Project
ENCODE: H3K4me3 ChIP-Seq of different mouse tissues during embryonic development
Navigation
Downloads
Logo

Results for Nr4a3

Z-value: 0.34

Motif logo

logo of

Transcription factors associated with Nr4a3

Gene Symbol Gene ID Gene Info
Nr4a3
ENSMUSG00000028341.3 nuclear receptor subfamily 4, group A, member 3

Correlations of motif activity and signal intensity at CREs associated with the motif's TFs:

This plot shows correlation between observed signal intensity of a CRE associated with the transcription factor across all samples and activity of the motif.

For each TF, only the top 5 correlated CREs are shown.

CRE Gene Distance Association probability Pearson corr. coef. P-value Plot
chr4_48045374_48045835Nr4a33730.8926130.471.7e-04Click!
chr4_48046053_48046770Nr4a311800.5470310.435.6e-04Click!
chr4_48046885_48047647Nr4a318480.4006140.382.5e-03Click!
chr4_48047901_48049197Nr4a35650.8040930.356.3e-03Click!
chr4_48051161_48052389Nr4a35270.8230370.273.5e-02Click!

Activity of the Nr4a3 motif across conditions

Conditions sorted by the z-value of the Nr4a3 motif activity

Move your cursor over a bar to see sample name and corresponding Z-value.

Top target CREs of the motif:

