24
chr7_15723868_15724269 0.24 MEOX2
mesenchyme homeobox 2
2369
0.37
chr13_86099472_86099623 0.23 ENSG00000207012
.
59441
0.17
chr4_75409052_75409203 0.23 RP11-727M10.2

66845
0.1
chr9_18476160_18476529 0.22 ADAMTSL1
ADAMTS-like 1
2113
0.45
chr2_190075884_190076035 0.22 COL5A2
collagen, type V, alpha 2
31354
0.2
chr3_187984581_187985052 0.22 LPP
LIM domain containing preferred translocation partner in lipoma
27164
0.24
chr5_180682825_180682976 0.22 AC008443.1
CDNA: FLJ23158 fis, clone LNG09623; Uncharacterized protein
180
0.86
chr4_82326915_82327066 0.22 RASGEF1B
RasGEF domain family, member 1B
65400
0.13
chr13_24807615_24808021 0.22 SPATA13
spermatogenesis associated 13
18014
0.17
chr8_40602961_40603112 0.22 ZMAT4
zinc finger, matrin-type 4
143028
0.05
chr2_227590884_227591406 0.22 ENSG00000263363
.
67636
0.11
chr6_126124183_126124375 0.22 NCOA7
nuclear receptor coactivator 7
7002
0.19
chr1_153582582_153582782 0.21 S100A16
S100 calcium binding protein A16
862
0.35
chr4_36257830_36257981 0.21 RP11-431M7.3

235
0.94
chr11_46402058_46403020 0.21 MDK
midkine (neurite growth-promoting factor 2)
52
0.96
chrX_39949292_39950247 0.21 BCOR
BCL6 corepressor
6887
0.33
chr3_154959930_154960081 0.21 MME-AS1
MME antisense RNA 1
58931
0.15
chr12_110993281_110993585 0.20 PPTC7
PTC7 protein phosphatase homolog (S. cerevisiae)
27692
0.12
chr2_50371364_50371541 0.20 NRXN1
neurexin 1
125041
0.06
chr4_38705158_38705309 0.20 RP11-617D20.1

38729
0.12
chr7_17080807_17081087 0.20 AGR3
anterior gradient 3
159336
0.04
chr4_118249233_118249384 0.20 TRAM1L1
translocation associated membrane protein 1-like 1
242572
0.02
chr8_97145200_97145762 0.20 GDF6
growth differentiation factor 6
27539
0.21
chr10_4358088_4358256 0.20 ENSG00000207124
.
198972
0.03
chr3_113460155_113460306 0.20 NAA50
N(alpha)-acetyltransferase 50, NatE catalytic subunit
1796
0.34
chr7_116164164_116164509 0.20 CAV1
caveolin 1, caveolae protein, 22kDa
503
0.76
chr3_56929337_56929488 0.20 ARHGEF3
Rho guanine nucleotide exchange factor (GEF) 3
21087
0.22
chr1_161477171_161477322 0.19 FCGR2A
Fc fragment of IgG, low affinity IIa, receptor (CD32)
2026
0.25
chr18_61496009_61496309 0.19 SERPINB2
serpin peptidase inhibitor, clade B (ovalbumin), member 2
42767
0.13
chr19_45959494_45959730 0.19 ERCC1
excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)
5629
0.12
chr2_237884917_237885068 0.19 ENSG00000202341
.
38956
0.18
chr9_128521294_128521792 0.19 PBX3
pre-B-cell leukemia homeobox 3
11065
0.27
chr4_54564515_54564666 0.19 RP11-317M11.1

2522
0.3
chr8_25442204_25442403 0.18 CDCA2
cell division cycle associated 2
125588
0.06
chr22_30588637_30588788 0.18 RP3-438O4.4

