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ENCODE: H3K4me3 ChIP-Seq of different mouse tissues during embryonic development
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CREMA is a free online tool that recognizes most important transcription factors that change the chromatin state across different samples.

Results for Nfkb2

Z-value: 0.68

Motif logo

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Transcription factors associated with Nfkb2

Gene Symbol Gene ID Gene Info
ENSMUSG00000025225.8 Nfkb2

Correlations of motif activity and signal intensity at CREs associated with the motif's TFs:

This plot shows correlation between observed signal intensity of a CRE associated with the transcription factor across all samples and activity of the motif.

For each TF, only the top 5 correlated CREs are shown.

CRE Gene Distance Association probability Pearson corr. coef. P-value Plot
Nfkb2chr19_46308370_4630917526510.1211700.373.8e-03Click!
Nfkb2chr19_46309210_4630955332600.1073300.273.5e-02Click!
Nfkb2chr19_46309835_4631002338080.0995370.181.6e-01Click!
Nfkb2chr19_46304094_463042451510.883432-0.162.2e-01Click!
Nfkb2chr19_46308192_4630834321460.1410290.142.8e-01Click!

Activity of the Nfkb2 motif across conditions

Conditions sorted by the z-value of the Nfkb2 motif activity

Move your cursor over a bar to see sample name and corresponding Z-value.

Top target CREs of the motif:

Cis Regulatory Element (CRE) Target Score Top associated gene Gene Info Distance of CRE to TSS CRE/Gene association probability
chr8_70119024_70120981 3.07 Ncan
neurocan
871
0.35
chr2_143546820_143547517 3.02 Pcsk2os1
proprotein convertase subtilisin/kexin type 2, opposite strand 1
669
0.53
chr14_93888463_93888979 2.58 Pcdh9
protocadherin 9
11
0.99
chr2_65929929_65930575 2.51 Csrnp3
cysteine-serine-rich nuclear protein 3
115
0.97
chr17_25567606_25567996 2.20 Sox8
SRY (sex determining region Y)-box 8
2413
0.13
chr15_12739006_12740203 2.13 Pdzd2
PDZ domain containing 2
320
0.86
chr13_105444000_105445296 2.05 Htr1a
5-hydroxytryptamine (serotonin) receptor 1A
1009
0.69
chr14_67236008_67239452 1.95 Ebf2
early B cell factor 2
3086
0.21
chr9_73967774_73969221 1.93 Unc13c
unc-13 homolog C
469
0.88
chr5_49284738_49286021 1.80 Kcnip4
Kv channel interacting protein 4
280
0.92
chr2_38354292_38355594 1.75 Lhx2
LIM homeobox protein 2
1141
0.41
chr1_178530778_178530954 1.70 Kif26b
kinesin family member 26B
1741
0.44
chr5_142961791_142962040 1.68 Fscn1
fascin actin-bundling protein 1
1038
0.49
chr15_59319527_59320112 1.67 Sqle
squalene epoxidase
4712
0.18
chrX_135210129_135210918 1.51 Tceal6
transcription elongation factor A (SII)-like 6
164
0.93
chr13_112289274_112289896 1.50 Ankrd55
ankyrin repeat domain 55
765
0.56
chr2_27027194_27027995 1.49 Slc2a6
solute carrier family 2 (facilitated glucose transporter), member 6
315
0.79
chr1_124045018_124046369 1.48 Dpp10
dipeptidylpeptidase 10
134
0.98
chr3_89522754_89523224 1.44 Kcnn3
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
2825
0.22
chr11_96987508_96988742 1.43 Sp2
Sp2 transcription factor
5166
0.1
chr10_114800824_114801254 1.43 Trhde
TRH-degrading enzyme
331
0.73
chr17_57148993_57149872 1.35 Cd70
CD70 antigen
345
0.79
chr12_79130802_79131751 1.34 Arg2
arginase type II
499
0.64
chr18_69347722_69348433 1.31 Tcf4
transcription factor 4
179
0.97
chr8_83902724_83903561 1.30 Adgrl1
adhesion G protein-coupled receptor L1
2407
0.18
chr7_79507205_79507895 1.29 Mir9-3
microRNA 9-3
2286
0.14
chr15_78717784_78718525 1.25 Elfn2
leucine rich repeat and fibronectin type III, extracellular 2
41
0.97
chr10_80179768_80180422 1.19 Efna2
ephrin A2
613
0.51
chr15_102959654_102960750 1.19 Hoxc11
homeobox C11
5775
0.08
chr6_110645148_110646464 1.17 Gm20387
predicted gene 20387
110
0.67
chr5_28465805_28466194 1.15 9530036O11Rik
RIKEN cDNA 9530036O11Rik
985
0.44
chr11_11115362_11116603 1.15 Vwc2
von Willebrand factor C domain containing 2
131
0.97
chr1_74802832_74804032 1.11 Wnt10a
wingless-type MMTV integration site family, member 10A
10069
0.11
chr4_140647825_140648405 1.10 Arhgef10l
Rho guanine nucleotide exchange factor (GEF) 10-like
635
0.68
chr15_98951099_98951690 1.09 Gm49450
predicted gene, 49450
2157
0.13
chr14_88469423_88470289 1.09 Pcdh20
protocadherin 20
1490
0.47
chr11_93100564_93101210 1.07 Car10
carbonic anhydrase 10
1597
0.56
chrX_102069269_102069420 1.07 Rtl5
retrotransposon Gag like 5
1744
0.27
chr11_96297868_96298678 1.06 Hoxb6
homeobox B6
898
0.3
chr7_131966504_131967699 1.06 Gpr26
G protein-coupled receptor 26
641
0.75
chr18_83635368_83635622 1.05 Gm31621
predicted gene, 31621
2431
0.28
chr7_45869909_45870408 1.03 Grin2d
glutamate receptor, ionotropic, NMDA2D (epsilon 4)
271
0.77
chr1_19104045_19104891 1.03 Gm15825
predicted gene 15825
372
0.8
chr5_90758918_90760166 1.00 Cxcl5
chemokine (C-X-C motif) ligand 5
164
0.91
chr11_102081725_102082491 0.99 Mpp2
membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
311
0.79
chr7_25007594_25007745 0.95 Atp1a3
ATPase, Na+/K+ transporting, alpha 3 polypeptide
1711
0.22
chr14_58150040_58150734 0.94 Gm17109
predicted gene 17109
44258
0.14
chr11_69800320_69800731 0.93 Fgf11
fibroblast growth factor 11
1191
0.19
chr3_88458101_88459325 0.92 Sema4a
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
163
0.88
chr4_154649328_154649479 0.92 Gm27202
predicted gene 27202
3702
0.15
chr7_74012361_74013617 0.92 St8sia2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
685
0.71
chr15_73668219_73668370 0.92 1700010B13Rik
RIKEN cDNA 1700010B13 gene
22420
0.14
chr8_126140788_126141154 0.91 Slc35f3
solute carrier family 35, member F3
1589
0.49
chr2_18056600_18056751 0.91 1810059C17Rik
RIKEN cDNA 1810059C17 gene
62
0.92
chr2_152951095_152951539 0.90 Dusp15
dual specificity phosphatase-like 15
139
0.93
chr19_16135060_16135656 0.89 Gnaq
guanine nucleotide binding protein, alpha q polypeptide
2062
0.35
chr11_34315414_34316667 0.89 Insyn2b
inhibitory synaptic factor family member 2B
1218
0.45
chr5_90902965_90904167 0.88 Cxcl2
chemokine (C-X-C motif) ligand 2
305
0.84
chr11_98980727_98980878 0.88 Gjd3
gap junction protein, delta 3
2214
0.17
chr9_13301218_13302233 0.87 Maml2
mastermind like transcriptional coactivator 2
3768
0.19
chr1_177640225_177640394 0.87 2310043L19Rik
RIKEN cDNA 2310043L19 gene
2634
0.25
chr2_163602380_163602998 0.87 Ttpal
tocopherol (alpha) transfer protein-like
126
0.95
chr6_55455310_55456012 0.86 Adcyap1r1
adenylate cyclase activating polypeptide 1 receptor 1
3484
0.26
chr3_66976883_66977353 0.86 Shox2
short stature homeobox 2
1329
0.41
chr8_26848235_26848453 0.84 2310008N11Rik
RIKEN cDNA 2310008N11 gene
6345
0.21
chr1_5018491_5020565 0.84 Rgs20
regulator of G-protein signaling 20
11
0.98
chr3_66219854_66220300 0.83 Ptx3
pentraxin related gene
167
0.95
chr2_33626557_33626708 0.83 Lmx1b
LIM homeobox transcription factor 1 beta
5651
0.16
chr2_33593442_33593593 0.83 Gm38011
predicted gene, 38011
20881
0.15
chr7_126848132_126848884 0.83 Doc2a
double C2, alpha
253
0.76
chr11_58866994_58868023 0.83 2810021J22Rik
RIKEN cDNA 2810021J22 gene
241
0.79
chr12_98577628_98578516 0.83 Kcnk10
potassium channel, subfamily K, member 10
238
0.9
chr5_96373327_96373478 0.81 Fras1
Fraser extracellular matrix complex subunit 1
553
0.83
chr5_113490881_113491656 0.81 Wscd2
WSC domain containing 2
516
0.83
chr1_12991432_12992703 0.80 Slco5a1
solute carrier organic anion transporter family, member 5A1
583
0.78
chr10_18341675_18342214 0.78 Gm18942
predicted gene, 18942
4703
0.22
chr10_81251490_81251641 0.76 Matk
megakaryocyte-associated tyrosine kinase
1370
0.17
chr12_89811728_89812295 0.74 Nrxn3
neurexin III
397
0.92
chr7_43489310_43490670 0.74 Iglon5
IgLON family member 5
85
0.92
chr1_119051596_119052429 0.73 Gli2
GLI-Kruppel family member GLI2
1327
0.47
chr11_44632092_44632243 0.73 Ebf1
early B cell factor 1
10406
0.17
chr11_116809628_116809779 0.72 Mxra7
matrix-remodelling associated 7
18300
0.1
chr17_34038427_34040461 0.72 Col11a2
collagen, type XI, alpha 2
7
0.9
chr16_97168581_97168970 0.72 Dscam
DS cell adhesion molecule
1977
0.47
chr1_172482102_172483290 0.72 Igsf9
immunoglobulin superfamily, member 9
382
0.75
chr7_45795764_45796042 0.72 Lmtk3
lemur tyrosine kinase 3
8155
0.07
chr1_191224508_191225332 0.71 D730003I15Rik
RIKEN cDNA D730003I15 gene
446
0.76
chr3_3308823_3309359 0.70 Gm8747
predicted gene 8747
42064
0.2
chr19_10356843_10356994 0.70 Syt7
synaptotagmin VII
32172
0.12
chr15_103519597_103520253 0.69 Pde1b
phosphodiesterase 1B, Ca2+-calmodulin dependent
3793
0.17
chr2_102450383_102451888 0.69 Fjx1
four jointed box 1
1364
0.51
chr4_126277866_126278017 0.69 Col8a2
collagen, type VIII, alpha 2
8852
0.12
chr15_103105344_103105529 0.69 Gm28265
predicted gene 28265
834
0.41
chr2_150361232_150361675 0.68 3300002I08Rik
RIKEN cDNA 3300002I08 gene
1280
0.35
chr15_84301565_84301928 0.68 Gm22890
predicted gene, 22890
21606
0.13
chr10_59221970_59222690 0.67 Sowahc
sosondowah ankyrin repeat domain family member C
377
0.54
chr6_86051805_86052622 0.66 Add2
adducin 2 (beta)
35
0.96
chr2_77816072_77817449 0.66 Zfp385b
zinc finger protein 385B
56
0.98
chr11_118568846_118570341 0.66 Rbfox3
RNA binding protein, fox-1 homolog (C. elegans) 3
317
0.91
chr9_119092635_119093830 0.66 Plcd1
phospholipase C, delta 1
270
0.87
chr15_81696545_81697665 0.65 Chadl
chondroadherin-like
182
0.9