Cis Regulatory Element (CRE) Target Score Top associated gene Gene Info Distance of CRE to TSS CRE/Gene association probability
chrX_170674573_170675954 1.51 Asmt
 acetylserotonin O-methyltransferase
 2619
 0.41
chr6_53817061_53817543 0.73 Gm16499
 predicted gene 16499
 1441
 0.39
chr19_59461344_59461892 0.73 Emx2
 empty spiracles homeobox 2
 1184
 0.42
chr7_99270744_99271357 0.55 Map6
 microtubule-associated protein 6
 1918
 0.23
chr13_28948354_28948958 0.52 Sox4
 SRY (sex determining region Y)-box 4
 5057
 0.24
chr13_53469792_53470715 0.50 Msx2
 msh homeobox 2
 2821
 0.27
chr12_72234504_72235243 0.47 Rtn1
 reticulon 1
 866
 0.66
chr3_84303363_84303817 0.47 Trim2
 tripartite motif-containing 2
 1151
 0.59
chr14_59626952_59628434 0.44 Shisa2
 shisa family member 2
 504
 0.76
chr5_107498769_107499247 0.41 Btbd8
 BTB (POZ) domain containing 8
 1229
 0.33
chr2_6883618_6884699 0.41 Gm13389
 predicted gene 13389
 112
 0.85
chr9_41376046_41377501 0.39 Mir100hg
 Mir100 Mirlet7a-2 Mir125b-1 cluster host gene
 212
 0.93
chr10_21882056_21883261 0.38 Sgk1
 serum/glucocorticoid regulated kinase 1
 289
 0.9
chr9_91386509_91387874 0.37 Zic4
 zinc finger protein of the cerebellum 4
 4781
 0.14
chr3_5213504_5214063 0.37 Gm10748
 predicted gene 10748
 945
 0.56
chr13_31627499_31628464 0.36 Gm27516
 predicted gene, 27516
 1438
 0.26
chr18_15060980_15061427 0.35 Kctd1
 potassium channel tetramerisation domain containing 1
 686
 0.74
chr15_101438228_101439215 0.35 Krt87
 keratin 87
 83
 0.92
chr15_98983254_98984205 0.35 4930578M01Rik
 RIKEN cDNA 4930578M01 gene
 102
 0.93
chrX_136957431_136958031 0.35 Tmsb15b2
 thymosin beta 15b2
 294
 0.8
chr1_62709496_62710533 0.34 Nrp2
 neuropilin 2
 6312
 0.18
chr3_152106774_152107680 0.34 Gipc2
 GIPC PDZ domain containing family, member 2
 195
 0.8
chr10_14759598_14760682 0.33 Nmbr
 neuromedin B receptor
 17
 0.91
chr1_120604474_120605877 0.32 En1
 engrailed 1
 2757
 0.3
chr11_85838795_85841602 0.32 Tbx2
 T-box 2
 7647
 0.13
chr2_52860105_52860808 0.30 Fmnl2
 formin-like 2
 2588
 0.39
chr12_117153278_117156362 0.30 Gm10421
 predicted gene 10421
 3169
 0.37
chr9_43310784_43311614 0.29 Trim29
 tripartite motif-containing 29
 351
 0.87
chr19_44496549_44496948 0.29 Wnt8b
 wingless-type MMTV integration site family, member 8B
 3276
 0.18
chr3_34641628_34643070 0.29 Gm42692
 predicted gene 42692
 915
 0.41
chr10_39532030_39532710 0.29 Fyn
 Fyn proto-oncogene
 900
 0.6
chr2_32605823_32605974 0.28 St6galnac6
 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
 1063
 0.28
chr18_54493213_54493765 0.28 4933434P08Rik
 RIKEN cDNA 4933434P08 gene
 3095
 0.29
chr1_93158156_93158394 0.28 Mab21l4
 mab-21-like 4
 2595
 0.19
chr2_91930544_91931926 0.27 Mdk
 midkine
 453
 0.69
chr2_165137192_165137398 0.27 Gm14397
 predicted gene 14397
 22117
 0.14
chr15_86028772_86030702 0.27 Celsr1
 cadherin, EGF LAG seven-pass G-type receptor 1
 4466
 0.22
chr8_94995272_94995731 0.27 Adgrg1
 adhesion G protein-coupled receptor G1
 160
 0.93
chr5_134101487_134102203 0.27 Castor2
 cytosolic arginine sensor for mTORC1 subunit 2
 1840
 0.26
chr9_27303775_27304036 0.27 Igsf9b
 immunoglobulin superfamily, member 9B
 4677
 0.22
chr10_91967800_91968283 0.27 Gm31592