14386
0.14
chr6_25360210_25360380 0.18 ENSG00000207490
.
23532
0.16
chr12_69809879_69810030 0.18 ENSG00000266185
.
15271
0.18
chr2_238070262_238070413 0.18 COPS8
COP9 signalosome subunit 8
75751
0.09
chr2_189842191_189842342 0.18 ENSG00000221502
.
552
0.78
chr2_113537340_113537491 0.18 IL1A
interleukin 1, alpha
4752
0.19
chr6_7692698_7692863 0.18 BMP6
bone morphogenetic protein 6
34250
0.21
chr2_226029710_226029861 0.18 DOCK10
dedicator of cytokinesis 10
122626
0.06
chr18_38705827_38705978 0.18 ENSG00000238333
.
653117
0.0
chr12_18318254_18318405 0.18 RERGL
RERG/RAS-like
75202
0.12
chr1_155469525_155469676 0.18 ENSG00000235919
.
62264
0.07
chr12_65550856_65551007 0.17 LEMD3
LEM domain containing 3
12420
0.21
chr11_88067311_88067773 0.17 CTSC
cathepsin C
3359
0.37
chr14_41685035_41685186 0.17 ENSG00000221695
.
133387
0.06
chr10_112627670_112627821 0.17 PDCD4
programmed cell death 4 (neoplastic transformation inhibitor)
3820
0.17
chr10_123909165_123909405 0.17 TACC2
transforming, acidic coiled-coil containing protein 2
13656
0.27
chr3_157822422_157822707 0.17 SHOX2
short stature homeobox 2
519
0.7
chr12_119617823_119618008 0.17 HSPB8
heat shock 22kDa protein 8
520
0.73
chr12_14569534_14569685 0.17 ATF7IP
activating transcription factor 7 interacting protein
238
0.95
chr6_64062151_64062302 0.17 LGSN
lengsin, lens protein with glutamine synthetase domain
32344
0.24
chr2_175743756_175743907 0.17 CHN1
chimerin 1
31352
0.19
chr11_111047528_111047679 0.17 C11orf53
chromosome 11 open reading frame 53
79104
0.09
chr3_29991791_29991942 0.17 RBMS3-AS1
RBMS3 antisense RNA 1
16219
0.29
chr7_133055658_133055809 0.17 ENSG00000238844
.
108248
0.07
chr5_126348889_126349040 0.17 MARCH3
membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
17536
0.24
chr10_29229083_29229234 0.17 ENSG00000199402
.
65722
0.13
chr9_13568681_13569117 0.17 MPDZ
multiple PDZ domain protein
289310
0.01
chrX_50556610_50557434 0.17 SHROOM4
shroom family member 4
22
0.99
chr8_79468522_79468695 0.16 PKIA
protein kinase (cAMP-dependent, catalytic) inhibitor alpha
34858
0.19
chr3_10315902_10316053 0.16 TATDN2
TatD DNase domain containing 2
3373
0.15
chr9_133713242_133713393 0.16 ABL1
c-abl oncogene 1, non-receptor tyrosine kinase
2864
0.3
chr10_30346002_30346153 0.16 KIAA1462
KIAA1462
2376
0.44
chr17_67650795_67650946 0.16 MAP2K6
mitogen-activated protein kinase kinase 6
152300
0.04
chr13_36931940_36932091 0.16 ENSG00000266047
.
2087
0.25
chr7_120664705_120664856 0.16 CPED1
cadherin-like and PC-esterase domain containing 1
35104
0.16
chr3_56810315_56810466 0.16 ARHGEF3
Rho guanine nucleotide exchange factor (GEF) 3
705
0.79
chr10_114714851_114715858 0.16 RP11-57H14.2

3720
0.26
chr2_73021663_73021814 0.16 EXOC6B
exocyst complex component 6B
31432
0.17
chr7_92467890_92468041 0.16 CDK6
cyclin-dependent kinase 6
2057
0.31
chr16_3911841_3912078 0.16 CREBBP
CREB binding protein
18162
0.21
chr5_141218824_141218975 0.16 PCDH1
protocadherin 1
30255
0.16
chr7_19136246_19136397 0.15 AC003986.6