chr4_102087325_102088593 0.64 Pde4b
phosphodiesterase 4B, cAMP specific
218
0.95
chr15_102980564_102980932 0.63 Hoxc9
homeobox C9
3716
0.09
chr8_111742802_111743840 0.63 Bcar1
breast cancer anti-estrogen resistance 1
488
0.8
chr18_42401018_42401905 0.63 Pou4f3
POU domain, class 4, transcription factor 3
6386
0.2
chr10_127187269_127187420 0.63 Arhgef25
Rho guanine nucleotide exchange factor (GEF) 25
121
0.91
chr2_27122326_27122477 0.62 Adamtsl2
ADAMTS-like 2
17738
0.11
chr19_55749292_55750940 0.62 Tcf7l2
transcription factor 7 like 2, T cell specific, HMG box
7271
0.3
chr9_41474743_41475732 0.62 Mir100hg
Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
177
0.72
chr11_3910794_3911677 0.62 Slc35e4
solute carrier family 35, member E4
3429
0.13
chr13_42709240_42709536 0.61 Phactr1
phosphatase and actin regulator 1
155
0.97
chr4_129966249_129966400 0.61 1700003M07Rik
RIKEN cDNA 1700003M07 gene
5516
0.14
chr17_28144735_28145006 0.61 Scube3
signal peptide, CUB domain, EGF-like 3
2344
0.18
chr12_72844062_72844595 0.60 Gm33785
predicted gene, 33785
26616
0.16
chr11_97627602_97627753 0.60 Epop
elongin BC and polycomb repressive complex 2 associated protein
2025
0.18
chr2_25580658_25582212 0.60 Ajm1
apical junction component 1
293
0.72
chr5_125158383_125159717 0.59 Ncor2
nuclear receptor co-repressor 2
20003
0.19
chrX_73411302_73411931 0.59 Zfp92
zinc finger protein 92
56
0.66
chr19_59468752_59469845 0.58 Emx2
empty spiracles homeobox 2
6496
0.17
chr7_45417677_45418655 0.58 AC151602.1
luteinizing hormone beta
187
0.8
chr1_129275124_129275766 0.58 Thsd7b
thrombospondin, type I, domain containing 7B
1960
0.39
chr10_94311604_94312850 0.58 Tmcc3
transmembrane and coiled coil domains 3
90
0.97
chr5_67633750_67634259 0.57 Gm42735
predicted gene 42735
1304
0.3
chr11_5255980_5256131 0.57 Gm25142
predicted gene, 25142
4205
0.19
chr2_25460160_25461436 0.57 Paxx
non-homologous end joining factor
129
0.89
chr11_109297097_109298424 0.57 Rgs9
regulator of G-protein signaling 9
306
0.9
chr7_46099780_46100565 0.56 Kcnj11
potassium inwardly rectifying channel, subfamily J, member 11
65
0.95
chr19_5093217_5093838 0.56 Yif1a
Yip1 interacting factor homolog A (S. cerevisiae)
4599
0.07
chr7_101419184_101419783 0.56 Pde2a
phosphodiesterase 2A, cGMP-stimulated
2208
0.21
chr16_91012571_91012722 0.55 4930404I05Rik
RIKEN cDNA 4930404I05 gene
1075
0.29
chr10_102160210_102160629 0.55 Mgat4c
MGAT4 family, member C
1340
0.6
chr10_127619791_127621096 0.55 Lrp1
low density lipoprotein receptor-related protein 1
479
0.65
chr9_106456260_106457377 0.54 Pcbp4
poly(rC) binding protein 4
721
0.42
chr4_121039154_121040672 0.53 Col9a2
collagen, type IX, alpha 2
165
0.92
chr18_38216257_38217428 0.53 2010320O07Rik
RIKEN cDNA 2010320O07 gene
3138
0.16
chr2_32311532_32312331 0.53 Dnm1
dynamin 1
958
0.33
chr11_35120980_35122375 0.52 Slit3
slit guidance ligand 3
453
0.89
chr5_117087628_117088305 0.52 Suds3
suppressor of defective silencing 3 homolog (S. cerevisiae)
10845
0.15
chr2_152907676_152907827 0.52 Mylk2
myosin, light polypeptide kinase 2, skeletal muscle
3601
0.15
chr11_98950065_98950283 0.52 Gm22061
predicted gene, 22061
3730
0.13
chr6_37297951_37298469 0.52 Dgki
diacylglycerol kinase, iota
1427
0.53
chr5_121823215_121823366 0.52 Mir7031
microRNA 7031
4017
0.12
chr2_35619545_35620730 0.52 Dab2ip
disabled 2 interacting protein
1844
0.38
chr2_27460067_27460218 0.52 Brd3
bromodomain containing 3
3974
0.16
chr2_32759044_32759195 0.51 Tor2a
torsin family 2, member A
1176
0.25
chr4_155252152_155252689 0.51 Faap20
Fanconi anemia core complex associated protein 20
1724
0.32
chr16_45723390_45724960 0.50 Tagln3
transgelin 3
433
0.77
chr5_99726980_99727219 0.50 Rasgef1b
RasGEF domain family, member 1B
1713
0.32
chr16_91229951_91230102 0.50 Olig2
oligodendrocyte transcription factor 2
4569
0.14
chr16_77236731_77239778 0.50 Mir99ahg
Mir99a and Mirlet7c-1 host gene (non-protein coding)
1935
0.4
chr8_105699776_105699927 0.50 Acd
adrenocortical dysplasia
30
0.93
chr8_24296964_24297158 0.49 Gm45164
predicted gene 45164
62375
0.11
chr10_127488582_127488733 0.49 R3hdm2
R3H domain containing 2
3175
0.14
chr11_96697035_96697186 0.49 Skap1
src family associated phosphoprotein 1
11125
0.17
chrX_7863281_7863432 0.49 Otud5
OTU domain containing 5
7629
0.08
chr1_34801752_34802642 0.49 Arhgef4
Rho guanine nucleotide exchange factor (GEF) 4
403
0.78
chr7_80320493_80320644 0.48 Rccd1
RCC1 domain containing 1
471
0.66
chr5_143293458_143294037 0.48 Zfp853
zinc finger protein 853
124
0.91
chr12_12938033_12939196 0.48 Mycn
v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived
2002
0.23
chr5_69340137_69340288 0.48 Gm24368
predicted gene, 24368
571
0.63
chr15_101253842_101254216 0.48 Nr4a1
nuclear receptor subfamily 4, group A, member 1
240
0.86
chr12_70830034_70830209 0.47 Frmd6
FERM domain containing 6
4432
0.2
chrX_20290867_20291587 0.47 Slc9a7
solute carrier family 9 (sodium/hydrogen exchanger), member 7
543
0.77
chr9_37783109_37783351 0.47 Olfr875
olfactory receptor 875
10593
0.1
chr15_84444030_84444699 0.47 Shisal1
shisa like 1
667
0.75
chr15_103005378_103006088 0.46 Hoxc6
homeobox C6
3840
0.1
chr4_134496639_134497966 0.46 Paqr7
progestin and adipoQ receptor family member VII
261
0.84
chr2_164961062_164961920 0.46 Slc12a5
solute carrier family 12, member 5
645
0.6
chr17_56466771_56466941 0.46 Ptprs
protein tyrosine phosphatase, receptor type, S
4640
0.17
chr1_69105258_69106691 0.46 Gm16076
predicted gene 16076
766
0.61
chr11_95057837_95057988 0.46 Itga3
integrin alpha 3
1717
0.25
chr9_102722581_102723136 0.45 Amotl2
angiomotin-like 2
324
0.83
chr4_127235958_127237081 0.45 Smim12
small integral membrane protein 12
7265
0.16
chr1_133049808_133049959 0.45 Pik3c2b
phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta
3871
0.17
chr19_46063703_46063854 0.45 Pprc1
peroxisome proliferative activated receptor, gamma, coactivator-related 1
4056
0.15
chr4_28816938_28817154 0.44 Epha7
Eph receptor A7
1617
0.37
chr3_45432245_45432549 0.44 Gm2136
predicted gene 2136
5983
0.17
chr3_10329449_10329600 0.44 Impa1
inositol (myo)-1(or 4)-monophosphatase 1
1608
0.22
chr6_114133449_114133914 0.44 Slc6a11
solute carrier family 6 (neurotransmitter transporter, GABA), member 11
2262
0.31
chr2_3419168_3419605 0.44 Meig1
meiosis expressed gene 1
257
0.87
chr9_55326922_55327600 0.43 Tmem266
transmembrane protein 266
312
0.58
chr17_26953045_26954307 0.43 Syngap1
synaptic Ras GTPase activating protein 1 homolog (rat)
790
0.36
chr14_14345697_14346878 0.43 Il3ra
interleukin 3 receptor, alpha chain
12
0.94
chr2_102552573_102552724 0.42 Pamr1
peptidase domain containing associated with muscle regeneration 1
2499
0.38
chr2_72516060_72516494 0.41 Rps13-ps8
ribosmal protein S13, pseudogene 8
28935
0.16
chr13_97248203_97248451 0.41 Enc1
ectodermal-neural cortex 1
7222
0.17
chr13_109926306_109927455 0.41 Pde4d
phosphodiesterase 4D, cAMP specific
36
0.98
chr2_164388819_164390055 0.41 Slpi
secretory leukocyte peptidase inhibitor
342
0.77
chrX_36111786_36112920 0.40 Il13ra1
interleukin 13 receptor, alpha 1
243
0.94
chr5_147747988_147748815 0.40 Gm43156
predicted gene 43156
2885
0.27
chr11_119156502_119158281 0.40 Mir6934
microRNA 6934
3254
0.17
chr7_29224845_29225704 0.39 Kcnk6
potassium inwardly-rectifying channel, subfamily K, member 6
6033
0.09
chr15_79802268_79802553 0.39 Nptxr
neuronal pentraxin receptor
2299
0.17
chr19_46320592_46320743 0.39 Psd
pleckstrin and Sec7 domain containing
2576
0.12
chr3_11213105_11213577 0.39 Gm22547
predicted gene, 22547
59004
0.16
chr16_42782105_42782459 0.39 4932412D23Rik
RIKEN cDNA 4932412D23 gene
93305
0.08
chr7_74006482_74006835 0.39 St8sia2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
7016
0.2
chr10_105689563_105689778 0.39 n-R5s80
nuclear encoded rRNA 5S 80
114527
0.05
chr4_124576262_124576413 0.38 4933407E24Rik
RIKEN cDNA 4933407E24 gene
7147
0.19
chr8_26268626_26269363 0.38 Gm31727
predicted gene, 31727
2017
0.23