 predicted gene, 31592
 79212
 0.1
chr9_71896189_71896351 0.26 Tcf12
 transcription factor 12
 126
 0.93
chr3_53043747_53045351 0.26 Gm42901
 predicted gene 42901
 2794
 0.16
chr4_150730352_150730536 0.25 Gm16079
 predicted gene 16079
 51652
 0.12
chr15_77303570_77303965 0.25 Rbfox2
 RNA binding protein, fox-1 homolog (C. elegans) 2
 2838
 0.22
chr1_167687127_167687278 0.25 Lmx1a
 LIM homeobox transcription factor 1 alpha
 2035
 0.44
chr9_91352783_91353195 0.25 A730094K22Rik
 RIKEN cDNA A730094K22 gene
 2036
 0.19
chr16_11068986_11070445 0.25 Snn
 stannin
 3385
 0.13
chrX_136976179_136976867 0.25 Tmsb15l
 thymosin beta 15b like
 346
 0.41
chr7_29310756_29310907 0.24 Dpf1
 D4, zinc and double PHD fingers family 1
 1225
 0.31
chr5_111580966_111582197 0.24 C130026L21Rik
 RIKEN cDNA C130026L21 gene
 13
 0.98
chrX_7919510_7921219 0.24 Pcsk1n
 proprotein convertase subtilisin/kexin type 1 inhibitor
 542
 0.52
chr11_79662174_79662700 0.24 Rab11fip4
 RAB11 family interacting protein 4 (class II)
 1875
 0.21
chr2_29046202_29046836 0.23 Cfap77
 cilia and flagella associated protein 77
 7159
 0.17
chr4_154600279_154600535 0.23 Gm13134
 predicted gene 13134
 790
 0.58
chr1_188149633_188149810 0.23 Gm38315
 predicted gene, 38315
 10986
 0.27
chr5_103393811_103394094 0.23 Ptpn13
 protein tyrosine phosphatase, non-receptor type 13
 31240
 0.14
chr5_45638962_45640180 0.22 Fam184b
 family with sequence similarity 184, member B
 43
 0.69
chr1_106710395_106710955 0.22 Bcl2
 B cell leukemia/lymphoma 2
 2504
 0.31
chr9_111440499_111440650 0.22 Dclk3
 doublecortin-like kinase 3
 1493
 0.42
chr3_156564902_156565177 0.22 Negr1
 neuronal growth regulator 1
 2889
 0.27
chr11_88071226_88071740 0.22 Vezf1
 vascular endothelial zinc finger 1
 2105
 0.21
chr17_33962389_33962540 0.22 Vps52
 VPS52 GARP complex subunit
 716
 0.29
chr10_79636527_79636678 0.21 Gm47163
 predicted gene, 47163
 1254
 0.21
chr2_110949491_110950578 0.21 Ano3
 anoctamin 3
 338
 0.92
chr1_44199495_44199646 0.21 Gm15833
 predicted gene 15833
 12592
 0.15
chr16_95673997_95674148 0.21 Ets2
 E26 avian leukemia oncogene 2, 3' domain
 28003
 0.19
chr4_22480645_22481269 0.21 Pou3f2
 POU domain, class 3, transcription factor 2
 7409
 0.17
chr11_21999976_22000574 0.21 Otx1
 orthodenticle homeobox 1
 1340
 0.53
chr12_3891782_3892977 0.21 Dnmt3a
 DNA methyltransferase 3A
 635
 0.69
chr14_98164357_98165375 0.21 Dach1
 dachshund family transcription factor 1
 4677
 0.28
chr2_25708979_25709130 0.21 A230005M16Rik
 RIKEN cDNA A230005M16 gene
 662
 0.44
chr2_181313043_181314281 0.21 Stmn3
 stathmin-like 3
 838
 0.42
chr6_13835523_13837039 0.21 Gpr85
 G protein-coupled receptor 85
 960
 0.59
chr7_93085111_93085503 0.21 Gm9934
 predicted gene 9934
 4280
 0.2
chr10_45808761_45809150 0.20 D030045P18Rik
 RIKEN cDNA D030045P18 gene
 1251
 0.49
chr3_87949543_87950464 0.20 Crabp2
 cellular retinoic acid binding protein II
 1337
 0.25
chr19_5606660_5606811 0.20 Kat5
 K(lysine) acetyltransferase 5
 1535
 0.19
chr15_103522891_103523042 0.20 Pde1b
 phosphodiesterase 1B, Ca2+-calmodulin dependent
 752
 0.57
chr6_55010251_55010633 0.20 Ggct
 gamma-glutamyl cyclotransferase
 17492
 0.15