15776
0.16
chr2_162019757_162019908 0.15 TANK
TRAF family member-associated NFKB activator
2595
0.29
chr15_52944945_52945096 0.15 FAM214A
family with sequence similarity 214, member A
773
0.64
chr3_74475331_74475482 0.15 CNTN3
contactin 3 (plasmacytoma associated)
94885
0.09
chr20_60594176_60594409 0.15 TAF4
TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
11675
0.2
chr2_19995754_19995974 0.15 TTC32
tetratricopeptide repeat domain 32
105538
0.07
chr6_70501419_70501570 0.15 LMBRD1
LMBR1 domain containing 1
937
0.71
chr16_79732693_79732844 0.15 ENSG00000221330
.
29134
0.25
chr10_44789701_44789852 0.15 RP11-20J15.3

619
0.82
chrX_115371447_115371702 0.15 AGTR2
angiotensin II receptor, type 2
69599
0.13
chr21_34602307_34603720 0.15 IFNAR2
interferon (alpha, beta and omega) receptor 2
299
0.87
chr6_1613704_1614304 0.15 FOXC1
forkhead box C1
3323
0.37
chr5_40487521_40487672 0.15 ENSG00000265615
.
167176
0.03
chr12_54698226_54698575 0.15 COPZ1
coatomer protein complex, subunit zeta 1
3414
0.1
chr1_36183617_36184771 0.15 C1orf216
chromosome 1 open reading frame 216
879
0.53
chr1_167132672_167132823 0.15 RP11-277B15.2

31970
0.14
chr6_45463009_45463160 0.14 RUNX2
runt-related transcription factor 2
72862
0.11
chr1_54232914_54233120 0.14 ENSG00000201003
.
3809
0.22
chr5_134844161_134844312 0.14 NEUROG1
neurogenin 1
27403
0.14
chr12_19375788_19375939 0.14 PLEKHA5
pleckstrin homology domain containing, family A member 5
13995
0.22
chr1_210057563_210057765 0.14 DIEXF
digestive organ expansion factor homolog (zebrafish)
45514
0.13
chr9_113940701_113941000 0.14 ENSG00000212409
.
81157
0.1
chr3_70854632_70854783 0.14 ENSG00000206939
.
2794
0.39
chr7_91195255_91195601 0.14 FZD1
frizzled family receptor 1
301645
0.01
chr10_33239282_33239433 0.14 ITGB1
integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
5234
0.31
chr4_77506894_77507309 0.14 ENSG00000265314
.
10397
0.17
chr3_173460576_173460750 0.14 NLGN1
neuroligin 1
138274
0.05
chr17_14642934_14643085 0.14 HS3ST3B1
heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
438609
0.01
chr1_231648231_231648382 0.14 RP11-295G20.2

15695
0.19
chr10_18448210_18448361 0.14 CACNB2
calcium channel, voltage-dependent, beta 2 subunit
18176
0.26
chr12_56959274_56959425 0.14 ENSG00000201579
.
22953
0.12
chr15_57509304_57509455 0.14 TCF12
transcription factor 12
2249
0.41
chr3_158486598_158486991 0.14 RP11-379F4.8

13542
0.14
chr7_39504844_39505021 0.14 POU6F2-AS1
POU6F2 antisense RNA 1
58987
0.12
chr2_37814036_37814187 0.14 AC006369.2

13168
0.25
chr18_10101229_10101442 0.14 ENSG00000263630
.
96141
0.08
chr11_17369748_17369899 0.14 NCR3LG1
natural killer cell cytotoxicity receptor 3 ligand 1
3450
0.21
chr6_85482826_85483217 0.14 TBX18
T-box 18
8784
0.3
chr1_170641859_170642010 0.14 PRRX1
paired related homeobox 1
8856
0.29
chr15_40111813_40111964 0.14 RP11-37C7.2

4258
0.19
chr12_11916833_11916984 0.14 ETV6
ets variant 6
11473
0.29
chr8_13347325_13347476 0.14 DLC1
deleted in liver cancer 1
9350
0.24
chr1_35654542_35654817 0.14 SFPQ
splicing factor proline/glutamine-rich
4070
0.21
chr5_56600937_56601088 0.14 CTD-2023N9.1