Histogram of CRE-TSS distances for CREs targeted by :

Histogram of

Rank distribution of CRE target scores:

Histogram of target CRE score.

Distribution of target CREs across different genomic regions:

Weighted Piechart of Weighted Piechart of Weighted Piechart of

Network of associatons between targets according to the STRING database.

StringDB image

First level regulatory network of Nfkb2

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0070948 regulation of neutrophil mediated cytotoxicity(GO:0070948) regulation of neutrophil mediated killing of symbiont cell(GO:0070949)
0.3 1.3 GO:0031117 positive regulation of microtubule depolymerization(GO:0031117)
0.3 1.0 GO:1901078 negative regulation of relaxation of muscle(GO:1901078)
0.3 1.0 GO:0030070 insulin processing(GO:0030070)
0.3 0.9 GO:0010963 regulation of L-arginine import(GO:0010963)
0.3 0.8 GO:0052203 modulation of catalytic activity in other organism involved in symbiotic interaction(GO:0052203) modulation by host of symbiont catalytic activity(GO:0052422)
0.2 0.7 GO:0072092 ureteric bud invasion(GO:0072092)
0.2 0.8 GO:0030035 microspike assembly(GO:0030035)
0.2 0.5 GO:0060523 prostate epithelial cord elongation(GO:0060523)
0.2 1.2 GO:0042118 endothelial cell activation(GO:0042118)
0.2 0.5 GO:1904742 regulation of telomeric DNA binding(GO:1904742)
0.2 0.3 GO:0071332 cellular response to fructose stimulus(GO:0071332)
0.1 0.4 GO:0015888 thiamine transport(GO:0015888)
0.1 0.7 GO:0060023 soft palate development(GO:0060023)
0.1 1.2 GO:0035428 hexose transmembrane transport(GO:0035428)
0.1 0.4 GO:2000587 regulation of platelet-derived growth factor receptor-beta signaling pathway(GO:2000586) negative regulation of platelet-derived growth factor receptor-beta signaling pathway(GO:2000587)
0.1 0.4 GO:0035962 response to interleukin-13(GO:0035962) cellular response to interleukin-13(GO:0035963)
0.1 0.5 GO:0070100 negative regulation of chemokine-mediated signaling pathway(GO:0070100)
0.1 0.2 GO:0072197 ureter morphogenesis(GO:0072197)
0.1 0.4 GO:0021938 smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation(GO:0021938)
0.1 0.3 GO:1905098 negative regulation of guanyl-nucleotide exchange factor activity(GO:1905098)
0.1 0.6 GO:1903054 negative regulation of extracellular matrix organization(GO:1903054)
0.1 1.0 GO:0051823 regulation of synapse structural plasticity(GO:0051823)
0.1 0.3 GO:0060060 post-embryonic retina morphogenesis in camera-type eye(GO:0060060)
0.1 0.6 GO:0032962 positive regulation of inositol trisphosphate biosynthetic process(GO:0032962)
0.1 0.3 GO:0035461 vitamin transmembrane transport(GO:0035461)
0.1 0.4 GO:1903423 positive regulation of synaptic vesicle recycling(GO:1903423)
0.1 0.3 GO:0032289 central nervous system myelin formation(GO:0032289)
0.1 0.8 GO:0090244 Wnt signaling pathway involved in somitogenesis(GO:0090244)
0.1 0.3 GO:0033387 putrescine biosynthetic process from ornithine(GO:0033387)
0.1 0.2 GO:2000297 negative regulation of synapse maturation(GO:2000297)
0.1 0.4 GO:0007196 adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway(GO:0007196)
0.1 0.4 GO:0043435 response to corticotropin-releasing hormone(GO:0043435) cellular response to corticotropin-releasing hormone stimulus(GO:0071376)
0.1 0.3 GO:0051665 membrane raft localization(GO:0051665)
0.1 1.3 GO:0021978 telencephalon regionalization(GO:0021978)
0.1 0.3 GO:0044034 negative stranded viral RNA replication(GO:0039689) multi-organism biosynthetic process(GO:0044034)
0.1 0.3 GO:1903802 L-glutamate(1-) import into cell(GO:1903802) L-glutamate import into cell(GO:1990123)
0.1 0.9 GO:0090129 positive regulation of synapse maturation(GO:0090129)
0.1 0.2 GO:2000834 androgen secretion(GO:0035935) regulation of androgen secretion(GO:2000834) positive regulation of androgen secretion(GO:2000836)
0.1 0.2 GO:0002930 trabecular meshwork development(GO:0002930)
0.1 0.2 GO:0009449 gamma-aminobutyric acid biosynthetic process(GO:0009449)
0.1 0.2 GO:0045163 clustering of voltage-gated potassium channels(GO:0045163)
0.1 0.3 GO:0046959 habituation(GO:0046959)
0.1 0.1 GO:0033563 dorsal/ventral axon guidance(GO:0033563)
0.1 0.6 GO:0048012 hepatocyte growth factor receptor signaling pathway(GO:0048012)
0.1 0.3 GO:0098795 mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795)
0.1 0.2 GO:0031915 positive regulation of synaptic plasticity(GO:0031915)
0.1 0.9 GO:0050966 detection of mechanical stimulus involved in sensory perception of pain(GO:0050966)
0.1 0.2 GO:0021780 oligodendrocyte cell fate specification(GO:0021778) oligodendrocyte cell fate commitment(GO:0021779) glial cell fate specification(GO:0021780)
0.1 0.3 GO:0048743 positive regulation of skeletal muscle fiber development(GO:0048743)
0.1 4.1 GO:0010923 negative regulation of phosphatase activity(GO:0010923)
0.1 1.5 GO:0090004 positive regulation of establishment of protein localization to plasma membrane(GO:0090004)
0.1 0.2 GO:0035553 oxidative RNA demethylation(GO:0035513) oxidative single-stranded RNA demethylation(GO:0035553)
0.1 0.3 GO:0045634 regulation of melanocyte differentiation(GO:0045634)
0.1 0.2 GO:0048549 positive regulation of pinocytosis(GO:0048549)
0.1 0.1 GO:0097104 postsynaptic membrane assembly(GO:0097104)
0.1 0.1 GO:0061642 chemoattraction of axon(GO:0061642)
0.0 0.1 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.0 1.1 GO:0006491 N-glycan processing(GO:0006491)
0.0 1.0 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.7 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 0.2 GO:0060732 positive regulation of inositol phosphate biosynthetic process(GO:0060732)
0.0 0.1 GO:0042663 regulation of endodermal cell fate specification(GO:0042663)
0.0 0.1 GO:0002874 regulation of chronic inflammatory response to antigenic stimulus(GO:0002874)
0.0 0.1 GO:0090135 actin filament branching(GO:0090135)
0.0 0.2 GO:0051964 negative regulation of synapse assembly(GO:0051964)
0.0 0.0 GO:1903416 response to glycoside(GO:1903416)
0.0 0.4 GO:0098719 sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.0 0.6 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.0 0.9 GO:1902668 negative regulation of axon extension involved in axon guidance(GO:0048843) negative regulation of axon guidance(GO:1902668)
0.0 0.2 GO:0033564 anterior/posterior axon guidance(GO:0033564)
0.0 0.2 GO:2000618 regulation of histone H4-K16 acetylation(GO:2000618)
0.0 0.2 GO:0097011 cellular response to granulocyte macrophage colony-stimulating factor stimulus(GO:0097011)
0.0 0.1 GO:0034093 positive regulation of maintenance of sister chromatid cohesion(GO:0034093) positive regulation of maintenance of mitotic sister chromatid cohesion(GO:0034184)
0.0 0.1 GO:0015766 disaccharide transport(GO:0015766) sucrose transport(GO:0015770) oligosaccharide transport(GO:0015772)
0.0 0.3 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.0 0.2 GO:0090385 phagosome-lysosome fusion(GO:0090385)
0.0 0.1 GO:0061502 early endosome to recycling endosome transport(GO:0061502)
0.0 1.3 GO:0030514 negative regulation of BMP signaling pathway(GO:0030514)
0.0 0.1 GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process(GO:0036092)
0.0 0.1 GO:2000821 regulation of grooming behavior(GO:2000821)
0.0 0.1 GO:0021586 pons maturation(GO:0021586)
0.0 0.1 GO:0003383 apical constriction(GO:0003383)
0.0 0.3 GO:0035563 positive regulation of chromatin binding(GO:0035563)
0.0 0.1 GO:0030908 intein-mediated protein splicing(GO:0016539) protein splicing(GO:0030908)
0.0 0.1 GO:0035262 gonad morphogenesis(GO:0035262)