chr3_86858235_86858443 0.20 Gm37025
 predicted gene, 37025
 6153
 0.21
chr5_144547334_144548656 0.20 Nptx2
 neuronal pentraxin 2
 2093
 0.41
chr11_77936512_77937218 0.20 Sez6
 seizure related gene 6
 5826
 0.14
chr18_43175442_43176118 0.20 4930588A03Rik
 RIKEN cDNA 4930588A03 gene
 4506
 0.2
chr6_127870846_127870997 0.20 Gm38901
 predicted gene, 38901
 6325
 0.16
chr17_17830971_17831711 0.19 Spaca6
 sperm acrosome associated 6
 103
 0.78
chr8_25545899_25546050 0.19 Gm16159
 predicted gene 16159
 7586
 0.11
chr8_47284401_47285223 0.19 Stox2
 storkhead box 2
 4550
 0.27
chr10_81417616_81418054 0.19 Mir1191b
 microRNA 1191b
 1538
 0.15
chr13_46161372_46162144 0.19 Gm10113
 predicted gene 10113
 29288
 0.21
chr19_15903714_15904400 0.19 Psat1
 phosphoserine aminotransferase 1
 5655
 0.23
chr12_73043242_73043393 0.19 Six1
 sine oculis-related homeobox 1
 502
 0.81
chr11_23495316_23495877 0.18 Ahsa2
 AHA1, activator of heat shock protein ATPase 2
 1942
 0.18
chr1_194622071_194623282 0.18 Plxna2
 plexin A2
 2851
 0.26
chr2_74691003_74692289 0.18 Hoxd10
 homeobox D10
 278
 0.7
chr10_80188763_80188923 0.18 Efna2
 ephrin A2
 9361
 0.08
chr2_13129875_13130250 0.18 Gm38156
 predicted gene, 38156
 11627
 0.19
chr13_72632318_72633242 0.18 Irx2
 Iroquois homeobox 2
 183
 0.95
chr2_170734259_170734932 0.18 Dok5
 docking protein 5
 2788
 0.35
chr8_84178723_84178952 0.18 Mir181d
 microRNA 181d
 50
 0.57
chr2_157696327_157696590 0.18 Gm25407
 predicted gene, 25407
 17343
 0.16
chr5_26210819_26210970 0.18 Gm7361
 predicted gene 7361
 46797
 0.13
chr7_128474182_128474654 0.18 Gm32816
 predicted gene, 32816
 200
 0.89
chr11_120293329_120293641 0.18 Bahcc1
 BAH domain and coiled-coil containing 1
 3692
 0.13
chr10_67094914_67095382 0.18 Jmjd1c
 jumonji domain containing 1C
 977
 0.49
chr2_33369536_33369687 0.18 Ralgps1
 Ral GEF with PH domain and SH3 binding motif 1
 1818
 0.3
chr7_126364984_126365135 0.17 Lat
 linker for activation of T cells
 173
 0.89
chr11_101084072_101084686 0.17 Coasy
 Coenzyme A synthase
 484
 0.59
chr7_45304558_45305606 0.17 Trpm4
 transient receptor potential cation channel, subfamily M, member 4
 122
 0.9
chr1_159524626_159524870 0.17 Tnr
 tenascin R
 907
 0.65
chr5_138606179_138606361 0.17 Gm24082
 predicted gene, 24082
 429
 0.59
chr16_94141250_94141643 0.17 Sim2
 single-minded family bHLH transcription factor 2
 16265
 0.12
chr13_52976109_52977372 0.17 Nfil3
 nuclear factor, interleukin 3, regulated
 4333
 0.2
chr6_120716777_120717027 0.17 Cecr2
 CECR2, histone acetyl-lysine reader
 17656
 0.17
chr3_132017605_132018083 0.17 Gm22421
 predicted gene, 22421
 64548
 0.12
chr18_37755572_37756990 0.17 Gm26672
 predicted gene, 26672
 67
 0.83
chr2_27353287_27353438 0.17 Vav2
 vav 2 oncogene
 8882
 0.17
chr13_23552480_23553015 0.17 H1f3
 H1.3 linker histone, cluster member
 515
 0.38
chr9_42121573_42122781 0.17 Sorl1
 sortilin-related receptor, LDLR class A repeats-containing
 2120
 0.33
chr4_24245083_24245586 0.17 Gm11892
 predicted gene 11892
 7234
 0.32
chr1_118983510_118983661 0.17 Gli2
 GLI-Kruppel family member GLI2
 997
 0.6
chr2_180343222_180343937 0.16 Gata5
 GATA binding protein 5
 8880
 0.12
chr17_35909041_35910037 0.16 Atat1