89875
0.08
chr9_71802023_71802174 0.14 TJP2
tight junction protein 2
12888
0.25
chr19_58488964_58489115 0.14 C19orf18
chromosome 19 open reading frame 18
3137
0.15
chr2_45004607_45004758 0.14 ENSG00000252896
.
4587
0.34
chr9_75192112_75192273 0.14 TMC1
transmembrane channel-like 1
37424
0.19
chr1_235115156_235115307 0.14 ENSG00000239690
.
75298
0.1
chr9_26170624_26170775 0.14 ENSG00000266429
.
443424
0.01
chr6_129203821_129204789 0.14 LAMA2
laminin, alpha 2
37
0.99
chr17_8263383_8263534 0.14 AC135178.1
HCG1985372; Uncharacterized protein; cDNA FLJ37541 fis, clone BRCAN2026340
80
0.93
chr5_142709588_142709739 0.14 NR3C1
nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
70754
0.12
chr6_130391698_130391967 0.13 L3MBTL3
l(3)mbt-like 3 (Drosophila)
50130
0.15
chr3_124510640_124510940 0.13 ITGB5-AS1
ITGB5 antisense RNA 1
10788
0.18
chr2_148122279_148122430 0.13 ENSG00000238860
.
40815
0.16
chr3_188311777_188312056 0.13 LPP
LIM domain containing preferred translocation partner in lipoma
15093
0.2
chr3_164178912_164179063 0.13 ENSG00000221755
.
119858
0.07
chr15_75870175_75871107 0.13 PTPN9
protein tyrosine phosphatase, non-receptor type 9
989
0.47
chr18_9918630_9918781 0.13 VAPA
VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
4646
0.2
chr4_34171764_34171915 0.13 ENSG00000263814
.
216620
0.02
chr10_36066984_36067135 0.13 FZD8
frizzled family receptor 8
136697
0.05
chr3_120215962_120216316 0.13 FSTL1
follistatin-like 1
46039
0.16
chr6_160106825_160107100 0.13 SOD2
superoxide dismutase 2, mitochondrial
7298
0.18
chr1_225923826_225924038 0.13 RP11-145A3.2

44
0.97
chr17_73386962_73387166 0.13 GRB2
growth factor receptor-bound protein 2
2673
0.13
chr1_36549458_36550287 0.13 TEKT2
tektin 2 (testicular)
196
0.92
chr4_6909699_6909850 0.13 TBC1D14
TBC1 domain family, member 14
1195
0.49
chr2_225734023_225734174 0.13 DOCK10
dedicator of cytokinesis 10
52729
0.18
chr7_152157267_152157418 0.13 ENSG00000221454
.
21036
0.18
chr6_83077930_83078081 0.13 TPBG
trophoblast glycoprotein
4044
0.35
chr15_94841194_94841722 0.13 MCTP2
multiple C2 domains, transmembrane 2
28
0.99
chr4_183413823_183413976 0.13 TENM3
teneurin transmembrane protein 3
43747
0.17
chr8_77690391_77690542 0.13 ZFHX4
zinc finger homeobox 4
74186
0.11
chr2_1711742_1712354 0.13 PXDN
peroxidasin homolog (Drosophila)
15706
0.26
chr4_26022444_26022665 0.13 SMIM20
small integral membrane protein 20
106623
0.07
chr7_35936307_35936458 0.13 SEPT7
septin 7
16856
0.2
chr9_132246124_132246361 0.13 ENSG00000264298
.
5407
0.24
chr6_169426238_169426389 0.13 XXyac-YX65C7_A.2