0.0 0.1 GO:0060687 regulation of branching involved in prostate gland morphogenesis(GO:0060687)
0.0 0.3 GO:0048733 sebaceous gland development(GO:0048733)
0.0 0.8 GO:0010107 potassium ion import(GO:0010107)
0.0 0.2 GO:0007221 positive regulation of transcription of Notch receptor target(GO:0007221)
0.0 0.3 GO:0008300 isoprenoid catabolic process(GO:0008300)
0.0 0.1 GO:0045091 regulation of single stranded viral RNA replication via double stranded DNA intermediate(GO:0045091)
0.0 0.2 GO:0007253 cytoplasmic sequestering of NF-kappaB(GO:0007253)
0.0 0.2 GO:0016081 synaptic vesicle docking(GO:0016081)
0.0 0.3 GO:0060272 embryonic skeletal joint morphogenesis(GO:0060272)
0.0 0.2 GO:0016264 gap junction assembly(GO:0016264)
0.0 0.1 GO:0035507 regulation of myosin-light-chain-phosphatase activity(GO:0035507)
0.0 0.1 GO:0090336 positive regulation of brown fat cell differentiation(GO:0090336)
0.0 0.2 GO:0031937 positive regulation of chromatin silencing(GO:0031937)
0.0 0.2 GO:0034498 early endosome to Golgi transport(GO:0034498)
0.0 0.1 GO:0003199 endocardial cushion to mesenchymal transition involved in heart valve formation(GO:0003199)
0.0 0.1 GO:1900122 positive regulation of receptor binding(GO:1900122)
0.0 0.2 GO:0051967 negative regulation of synaptic transmission, glutamatergic(GO:0051967)
0.0 0.3 GO:0048488 synaptic vesicle endocytosis(GO:0048488)
0.0 0.1 GO:0031446 regulation of fast-twitch skeletal muscle fiber contraction(GO:0031446) positive regulation of fast-twitch skeletal muscle fiber contraction(GO:0031448)
0.0 0.1 GO:0051795 positive regulation of catagen(GO:0051795)
0.0 0.1 GO:0051902 negative regulation of mitochondrial depolarization(GO:0051902)
0.0 0.1 GO:0097151 positive regulation of inhibitory postsynaptic potential(GO:0097151)
0.0 0.0 GO:0061002 negative regulation of dendritic spine morphogenesis(GO:0061002)
0.0 0.1 GO:0060373 regulation of ventricular cardiac muscle cell membrane depolarization(GO:0060373)
0.0 0.1 GO:0016198 axon choice point recognition(GO:0016198)
0.0 0.2 GO:0030644 cellular chloride ion homeostasis(GO:0030644)
0.0 0.1 GO:0021615 glossopharyngeal nerve morphogenesis(GO:0021615)
0.0 0.1 GO:0009957 epidermal cell fate specification(GO:0009957)
0.0 0.0 GO:0097107 postsynaptic density organization(GO:0097106) postsynaptic density assembly(GO:0097107)
0.0 0.6 GO:0048791 calcium ion-regulated exocytosis of neurotransmitter(GO:0048791)
0.0 0.0 GO:0060126 somatotropin secreting cell differentiation(GO:0060126)
0.0 0.2 GO:1902231 positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage(GO:1902231)
0.0 0.7 GO:0048013 ephrin receptor signaling pathway(GO:0048013)
0.0 0.4 GO:0010842 retina layer formation(GO:0010842)
0.0 0.3 GO:0043518 negative regulation of DNA damage response, signal transduction by p53 class mediator(GO:0043518)
0.0 0.2 GO:0006702 androgen biosynthetic process(GO:0006702)
0.0 0.6 GO:0043252 sodium-independent organic anion transport(GO:0043252)
0.0 0.1 GO:0061302 smooth muscle cell-matrix adhesion(GO:0061302)
0.0 0.1 GO:0072079 nephron tubule formation(GO:0072079)
0.0 0.1 GO:2000807 regulation of synaptic vesicle clustering(GO:2000807)
0.0 0.1 GO:0038031 non-canonical Wnt signaling pathway via MAPK cascade(GO:0038030) non-canonical Wnt signaling pathway via JNK cascade(GO:0038031)
0.0 0.1 GO:0072161 mesenchymal cell differentiation involved in kidney development(GO:0072161) mesenchymal cell differentiation involved in renal system development(GO:2001012)
0.0 0.1 GO:0043587 tongue morphogenesis(GO:0043587)
0.0 0.1 GO:0021562 vestibulocochlear nerve development(GO:0021562)
0.0 0.0 GO:0036490 regulation of translation in response to endoplasmic reticulum stress(GO:0036490) regulation of translation initiation in response to endoplasmic reticulum stress(GO:0036491) eiF2alpha phosphorylation in response to endoplasmic reticulum stress(GO:0036492) negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation(GO:1903912)
0.0 0.1 GO:0021570 rhombomere 4 development(GO:0021570)
0.0 0.1 GO:0046985 positive regulation of hemoglobin biosynthetic process(GO:0046985)
0.0 0.5 GO:0090023 positive regulation of neutrophil chemotaxis(GO:0090023)
0.0 0.2 GO:1904153 negative regulation of protein exit from endoplasmic reticulum(GO:0070862) negative regulation of retrograde protein transport, ER to cytosol(GO:1904153)
0.0 0.1 GO:0048664 neuron fate determination(GO:0048664)
0.0 0.1 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.1 GO:0019287 isopentenyl diphosphate biosynthetic process(GO:0009240) isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0 0.1 GO:0046340 diacylglycerol catabolic process(GO:0046340)
0.0 0.1 GO:1901534 positive regulation of hematopoietic progenitor cell differentiation(GO:1901534)
0.0 0.2 GO:0021520 spinal cord motor neuron cell fate specification(GO:0021520)
0.0 0.1 GO:1902065 response to L-glutamate(GO:1902065)
0.0 0.1 GO:0036072 intramembranous ossification(GO:0001957) direct ossification(GO:0036072)
0.0 0.1 GO:1900452 regulation of long term synaptic depression(GO:1900452)
0.0 0.1 GO:0021902 commitment of neuronal cell to specific neuron type in forebrain(GO:0021902)
0.0 0.0 GO:2000977 regulation of forebrain neuron differentiation(GO:2000977)
0.0 0.0 GO:0035771 interleukin-4-mediated signaling pathway(GO:0035771)
0.0 0.0 GO:0010912 regulation of isomerase activity(GO:0010911) positive regulation of isomerase activity(GO:0010912)
0.0 0.0 GO:0061092 regulation of phospholipid translocation(GO:0061091) positive regulation of phospholipid translocation(GO:0061092)
0.0 0.0 GO:0051182 coenzyme transport(GO:0051182)
0.0 0.1 GO:0045607 regulation of auditory receptor cell differentiation(GO:0045607) regulation of mechanoreceptor differentiation(GO:0045631) regulation of inner ear receptor cell differentiation(GO:2000980)
0.0 0.1 GO:0031584 activation of phospholipase D activity(GO:0031584)
0.0 0.2 GO:0051601 exocyst localization(GO:0051601)
0.0 0.1 GO:0043320 natural killer cell degranulation(GO:0043320)
0.0 0.1 GO:0090557 establishment of endothelial intestinal barrier(GO:0090557)
0.0 0.1 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.1 GO:0015889 cobalamin transport(GO:0015889)
0.0 0.2 GO:0071526 semaphorin-plexin signaling pathway(GO:0071526)
0.0 0.1 GO:2000288 positive regulation of myoblast proliferation(GO:2000288)
0.0 0.1 GO:0071569 protein ufmylation(GO:0071569)
0.0 0.2 GO:2000479 regulation of cAMP-dependent protein kinase activity(GO:2000479)
0.0 0.0 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.0 0.7 GO:1901379 regulation of potassium ion transmembrane transport(GO:1901379)
0.0 0.0 GO:0090306 spindle assembly involved in meiosis(GO:0090306)
0.0 0.0 GO:0003096 renal sodium ion transport(GO:0003096) glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.0 0.3 GO:0048266 behavioral response to pain(GO:0048266)
0.0 0.2 GO:0045652 regulation of megakaryocyte differentiation(GO:0045652)
0.0 0.0 GO:0060385 axonogenesis involved in innervation(GO:0060385)
0.0 0.1 GO:0042940 D-amino acid transport(GO:0042940)
0.0 0.1 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.0 0.1 GO:0051013 microtubule severing(GO:0051013)
0.0 0.1 GO:0070831 basement membrane assembly(GO:0070831)
0.0 1.1 GO:1903955 positive regulation of protein targeting to mitochondrion(GO:1903955)
0.0 0.1 GO:1903546 protein localization to photoreceptor outer segment(GO:1903546)
0.0 0.0 GO:2001185 regulation of CD8-positive, alpha-beta T cell activation(GO:2001185)