 alpha tubulin acetyltransferase 1
 34
 0.91
chr6_37592234_37592983 0.16 Gm7463
 predicted gene 7463
 51194
 0.14
chr17_35244956_35245392 0.16 Mir6975
 microRNA 6975
 1099
 0.17
chr18_43394505_43395255 0.16 Dpysl3
 dihydropyrimidinase-like 3
 1503
 0.46
chr19_17834325_17834699 0.16 Pcsk5
 proprotein convertase subtilisin/kexin type 5
 3105
 0.24
chr12_111694916_111695235 0.16 Gm36635
 predicted gene, 36635
 8007
 0.1
chr12_118855278_118855595 0.16 Sp8
 trans-acting transcription factor 8
 7850
 0.22
chr14_52016551_52017265 0.16 Tmem253
 transmembrane protein 253
 11
 0.93
chr8_114603657_114603808 0.16 Wwox
 WW domain-containing oxidoreductase
 4704
 0.23
chr16_33941271_33941422 0.16 Itgb5
 integrin beta 5
 5178
 0.18
chr3_94480513_94480707 0.16 Riiad1
 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
 269
 0.78
chr1_75313516_75313667 0.16 Dnpep
 aspartyl aminopeptidase
 168
 0.9
chr2_74732545_74733279 0.16 Hoxd3
 homeobox D3
 1
 0.92
chr4_106915225_106915605 0.15 Ssbp3
 single-stranded DNA binding protein 3
 3117
 0.27
chr15_83710142_83710772 0.15 Scube1
 signal peptide, CUB domain, EGF-like 1
 14469
 0.21
chr18_60645927_60646078 0.15 Synpo
 synaptopodin
 2270
 0.28
chr16_6841576_6842071 0.15 Rbfox1
 RNA binding protein, fox-1 homolog (C. elegans) 1
 32601
 0.26
chr2_25353478_25353940 0.15 Dpp7
 dipeptidylpeptidase 7
 835
 0.33
chr2_127401705_127401856 0.15 Gpat2
 glycerol-3-phosphate acyltransferase 2, mitochondrial
 23419
 0.12
chr4_139819504_139819950 0.15 Pax7
 paired box 7
 13280
 0.22
chr19_22692617_22693990 0.15 Trpm3
 transient receptor potential cation channel, subfamily M, member 3
 481
 0.87
chr19_46152579_46153392 0.15 Gbf1
 golgi-specific brefeldin A-resistance factor 1
 405
 0.77
chr2_93641010_93641161 0.15 Alx4
 aristaless-like homeobox 4
 1299
 0.54
chr2_74737192_74739622 0.15 Hoxd3
 homeobox D3
 1212
 0.2
chr14_50896223_50897440 0.15 Klhl33
 kelch-like 33
 625
 0.49
chr5_115585775_115585926 0.15 Gcn1
 GCN1 activator of EIF2AK4
 3453
 0.13
chr13_94912810_94913359 0.15 Otp
 orthopedia homeobox
 30484
 0.15
chr3_129194633_129194876 0.15 Pitx2
 paired-like homeodomain transcription factor 2
 5124
 0.2
chr4_129226645_129228191 0.15 C77080
 expressed sequence C77080
 62
 0.96
chr2_30137332_30137483 0.14 Tbc1d13
 TBC1 domain family, member 13
 377
 0.75
chr2_4303011_4303677 0.14 Gm13187
 predicted gene 13187
 2177
 0.24
chr5_96071564_96071715 0.14 Cnot6l
 CCR4-NOT transcription complex, subunit 6-like
 15294
 0.23
chr17_44810813_44811180 0.14 Runx2
 runt related transcription factor 2
 3230
 0.26
chr16_21205203_21206094 0.14 Ephb3
 Eph receptor B3
 893
 0.56
chr5_13127277_13127474 0.14 Sema3a
 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
 1782
 0.32
chr2_30808018_30809041 0.14 Ntmt1
 N-terminal Xaa-Pro-Lys N-methyltransferase 1
 339
 0.81
chr16_29054299_29054758 0.14 Gm8253
 predicted gene 8253
 103173
 0.07
chr17_16483864_16484015 0.14 Gm4786
 predicted gene 4786
 73307
 0.12
chr12_99229579_99229730 0.14 Gm19898
 predicted gene, 19898
 16017
 0.18
chr10_13982681_13983672 0.14 Hivep2
 human immunodeficiency virus type I enhancer binding protein 2
 16152
 0.19
chr11_69911679_69911838 0.14 Neurl4