187036
0.03
chr12_118626563_118627015 0.13 TAOK3
TAO kinase 3
1538
0.42
chr2_134484282_134484433 0.13 ENSG00000200708
.
130695
0.05
chr5_77935751_77935902 0.13 LHFPL2
lipoma HMGIC fusion partner-like 2
8822
0.32
chr8_42054040_42054280 0.13 PLAT
plasminogen activator, tissue
944
0.52
chr9_81972295_81972446 0.13 TLE4
transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
214318
0.03
chr3_168866326_168866618 0.13 MECOM
MDS1 and EVI1 complex locus
950
0.73
chr21_28339413_28339697 0.13 ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif, 5
723
0.73
chr19_10678474_10679697 0.13 CDKN2D
cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
569
0.54
chr16_27005073_27005435 0.13 RP11-673P17.2

73925
0.12
chr12_81616950_81617101 0.13 ENSG00000265227
.
64858
0.11
chr17_28687356_28687507 0.13 ENSG00000201255
.
50
0.96
chr3_149371362_149371801 0.13 WWTR1-AS1
WWTR1 antisense RNA 1
3226
0.2
chr9_90427762_90427913 0.13 XXyac-YM21GA2.6

24303
0.14
chr13_41540297_41540448 0.13 ELF1
E74-like factor 1 (ets domain transcription factor)
16046
0.18
chr14_47696792_47696943 0.13 MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2
95826
0.09
chr16_19769806_19769957 0.12 CTD-2380F24.1

7485
0.18
chr13_108536105_108536256 0.12 FAM155A
family with sequence similarity 155, member A
17097
0.25
chr18_66506011_66506162 0.12 CCDC102B
coiled-coil domain containing 102B
2085
0.36
chr6_39398889_39399040 0.12 KIF6
kinesin family member 6
125
0.98
chr15_38556619_38556770 0.12 SPRED1
sprouty-related, EVH1 domain containing 1
11312
0.31
chr2_62705563_62705714 0.12 ENSG00000241625
.
12675
0.23
chr5_57793978_57794129 0.12 GAPT
GRB2-binding adaptor protein, transmembrane
3986
0.24
chr4_81195528_81195918 0.12 FGF5
fibroblast growth factor 5
7930
0.26
chr14_27311618_27311769 0.12 NOVA1-AS1
NOVA1 antisense RNA 1 (head to head)
60319
0.13
chr5_39275351_39275502 0.12 FYB
FYN binding protein
796
0.75
chr7_111720888_111721301 0.12 DOCK4
dedicator of cytokinesis 4
76908
0.11
chr12_116510107_116510258 0.12 ENSG00000200665
.
10193
0.25
chr3_87000039_87000329 0.12 VGLL3
vestigial like 3 (Drosophila)
39668
0.23
chr10_8343377_8343528 0.12 GATA3
GATA binding protein 3
246683
0.02
chr1_247714015_247714166 0.12 GCSAML
germinal center-associated, signaling and motility-like
1641
0.26
chr4_169769420_169769799 0.12 RP11-635L1.3

15521
0.19
chr8_108344303_108344567 0.12 ANGPT1
angiopoietin 1
4315
0.34
chr7_132339761_132340479 0.12 AC009365.3

6567
0.23

Histogram of CRE-TSS distances for CREs targeted by :

Histogram of

Rank distribution of CRE target scores:

Histogram of target CRE score.

Distribution of target CREs across different genomic regions:

Weighted Piechart of Weighted Piechart of Weighted Piechart of

Network of associatons between targets according to the STRING database.