0.0 0.1 GO:0031643 positive regulation of myelination(GO:0031643)
0.0 0.1 GO:0099515 actin filament-based transport(GO:0099515)
0.0 0.0 GO:0021913 regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification(GO:0021913)
0.0 0.1 GO:0030953 astral microtubule organization(GO:0030953)
0.0 0.4 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 0.1 GO:1901621 negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning(GO:1901621)
0.0 0.0 GO:0045917 positive regulation of complement activation(GO:0045917) positive regulation of protein activation cascade(GO:2000259)
0.0 0.0 GO:0014873 response to muscle activity involved in regulation of muscle adaptation(GO:0014873)
0.0 0.0 GO:1902513 regulation of organelle transport along microtubule(GO:1902513)
0.0 0.1 GO:2000010 positive regulation of protein localization to cell surface(GO:2000010)
0.0 1.1 GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156)
0.0 0.1 GO:0072488 ammonium transmembrane transport(GO:0072488)
0.0 0.2 GO:0071475 cellular hyperosmotic salinity response(GO:0071475)
0.0 0.0 GO:1903984 positive regulation of TRAIL-activated apoptotic signaling pathway(GO:1903984)
0.0 0.8 GO:0060021 palate development(GO:0060021)
0.0 0.1 GO:0031507 heterochromatin assembly(GO:0031507)
0.0 0.1 GO:0007296 vitellogenesis(GO:0007296)
0.0 0.0 GO:0033239 negative regulation of cellular amine metabolic process(GO:0033239)
0.0 0.1 GO:0060484 lung-associated mesenchyme development(GO:0060484)
0.0 0.3 GO:0009409 response to cold(GO:0009409)
0.0 0.0 GO:0042420 dopamine catabolic process(GO:0042420)
0.0 0.3 GO:0007212 dopamine receptor signaling pathway(GO:0007212)
0.0 0.0 GO:0090394 negative regulation of excitatory postsynaptic potential(GO:0090394)
0.0 0.1 GO:0015813 L-glutamate transport(GO:0015813)
0.0 0.0 GO:0060836 lymphatic endothelial cell differentiation(GO:0060836)
0.0 0.1 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.0 0.3 GO:0035329 hippo signaling(GO:0035329)
0.0 0.0 GO:0072383 plus-end-directed vesicle transport along microtubule(GO:0072383) plus-end-directed organelle transport along microtubule(GO:0072386)
0.0 0.1 GO:2000254 regulation of male germ cell proliferation(GO:2000254)
0.0 0.1 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.0 0.1 GO:1901223 negative regulation of NIK/NF-kappaB signaling(GO:1901223)
0.0 0.1 GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.0 0.3 GO:0019731 antibacterial humoral response(GO:0019731)
0.0 0.0 GO:0071504 response to heparin(GO:0071503) cellular response to heparin(GO:0071504)
0.0 0.0 GO:0035948 positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter(GO:0035948)
0.0 0.0 GO:0060527 prostate glandular acinus morphogenesis(GO:0060526) prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis(GO:0060527)
0.0 0.2 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.0 0.1 GO:0071397 cellular response to cholesterol(GO:0071397)
0.0 0.1 GO:0071257 cellular response to electrical stimulus(GO:0071257)
0.0 0.0 GO:0034163 regulation of toll-like receptor 9 signaling pathway(GO:0034163) positive regulation of toll-like receptor 9 signaling pathway(GO:0034165)
0.0 0.0 GO:0009642 response to light intensity(GO:0009642)
0.0 0.0 GO:0010792 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792)
0.0 0.0 GO:0009189 deoxyribonucleoside diphosphate biosynthetic process(GO:0009189)
0.0 0.1 GO:0070813 hydrogen sulfide metabolic process(GO:0070813)
0.0 0.0 GO:0045585 regulation of cytotoxic T cell differentiation(GO:0045583) positive regulation of cytotoxic T cell differentiation(GO:0045585)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:0044393 microspike(GO:0044393)
0.2 0.5 GO:0008282 ATP-sensitive potassium channel complex(GO:0008282)
0.2 0.5 GO:0005594 collagen type IX trimer(GO:0005594)
0.2 1.2 GO:0043203 axon hillock(GO:0043203)
0.1 0.4 GO:0097451 glial limiting end-foot(GO:0097451)
0.1 0.3 GO:0035355 Toll-like receptor 2-Toll-like receptor 6 protein complex(GO:0035355)
0.1 0.6 GO:0008290 F-actin capping protein complex(GO:0008290)
0.1 0.1 GO:0070033 synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex(GO:0070033)
0.1 1.0 GO:0017146 NMDA selective glutamate receptor complex(GO:0017146)
0.1 0.4 GO:0048787 presynaptic active zone membrane(GO:0048787)
0.1 0.3 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.1 0.2 GO:1990597 AIP1-IRE1 complex(GO:1990597)
0.1 0.5 GO:0070187 telosome(GO:0070187)
0.1 0.1 GO:0016533 cyclin-dependent protein kinase 5 holoenzyme complex(GO:0016533)
0.1 1.1 GO:0005614 interstitial matrix(GO:0005614)
0.1 0.8 GO:0030877 beta-catenin destruction complex(GO:0030877)
0.1 0.1 GO:0035867 alphav-beta3 integrin-IGF-1-IGF1R complex(GO:0035867)
0.1 0.6 GO:0005583 fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)
0.0 3.5 GO:0008076 voltage-gated potassium channel complex(GO:0008076)
0.0 0.0 GO:0035061 interchromatin granule(GO:0035061)
0.0 0.3 GO:0043196 varicosity(GO:0043196)
0.0 0.4 GO:0097542 ciliary tip(GO:0097542)
0.0 0.6 GO:0000930 gamma-tubulin complex(GO:0000930)
0.0 0.6 GO:0060077 inhibitory synapse(GO:0060077)
0.0 0.2 GO:0019907 cyclin-dependent protein kinase activating kinase holoenzyme complex(GO:0019907)
0.0 0.2 GO:0097449 astrocyte projection(GO:0097449)
0.0 0.3 GO:0044327 dendritic spine head(GO:0044327)
0.0 0.1 GO:0030478 actin cap(GO:0030478)
0.0 0.1 GO:1990907 beta-catenin-TCF complex(GO:1990907)
0.0 1.1 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 0.2 GO:0032045 guanyl-nucleotide exchange factor complex(GO:0032045)
0.0 0.2 GO:0034464 BBSome(GO:0034464)
0.0 0.2 GO:0070852 cell body fiber(GO:0070852)
0.0 0.4 GO:0031528 microvillus membrane(GO:0031528)
0.0 2.7 GO:0043204 perikaryon(GO:0043204)
0.0 1.2 GO:0042734 presynaptic membrane(GO:0042734)
0.0 3.2 GO:0030426 growth cone(GO:0030426)
0.0 0.3 GO:0005640 nuclear outer membrane(GO:0005640)
0.0 0.1 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.1 GO:0043293 apoptosome(GO:0043293)
0.0 0.1 GO:0042719 mitochondrial intermembrane space protein transporter complex(GO:0042719)
0.0 0.3 GO:0000421 autophagosome membrane(GO:0000421)
0.0 0.2 GO:0043657 host(GO:0018995) host cell part(GO:0033643) host cell(GO:0043657)
0.0 0.1 GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane(GO:0033116)
0.0 0.1 GO:0031501 mannosyltransferase complex(GO:0031501)
0.0 0.8 GO:0005871 kinesin complex(GO:0005871)
0.0 0.0 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.0 0.2 GO:0000145 exocyst(GO:0000145)
0.0 0.1 GO:0070688 MLL5-L complex(GO:0070688)
0.0 1.4 GO:0055037 recycling endosome(GO:0055037)
0.0 0.1 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 0.0 GO:0070552 BRISC complex(GO:0070552)
0.0 0.0 GO:0097513 myosin II filament(GO:0097513)
0.0 0.1 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.0 0.0 GO:0005883 neurofilament(GO:0005883)
0.0 0.1 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.0 0.2 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.0 0.2 GO:0045334 clathrin-coated endocytic vesicle(GO:0045334)
0.0 0.1 GO:0031209 SCAR complex(GO:0031209)
0.0 0.3 GO:0005891 voltage-gated calcium channel complex(GO:0005891)
0.0 0.2 GO:0030904 retromer complex(GO:0030904)
0.0 0.1 GO:0031527 filopodium membrane(GO:0031527)
0.0 0.0 GO:0005767 secondary lysosome(GO:0005767)
0.0 0.0 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.0 0.1 GO:0035102 PRC1 complex(GO:0035102)
0.0 0.2 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.1 GO:0031932 TORC2 complex(GO:0031932)
0.0 0.2 GO:0005922 connexon complex(GO:0005922)