 neuralized E3 ubiquitin protein ligase 4
 722
 0.32
chr1_172485277_172486996 0.14 Igsf9
 immunoglobulin superfamily, member 9
 3822
 0.12
chr13_78174144_78174519 0.14 3110006O06Rik
 RIKEN cDNA 3110006O06 gene
 2701
 0.19
chr1_172206683_172207090 0.14 Pea15a
 phosphoprotein enriched in astrocytes 15A
 82
 0.94
chr14_67414469_67414620 0.14 4930438E09Rik
 RIKEN cDNA 4930438E09 gene
 16802
 0.17
chr6_84134951_84135267 0.14 Dysf
 dysferlin
 11638
 0.19
chr10_110454344_110454630 0.13 Nav3
 neuron navigator 3
 1717
 0.42
chr13_54685334_54685505 0.13 Rnf44
 ring finger protein 44
 1012
 0.43
chr1_92177475_92177971 0.13 Hdac4
 histone deacetylase 4
 2574
 0.37
chr1_172204323_172204753 0.13 Pea15a
 phosphoprotein enriched in astrocytes 15A
 2159
 0.17
chr19_59452548_59452741 0.13 Emx2
 empty spiracles homeobox 2
 5728
 0.17
chr1_106629507_106629751 0.13 Gm37053
 predicted gene, 37053
 22759
 0.19
chr7_25402412_25402872 0.13 Lipe
 lipase, hormone sensitive
 3932
 0.11
chr15_100825105_100825748 0.13 Gm35569
 predicted gene, 35569
 6965
 0.16
chr2_157561445_157562129 0.13 Gm23134
 predicted gene, 23134
 660
 0.4
chr4_129495840_129495991 0.13 Fam229a
 family with sequence similarity 229, member A
 4675
 0.1
chr15_102512807_102512958 0.13 Map3k12
 mitogen-activated protein kinase kinase kinase 12
 2090
 0.16
chr7_145222634_145222785 0.13 Smim38
 small integral membrane protein 38
 14590
 0.2
chr7_126276115_126276973 0.13 Sbk1
 SH3-binding kinase 1
 3144
 0.16
chr13_113918234_113918803 0.13 Arl15
 ADP-ribosylation factor-like 15
 123896
 0.05
chr7_19634772_19634923 0.13 Clptm1
 cleft lip and palate associated transmembrane protein 1
 1330
 0.24
chr2_164792559_164792710 0.13 Snx21
 sorting nexin family member 21
 982
 0.28
chr11_109478129_109478280 0.13 Slc16a6
 solute carrier family 16 (monocarboxylic acid transporters), member 6
 4606
 0.13
chr12_111412598_111413452 0.13 Exoc3l4
 exocyst complex component 3-like 4
 3992
 0.14
chr11_120616897_120617872 0.13 Pcyt2
 phosphate cytidylyltransferase 2, ethanolamine
 485
 0.48
chr16_34744940_34746455 0.13 Mylk
 myosin, light polypeptide kinase
 487
 0.85
chr13_18948406_18949248 0.13 Amph
 amphiphysin
 429
 0.8
chr15_79161202_79161377 0.13 Sox10
 SRY (sex determining region Y)-box 10
 3185
 0.12
chr3_66972322_66972982 0.12 Shox2
 short stature homeobox 2
 5795
 0.18
chr17_35907096_35907253 0.12 Atat1
 alpha tubulin acetyltransferase 1
 1787
 0.11
chr4_134779342_134779493 0.12 Ldlrap1
 low density lipoprotein receptor adaptor protein 1
 11393
 0.19
chr15_25407259_25407806 0.12 Basp1
 brain abundant, membrane attached signal protein 1
 6166
 0.16
chr7_46399032_46399239 0.12 Kcnc1
 potassium voltage gated channel, Shaw-related subfamily, member 1
 1487
 0.35
chr1_192190419_192191087 0.12 Kcnh1
 potassium voltage-gated channel, subfamily H (eag-related), member 1
 21
 0.98
chr7_28814945_28816569 0.12 Hnrnpl
 heterogeneous nuclear ribonucleoprotein L
 651
 0.47
chr19_46714952_46715103 0.12 As3mt
 arsenic (+3 oxidation state) methyltransferase
 3055
 0.19
chr6_137570111_137570964 0.12 Eps8
 epidermal growth factor receptor pathway substrate 8
 222
 0.95
chr15_37432615_37433119 0.12 Gm15941
 predicted gene 15941
 203
 0.91