StringDB image

First level regulatory network of SOX30

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0019800 peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800)
0.0 0.1 GO:0032224 positive regulation of synaptic transmission, cholinergic(GO:0032224)
0.0 0.1 GO:0030210 heparin biosynthetic process(GO:0030210)
0.0 0.1 GO:0035455 response to interferon-alpha(GO:0035455)
0.0 0.1 GO:0010193 response to ozone(GO:0010193)
0.0 0.2 GO:0031061 negative regulation of histone methylation(GO:0031061)
0.0 0.1 GO:0001757 somite specification(GO:0001757)
0.0 0.1 GO:0090084 negative regulation of inclusion body assembly(GO:0090084)
0.0 0.1 GO:0051497 negative regulation of stress fiber assembly(GO:0051497)
0.0 0.1 GO:0060398 regulation of growth hormone receptor signaling pathway(GO:0060398)
0.0 0.0 GO:0021823 cerebral cortex tangential migration using cell-cell interactions(GO:0021823) substrate-dependent cerebral cortex tangential migration(GO:0021825) postnatal olfactory bulb interneuron migration(GO:0021827)
0.0 0.1 GO:0070208 protein heterotrimerization(GO:0070208)
0.0 0.1 GO:0007221 positive regulation of transcription of Notch receptor target(GO:0007221)
0.0 0.1 GO:0014834 skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration(GO:0014834)
0.0 0.2 GO:0033137 negative regulation of peptidyl-serine phosphorylation(GO:0033137)
0.0 0.1 GO:0035385 Roundabout signaling pathway(GO:0035385)
0.0 0.1 GO:0032808 lacrimal gland development(GO:0032808)
0.0 0.1 GO:0034501 protein localization to kinetochore(GO:0034501)
0.0 0.1 GO:1902101 positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.0 0.1 GO:0021670 lateral ventricle development(GO:0021670)
0.0 0.1 GO:0048149 behavioral response to ethanol(GO:0048149)
0.0 0.0 GO:0030538 embryonic genitalia morphogenesis(GO:0030538)
0.0 0.1 GO:0006474 N-terminal protein amino acid acetylation(GO:0006474)
0.0 0.1 GO:0051409 response to nitrosative stress(GO:0051409)
0.0 0.0 GO:0045578 negative regulation of B cell differentiation(GO:0045578)
0.0 0.0 GO:0090116 DNA methylation on cytosine(GO:0032776) C-5 methylation of cytosine(GO:0090116)
0.0 0.1 GO:0090030 regulation of steroid hormone biosynthetic process(GO:0090030)
0.0 0.0 GO:0002430 complement receptor mediated signaling pathway(GO:0002430)
0.0 0.1 GO:0042023 regulation of DNA endoreduplication(GO:0032875) negative regulation of DNA endoreduplication(GO:0032876) DNA endoreduplication(GO:0042023)
0.0 0.0 GO:0060665 regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling(GO:0060665)
0.0 0.1 GO:0048755 branching morphogenesis of a nerve(GO:0048755)
0.0 0.2 GO:0030325 adrenal gland development(GO:0030325)
0.0 0.1 GO:0006975 DNA damage induced protein phosphorylation(GO:0006975)
0.0 0.0 GO:0010572 positive regulation of platelet activation(GO:0010572)
0.0 0.1 GO:0030853 negative regulation of granulocyte differentiation(GO:0030853)
0.0 0.1 GO:0045898 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898)
0.0 0.1 GO:0060039 pericardium development(GO:0060039)
0.0 0.1 GO:0032926 negative regulation of activin receptor signaling pathway(GO:0032926)
0.0 0.1 GO:0030579 ubiquitin-dependent SMAD protein catabolic process(GO:0030579)
0.0 0.1 GO:0060216 definitive hemopoiesis(GO:0060216)
0.0 0.1 GO:0034214 protein hexamerization(GO:0034214)
0.0 0.0 GO:0001778 plasma membrane repair(GO:0001778)
0.0 0.1 GO:0008228 opsonization(GO:0008228)
0.0 0.0 GO:0016576 histone dephosphorylation(GO:0016576)
0.0 0.0 GO:0048702 embryonic neurocranium morphogenesis(GO:0048702)
0.0 0.0 GO:0070050 neuron cellular homeostasis(GO:0070050)