0.0 0.1 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.0 GO:0071953 elastic fiber(GO:0071953)
0.0 0.1 GO:0030132 clathrin coat of coated pit(GO:0030132)
0.0 0.1 GO:0097197 tetraspanin-enriched microdomain(GO:0097197)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.8 GO:0019992 diacylglycerol binding(GO:0019992)
0.2 1.0 GO:0003828 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity(GO:0003828)
0.2 0.8 GO:0015272 ATP-activated inward rectifier potassium channel activity(GO:0015272)
0.1 1.9 GO:0045236 CXCR chemokine receptor binding(GO:0045236)
0.1 1.3 GO:0001091 RNA polymerase II basal transcription factor binding(GO:0001091)
0.1 1.4 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.1 1.4 GO:0051378 serotonin binding(GO:0051378)
0.1 0.4 GO:0070905 serine binding(GO:0070905)
0.1 0.4 GO:0034186 apolipoprotein A-I binding(GO:0034186)
0.1 0.9 GO:0004972 NMDA glutamate receptor activity(GO:0004972)
0.1 0.8 GO:0046790 virion binding(GO:0046790)
0.1 0.3 GO:0031826 type 2A serotonin receptor binding(GO:0031826)
0.1 1.1 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.1 0.3 GO:0043237 laminin-1 binding(GO:0043237)
0.1 0.5 GO:0048495 Roundabout binding(GO:0048495)
0.1 0.9 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 1.1 GO:0005351 sugar:proton symporter activity(GO:0005351)
0.1 0.2 GO:0004999 vasoactive intestinal polypeptide receptor activity(GO:0004999)
0.1 0.4 GO:0008454 alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0008454)
0.1 0.6 GO:0008599 protein phosphatase type 1 regulator activity(GO:0008599)
0.1 0.5 GO:0098632 protein binding involved in cell-cell adhesion(GO:0098632)
0.1 0.2 GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity(GO:0003865) cholestenone 5-alpha-reductase activity(GO:0047751)
0.1 0.9 GO:0070016 armadillo repeat domain binding(GO:0070016)
0.1 0.3 GO:0005095 GTPase inhibitor activity(GO:0005095)
0.1 0.3 GO:0071723 lipopeptide binding(GO:0071723)
0.1 0.9 GO:0022841 potassium ion leak channel activity(GO:0022841)
0.1 0.3 GO:0015379 potassium:chloride symporter activity(GO:0015379) potassium ion symporter activity(GO:0022820)
0.1 0.3 GO:0042979 ornithine decarboxylase regulator activity(GO:0042979)
0.1 0.7 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.1 0.6 GO:0036312 phosphatidylinositol 3-kinase regulatory subunit binding(GO:0036312)
0.1 0.2 GO:0031749 D2 dopamine receptor binding(GO:0031749)
0.1 1.5 GO:0050699 WW domain binding(GO:0050699)
0.1 1.2 GO:0005540 hyaluronic acid binding(GO:0005540)
0.1 0.2 GO:0035515 oxidative RNA demethylase activity(GO:0035515)
0.1 0.4 GO:0004385 guanylate kinase activity(GO:0004385)
0.1 0.2 GO:0031493 nucleosomal histone binding(GO:0031493)
0.0 1.4 GO:0005164 tumor necrosis factor receptor binding(GO:0005164)
0.0 0.6 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 1.6 GO:0015459 potassium channel regulator activity(GO:0015459)
0.0 1.3 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 0.9 GO:0030215 semaphorin receptor binding(GO:0030215)
0.0 0.5 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.1 GO:0048101 calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity(GO:0048101)
0.0 0.4 GO:0015385 sodium:proton antiporter activity(GO:0015385) potassium:proton antiporter activity(GO:0015386)
0.0 0.1 GO:0035727 lysophosphatidic acid binding(GO:0035727)
0.0 0.2 GO:0047760 butyrate-CoA ligase activity(GO:0047760)
0.0 0.1 GO:0005332 gamma-aminobutyric acid:sodium symporter activity(GO:0005332)
0.0 0.8 GO:0005246 calcium channel regulator activity(GO:0005246)
0.0 0.1 GO:0008158 hedgehog receptor activity(GO:0008158)
0.0 0.2 GO:0015277 kainate selective glutamate receptor activity(GO:0015277)
0.0 0.3 GO:0004767 sphingomyelin phosphodiesterase activity(GO:0004767)
0.0 0.1 GO:0030911 TPR domain binding(GO:0030911)
0.0 0.2 GO:0008046 axon guidance receptor activity(GO:0008046)
0.0 0.2 GO:0103116 alpha-D-galactofuranose transporter activity(GO:0103116)
0.0 0.1 GO:0005168 neurotrophin TRKA receptor binding(GO:0005168)
0.0 0.1 GO:0038064 collagen receptor activity(GO:0038064)
0.0 0.1 GO:0086006 voltage-gated sodium channel activity involved in cardiac muscle cell action potential(GO:0086006)
0.0 1.6 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.6 GO:0015347 sodium-independent organic anion transmembrane transporter activity(GO:0015347)
0.0 0.2 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438)
0.0 0.1 GO:0008934 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate 3-phosphatase activity(GO:0052832) inositol monophosphate 4-phosphatase activity(GO:0052833) inositol monophosphate phosphatase activity(GO:0052834)
0.0 0.1 GO:0050692 DBD domain binding(GO:0050692)
0.0 0.4 GO:0001786 phosphatidylserine binding(GO:0001786)
0.0 0.1 GO:0004886 9-cis retinoic acid receptor activity(GO:0004886)
0.0 0.6 GO:0043015 gamma-tubulin binding(GO:0043015)
0.0 0.1 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.1 GO:0001727 lipid kinase activity(GO:0001727)
0.0 0.3 GO:0035259 glucocorticoid receptor binding(GO:0035259)
0.0 0.5 GO:0046875 ephrin receptor binding(GO:0046875)
0.0 0.1 GO:0004128 cytochrome-b5 reductase activity, acting on NAD(P)H(GO:0004128)
0.0 0.3 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237)
0.0 0.1 GO:0004127 cytidylate kinase activity(GO:0004127)
0.0 0.1 GO:0004970 ionotropic glutamate receptor activity(GO:0004970)
0.0 0.1 GO:0001601 peptide YY receptor activity(GO:0001601)
0.0 0.1 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.1 GO:0035014 phosphatidylinositol 3-kinase regulator activity(GO:0035014)
0.0 0.1 GO:0005078 MAP-kinase scaffold activity(GO:0005078)
0.0 0.1 GO:0030957 Tat protein binding(GO:0030957)
0.0 0.1 GO:0043199 sulfate binding(GO:0043199)
0.0 0.2 GO:0015643 toxic substance binding(GO:0015643)
0.0 0.0 GO:0031698 beta-2 adrenergic receptor binding(GO:0031698)
0.0 0.2 GO:0031005 filamin binding(GO:0031005)
0.0 0.7 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 0.1 GO:0042043 neurexin family protein binding(GO:0042043)
0.0 0.0 GO:0016520 growth hormone-releasing hormone receptor activity(GO:0016520)
0.0 0.1 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.1 GO:0003796 lysozyme activity(GO:0003796)
0.0 0.2 GO:0005313 L-glutamate transmembrane transporter activity(GO:0005313)
0.0 0.1 GO:0070815 peptidyl-lysine 5-dioxygenase activity(GO:0070815)
0.0 0.0 GO:0008732 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.0 0.1 GO:0070679 inositol 1,4,5 trisphosphate binding(GO:0070679)
0.0 0.2 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.0 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.1 GO:0038132 neuregulin binding(GO:0038132)
0.0 0.2 GO:0005243 gap junction channel activity(GO:0005243)
0.0 0.0 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.1 GO:0030306 ADP-ribosylation factor binding(GO:0030306)
0.0 0.1 GO:0033192 calmodulin-dependent protein phosphatase activity(GO:0033192)
0.0 0.2 GO:0017160 Ral GTPase binding(GO:0017160)
0.0 0.3 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.0 GO:0072542 protein phosphatase activator activity(GO:0072542)
0.0 0.0 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.0 0.0 GO:0031871 proteinase activated receptor binding(GO:0031871)
0.0 0.1 GO:0031628 opioid receptor binding(GO:0031628)
0.0 0.1 GO:0031994 insulin-like growth factor I binding(GO:0031994)
0.0 0.0 GO:0000702 oxidized base lesion DNA N-glycosylase activity(GO:0000702)
0.0 0.6 GO:0008138 protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.0 0.2 GO:0004551 nucleotide diphosphatase activity(GO:0004551)