Histogram of CRE-TSS distances for CREs targeted by :

Histogram of

Rank distribution of CRE target scores:

Histogram of target CRE score.

Distribution of target CREs across different genomic regions:

Weighted Piechart of Weighted Piechart of Weighted Piechart of

Network of associatons between targets according to the STRING database.

First level regulatory network of Nr4a3

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:2000019 negative regulation of male gonad development(GO:2000019)
0.1 0.3 GO:0043402 glucocorticoid mediated signaling pathway(GO:0043402)
0.1 0.2 GO:0030421 defecation(GO:0030421)
0.1 0.2 GO:0021586 pons maturation(GO:0021586)
0.1 0.2 GO:2001055 positive regulation of mesenchymal cell apoptotic process(GO:2001055)
0.1 0.2 GO:0021615 glossopharyngeal nerve morphogenesis(GO:0021615)
0.1 0.3 GO:0061551 trigeminal ganglion development(GO:0061551)
0.1 0.2 GO:1904179 positive regulation of adipose tissue development(GO:1904179)
0.1 0.2 GO:0035910 ascending aorta development(GO:0035905) ascending aorta morphogenesis(GO:0035910)
0.0 0.4 GO:0042989 sequestering of actin monomers(GO:0042989)
0.0 0.2 GO:0060414 aorta smooth muscle tissue morphogenesis(GO:0060414)
0.0 0.0 GO:0060800 regulation of cell differentiation involved in embryonic placenta development(GO:0060800)
0.0 0.1 GO:0035964 COPI-coated vesicle budding(GO:0035964)
0.0 0.1 GO:0048682 axon extension involved in regeneration(GO:0048677) sprouting of injured axon(GO:0048682)
0.0 0.1 GO:0070358 actin polymerization-dependent cell motility(GO:0070358)
0.0 0.2 GO:0061591 calcium activated phospholipid scrambling(GO:0061588) calcium activated phosphatidylcholine scrambling(GO:0061590) calcium activated galactosylceramide scrambling(GO:0061591)
0.0 0.6 GO:0021542 dentate gyrus development(GO:0021542)
0.0 0.1 GO:0061743 motor learning(GO:0061743)
0.0 0.1 GO:0046499 S-adenosylmethioninamine metabolic process(GO:0046499)
0.0 0.1 GO:0033505 floor plate morphogenesis(GO:0033505)
0.0 0.1 GO:0046813 receptor-mediated virion attachment to host cell(GO:0046813)
0.0 0.1 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.0 0.1 GO:0048852 diencephalon morphogenesis(GO:0048852)
0.0 0.0 GO:0048880 sensory system development(GO:0048880)
0.0 0.1 GO:0010528 regulation of transposition(GO:0010528) negative regulation of transposition(GO:0010529)
0.0 0.1 GO:0000160 phosphorelay signal transduction system(GO:0000160)
0.0 0.4 GO:0040037 negative regulation of fibroblast growth factor receptor signaling pathway(GO:0040037)
0.0 0.1 GO:0070309 lens fiber cell morphogenesis(GO:0070309)
0.0 0.0 GO:0001698 gastrin-induced gastric acid secretion(GO:0001698)
0.0 0.1 GO:0035021 negative regulation of Rac protein signal transduction(GO:0035021)
0.0 0.1 GO:0036066 protein O-linked fucosylation(GO:0036066)
0.0 0.1 GO:0050882 voluntary musculoskeletal movement(GO:0050882)
0.0 0.1 GO:0060448 dichotomous subdivision of terminal units involved in lung branching(GO:0060448)
0.0 0.1 GO:2001201 transforming growth factor-beta secretion(GO:0038044) regulation of transforming growth factor-beta secretion(GO:2001201)
0.0 0.1 GO:0051388 positive regulation of neurotrophin TRK receptor signaling pathway(GO:0051388)
0.0 0.1 GO:1902416 positive regulation of mRNA binding(GO:1902416) positive regulation of RNA binding(GO:1905216)
0.0 0.1 GO:1902996 neurofibrillary tangle assembly(GO:1902988) regulation of neurofibrillary tangle assembly(GO:1902996)
0.0 0.1 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.1 GO:0021847 ventricular zone neuroblast division(GO:0021847)
0.0 0.1 GO:0006363 termination of RNA polymerase I transcription(GO:0006363)
0.0 0.1 GO:0032025 response to cobalt ion(GO:0032025)
0.0 0.2 GO:0048935 peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935)
0.0 0.1 GO:0046959 habituation(GO:0046959)
0.0 0.1 GO:0032485 regulation of Ral protein signal transduction(GO:0032485)
0.0 0.1 GO:0048743 positive regulation of skeletal muscle fiber development(GO:0048743)
0.0 0.3 GO:1902043 positive regulation of extrinsic apoptotic signaling pathway via death domain receptors(GO:1902043)
0.0 0.1 GO:0030718 germ-line stem cell population maintenance(GO:0030718)
0.0 0.0 GO:0016554 cytidine to uridine editing(GO:0016554)
0.0 0.0 GO:1902445 regulation of mitochondrial membrane permeability involved in programmed necrotic cell death(GO:1902445)
0.0 0.1 GO:0010668 ectodermal cell differentiation(GO:0010668)
0.0 0.0 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.0 0.0 GO:0060154 cellular process regulating host cell cycle in response to virus(GO:0060154)
0.0 0.1 GO:0021979 hypothalamus cell differentiation(GO:0021979)
0.0 0.1 GO:0036005 response to macrophage colony-stimulating factor(GO:0036005) cellular response to macrophage colony-stimulating factor stimulus(GO:0036006)