0.0 0.1 GO:0007185 transmembrane receptor protein tyrosine phosphatase signaling pathway(GO:0007185)
0.0 0.0 GO:0051387 negative regulation of neurotrophin TRK receptor signaling pathway(GO:0051387)
0.0 0.0 GO:0030091 protein repair(GO:0030091)
0.0 0.0 GO:0048867 stem cell fate commitment(GO:0048865) stem cell fate determination(GO:0048867)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0005589 collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647)
0.0 0.2 GO:0005606 laminin-1 complex(GO:0005606)
0.0 0.1 GO:0033270 paranode region of axon(GO:0033270)
0.0 0.1 GO:0070852 cell body fiber(GO:0070852)
0.0 0.3 GO:0009925 basal plasma membrane(GO:0009925)
0.0 0.2 GO:0005583 fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)
0.0 0.1 GO:0030992 intraciliary transport particle B(GO:0030992)
0.0 0.0 GO:0042629 mast cell granule(GO:0042629)
0.0 0.0 GO:0016942 insulin-like growth factor binding protein complex(GO:0016942) growth factor complex(GO:0036454)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0001098 basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099)
0.0 0.1 GO:0004904 interferon receptor activity(GO:0004904)
0.0 0.1 GO:0003696 satellite DNA binding(GO:0003696)
0.0 0.1 GO:0019959 C-X-C chemokine binding(GO:0019958) interleukin-8 binding(GO:0019959)
0.0 0.1 GO:0051371 muscle alpha-actinin binding(GO:0051371)
0.0 0.1 GO:0005173 stem cell factor receptor binding(GO:0005173)
0.0 0.1 GO:0004948 calcitonin receptor activity(GO:0004948)
0.0 0.1 GO:0050998 nitric-oxide synthase binding(GO:0050998)
0.0 0.1 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.1 GO:0055077 gap junction hemi-channel activity(GO:0055077)
0.0 0.1 GO:0033130 acetylcholine receptor binding(GO:0033130)
0.0 0.1 GO:0019864 IgG binding(GO:0019864)
0.0 0.0 GO:0004875 complement receptor activity(GO:0004875)
0.0 0.1 GO:0017166 vinculin binding(GO:0017166)
0.0 0.0 GO:0005152 interleukin-1 receptor antagonist activity(GO:0005152)
0.0 0.0 GO:0035198 miRNA binding(GO:0035198)
0.0 0.1 GO:0005149 interleukin-1 receptor binding(GO:0005149)
0.0 0.1 GO:0031419 cobalamin binding(GO:0031419)
0.0 0.0 GO:0042285 UDP-xylosyltransferase activity(GO:0035252) xylosyltransferase activity(GO:0042285)
0.0 0.0 GO:0043515 kinetochore binding(GO:0043515)
0.0 0.1 GO:0030676 Rac guanyl-nucleotide exchange factor activity(GO:0030676)
0.0 0.0 GO:0008475 procollagen-lysine 5-dioxygenase activity(GO:0008475)
0.0 0.1 GO:0048185 activin binding(GO:0048185)
0.0 0.0 GO:0048495 Roundabout binding(GO:0048495)
0.0 0.0 GO:0015016 [heparan sulfate]-glucosamine N-sulfotransferase activity(GO:0015016)
0.0 0.1 GO:0070700 BMP receptor binding(GO:0070700)
0.0 0.2 GO:0004012 phospholipid-translocating ATPase activity(GO:0004012)
0.0 0.1 GO:0048407 platelet-derived growth factor binding(GO:0048407)
0.0 0.1 GO:0004982 N-formyl peptide receptor activity(GO:0004982)
0.0 0.0 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.0 0.0 GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity(GO:0004616)
0.0 0.0 GO:0015038 glutathione disulfide oxidoreductase activity(GO:0015038)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 PID INTEGRIN4 PATHWAY Alpha6 beta4 integrin-ligand interactions

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN Genes involved in Platelet Adhesion to exposed collagen
0.0 0.2 REACTOME CS DS DEGRADATION Genes involved in CS/DS degradation
0.0 0.1 REACTOME NEURONAL SYSTEM Genes involved in Neuronal System
0.0 0.1 REACTOME RAF MAP KINASE CASCADE Genes involved in RAF/MAP kinase cascade
0.0 0.1 REACTOME NOTCH HLH TRANSCRIPTION PATHWAY Genes involved in Notch-HLH transcription pathway