0.0 0.5 GO:0050840 extracellular matrix binding(GO:0050840)
0.0 0.0 GO:0047276 N-acetyllactosaminide 3-alpha-galactosyltransferase activity(GO:0047276)
0.0 0.1 GO:0031730 CCR5 chemokine receptor binding(GO:0031730)
0.0 0.1 GO:0015197 peptide transporter activity(GO:0015197)
0.0 0.1 GO:0005021 vascular endothelial growth factor-activated receptor activity(GO:0005021)
0.0 0.2 GO:0042975 peroxisome proliferator activated receptor binding(GO:0042975)
0.0 0.1 GO:0004994 somatostatin receptor activity(GO:0004994)
0.0 0.1 GO:0019789 SUMO transferase activity(GO:0019789)
0.0 0.1 GO:0032027 myosin light chain binding(GO:0032027)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.4 PID MET PATHWAY Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met)
0.1 0.4 PID IL3 PATHWAY IL3-mediated signaling events
0.1 0.4 ST G ALPHA I PATHWAY G alpha i Pathway
0.1 1.1 PID SYNDECAN 3 PATHWAY Syndecan-3-mediated signaling events
0.1 0.1 ST DIFFERENTIATION PATHWAY IN PC12 CELLS Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway.
0.1 0.4 ST IL 13 PATHWAY Interleukin 13 (IL-13) Pathway
0.0 1.2 ST MYOCYTE AD PATHWAY Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway.
0.0 3.0 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.0 0.8 PID HEDGEHOG 2PATHWAY Signaling events mediated by the Hedgehog family
0.0 0.9 PID AVB3 OPN PATHWAY Osteopontin-mediated events
0.0 0.6 ST GRANULE CELL SURVIVAL PATHWAY Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway.
0.0 0.8 PID EPHA FWDPATHWAY EPHA forward signaling
0.0 0.2 PID ERBB2 ERBB3 PATHWAY ErbB2/ErbB3 signaling events
0.0 0.8 NABA PROTEOGLYCANS Genes encoding proteoglycans
0.0 0.7 PID RAC1 REG PATHWAY Regulation of RAC1 activity
0.0 0.4 PID CONE PATHWAY Visual signal transduction: Cones
0.0 0.2 PID TGFBR PATHWAY TGF-beta receptor signaling
0.0 0.2 PID ERBB NETWORK PATHWAY ErbB receptor signaling network
0.0 0.4 PID UPA UPAR PATHWAY Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling
0.0 0.2 PID NETRIN PATHWAY Netrin-mediated signaling events
0.0 0.5 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.0 0.6 PID SYNDECAN 1 PATHWAY Syndecan-1-mediated signaling events
0.0 0.3 PID TOLL ENDOGENOUS PATHWAY Endogenous TLR signaling
0.0 0.2 PID EPHRINB REV PATHWAY Ephrin B reverse signaling
0.0 1.9 NABA ECM AFFILIATED Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins
0.0 0.3 PID RXR VDR PATHWAY RXR and RAR heterodimerization with other nuclear receptor
0.0 0.0 PID IFNG PATHWAY IFN-gamma pathway
0.0 0.2 PID PS1 PATHWAY Presenilin action in Notch and Wnt signaling
0.0 0.3 PID RAS PATHWAY Regulation of Ras family activation
0.0 0.3 PID WNT SIGNALING PATHWAY Wnt signaling network
0.0 0.2 PID NCADHERIN PATHWAY N-cadherin signaling events
0.0 0.3 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.4 REACTOME SEROTONIN RECEPTORS Genes involved in Serotonin receptors
0.1 0.5 REACTOME PACKAGING OF TELOMERE ENDS Genes involved in Packaging Of Telomere Ends
0.1 1.0 REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS Genes involved in Facilitative Na+-independent glucose transporters
0.1 1.1 REACTOME CS DS DEGRADATION Genes involved in CS/DS degradation
0.1 0.9 REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS Genes involved in Tandem pore domain potassium channels
0.1 1.1 REACTOME N GLYCAN ANTENNAE ELONGATION Genes involved in N-Glycan antennae elongation
0.1 0.3 REACTOME BETA DEFENSINS Genes involved in Beta defensins
0.1 0.9 REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION Genes involved in Unblocking of NMDA receptor, glutamate binding and activation
0.1 1.3 REACTOME MYOGENESIS Genes involved in Myogenesis
0.1 0.8 REACTOME OTHER SEMAPHORIN INTERACTIONS Genes involved in Other semaphorin interactions
0.1 0.6 REACTOME DSCAM INTERACTIONS Genes involved in DSCAM interactions
0.1 1.0 REACTOME DARPP 32 EVENTS Genes involved in DARPP-32 events
0.0 1.9 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.5 REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS Genes involved in Ionotropic activity of Kainate Receptors
0.0 0.8 REACTOME INSULIN SYNTHESIS AND PROCESSING Genes involved in Insulin Synthesis and Processing
0.0 0.1 REACTOME SIGNALING BY ERBB2 Genes involved in Signaling by ERBB2
0.0 1.2 REACTOME INWARDLY RECTIFYING K CHANNELS Genes involved in Inwardly rectifying K+ channels
0.0 0.4 REACTOME NFKB IS ACTIVATED AND SIGNALS SURVIVAL Genes involved in NF-kB is activated and signals survival
0.0 0.4 REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors)
0.0 0.3 REACTOME THROMBOXANE SIGNALLING THROUGH TP RECEPTOR Genes involved in Thromboxane signalling through TP receptor
0.0 0.4 REACTOME RETROGRADE NEUROTROPHIN SIGNALLING Genes involved in Retrograde neurotrophin signalling
0.0 0.4 REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS Genes involved in p130Cas linkage to MAPK signaling for integrins
0.0 0.1 REACTOME CYTOKINE SIGNALING IN IMMUNE SYSTEM Genes involved in Cytokine Signaling in Immune system
0.0 0.7 REACTOME G ALPHA Z SIGNALLING EVENTS Genes involved in G alpha (z) signalling events
0.0 0.3 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.0 0.1 REACTOME CA DEPENDENT EVENTS Genes involved in Ca-dependent events
0.0 0.2 REACTOME ERKS ARE INACTIVATED Genes involved in ERKs are inactivated
0.0 0.2 REACTOME ANDROGEN BIOSYNTHESIS Genes involved in Androgen biosynthesis
0.0 0.2 REACTOME CRMPS IN SEMA3A SIGNALING Genes involved in CRMPs in Sema3A signaling
0.0 0.3 REACTOME GLUCAGON TYPE LIGAND RECEPTORS Genes involved in Glucagon-type ligand receptors
0.0 0.2 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.0 0.2 REACTOME ACTIVATION OF CHAPERONE GENES BY ATF6 ALPHA Genes involved in Activation of Chaperone Genes by ATF6-alpha
0.0 0.5 REACTOME NETRIN1 SIGNALING Genes involved in Netrin-1 signaling
0.0 0.3 REACTOME EFFECTS OF PIP2 HYDROLYSIS Genes involved in Effects of PIP2 hydrolysis
0.0 0.3 REACTOME SIGNALING BY HIPPO Genes involved in Signaling by Hippo
0.0 0.3 REACTOME CHOLESTEROL BIOSYNTHESIS Genes involved in Cholesterol biosynthesis
0.0 0.1 REACTOME REGULATION OF INSULIN SECRETION BY GLUCAGON LIKE PEPTIDE1 Genes involved in Regulation of Insulin Secretion by Glucagon-like Peptide-1
0.0 0.1 REACTOME GLUTAMATE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Glutamate Neurotransmitter Release Cycle
0.0 0.1 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.0 0.0 REACTOME TRAFFICKING OF GLUR2 CONTAINING AMPA RECEPTORS Genes involved in Trafficking of GluR2-containing AMPA receptors
0.0 0.1 REACTOME SIGNALING BY FGFR3 MUTANTS Genes involved in Signaling by FGFR3 mutants
0.0 0.2 REACTOME NOTCH HLH TRANSCRIPTION PATHWAY Genes involved in Notch-HLH transcription pathway
0.0 0.2 REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY Genes involved in Post-chaperonin tubulin folding pathway
0.0 0.6 REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY Genes involved in Nuclear Receptor transcription pathway
0.0 0.1 REACTOME PHASE1 FUNCTIONALIZATION OF COMPOUNDS Genes involved in Phase 1 - Functionalization of compounds
0.0 0.5 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.0 0.1 REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GIP Genes involved in Synthesis, Secretion, and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)
0.0 0.1 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.0 0.1 REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS Genes involved in Proteolytic cleavage of SNARE complex proteins