0.0 0.1 GO:0060244 negative regulation of cell proliferation involved in contact inhibition(GO:0060244)
0.0 0.1 GO:0010724 regulation of definitive erythrocyte differentiation(GO:0010724)
0.0 0.0 GO:0060460 left lung morphogenesis(GO:0060460) endodermal digestive tract morphogenesis(GO:0061031)
0.0 0.2 GO:0036119 response to platelet-derived growth factor(GO:0036119) cellular response to platelet-derived growth factor stimulus(GO:0036120)
0.0 0.2 GO:0007342 fusion of sperm to egg plasma membrane(GO:0007342)
0.0 0.0 GO:0072531 pyrimidine-containing compound transmembrane transport(GO:0072531)
0.0 0.0 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.0 0.0 GO:1903598 positive regulation of gap junction assembly(GO:1903598)
0.0 0.1 GO:0034983 peptidyl-lysine deacetylation(GO:0034983)
0.0 0.0 GO:0006046 N-acetylglucosamine catabolic process(GO:0006046)
0.0 0.1 GO:0051386 regulation of neurotrophin TRK receptor signaling pathway(GO:0051386)
0.0 0.0 GO:1901538 DNA methylation involved in embryo development(GO:0043045) changes to DNA methylation involved in embryo development(GO:1901538)
0.0 0.0 GO:0060160 negative regulation of dopamine receptor signaling pathway(GO:0060160)
0.0 0.1 GO:0070314 G1 to G0 transition(GO:0070314)
0.0 0.1 GO:0090435 protein localization to nuclear envelope(GO:0090435)
0.0 0.0 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.0 0.1 GO:0060670 branching involved in labyrinthine layer morphogenesis(GO:0060670)
0.0 0.0 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.1 GO:0051764 actin crosslink formation(GO:0051764)
0.0 0.2 GO:0016486 peptide hormone processing(GO:0016486)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0097427 microtubule bundle(GO:0097427)
0.0 0.1 GO:0072534 perineuronal net(GO:0072534)
0.0 0.3 GO:0017146 NMDA selective glutamate receptor complex(GO:0017146)
0.0 0.1 GO:0046696 lipopolysaccharide receptor complex(GO:0046696)
0.0 0.1 GO:0071547 piP-body(GO:0071547)
0.0 0.1 GO:0012507 ER to Golgi transport vesicle membrane(GO:0012507)
0.0 0.1 GO:1990745 EARP complex(GO:1990745)
0.0 0.1 GO:0071953 elastic fiber(GO:0071953)
0.0 0.1 GO:0043203 axon hillock(GO:0043203)
0.0 0.4 GO:0031941 filamentous actin(GO:0031941)
0.0 0.0 GO:0090661 box H/ACA telomerase RNP complex(GO:0090661)
0.0 0.0 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.0 0.3 GO:0005790 smooth endoplasmic reticulum(GO:0005790)
0.0 0.1 GO:0035253 ciliary rootlet(GO:0035253)
0.0 0.1 GO:0097542 ciliary tip(GO:0097542)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0043423 3-phosphoinositide-dependent protein kinase binding(GO:0043423)
0.1 0.3 GO:0004946 bombesin receptor activity(GO:0004946)
0.0 0.1 GO:0051718 DNA (cytosine-5-)-methyltransferase activity(GO:0003886) DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates(GO:0051718)
0.0 0.1 GO:0048101 calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity(GO:0048101)
0.0 0.2 GO:0042609 CD4 receptor binding(GO:0042609)
0.0 0.1 GO:0004471 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471)
0.0 0.2 GO:0004972 NMDA glutamate receptor activity(GO:0004972)
0.0 0.1 GO:0000155 phosphorelay sensor kinase activity(GO:0000155)
0.0 0.1 GO:0004687 myosin light chain kinase activity(GO:0004687)
0.0 0.1 GO:0004886 9-cis retinoic acid receptor activity(GO:0004886)
0.0 0.3 GO:0035497 cAMP response element binding(GO:0035497)
0.0 0.1 GO:0001075 transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly(GO:0001075)
0.0 0.4 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.1 GO:1990715 mRNA CDS binding(GO:1990715)
0.0 0.1 GO:0004969 histamine receptor activity(GO:0004969)
0.0 0.1 GO:0015038 glutathione disulfide oxidoreductase activity(GO:0015038)
0.0 0.1 GO:0071532 ankyrin repeat binding(GO:0071532)
0.0 0.1 GO:0001665 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity(GO:0001665)
0.0 0.1 GO:0008321 Ral guanyl-nucleotide exchange factor activity(GO:0008321)
0.0 0.1 GO:0070548 L-glutamine aminotransferase activity(GO:0070548)
0.0 0.1 GO:0003846 2-acylglycerol O-acyltransferase activity(GO:0003846)
0.0 0.3 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.2 GO:0050811 GABA receptor binding(GO:0050811)
0.0 0.1 GO:0051434 BH3 domain binding(GO:0051434)
0.0 0.2 GO:0017128 phospholipid scramblase activity(GO:0017128)
0.0 0.1 GO:0004111 creatine kinase activity(GO:0004111)
0.0 0.1 GO:0005005 transmembrane-ephrin receptor activity(GO:0005005)
0.0 0.1 GO:0030306 ADP-ribosylation factor binding(GO:0030306)
0.0 0.1 GO:0070051 fibrinogen binding(GO:0070051)
0.0 0.1 GO:0017154 semaphorin receptor activity(GO:0017154)
0.0 0.2 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.0 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.0 0.0 GO:0004083 bisphosphoglycerate 2-phosphatase activity(GO:0004083)
0.0 0.0 GO:0000213 tRNA-intron endonuclease activity(GO:0000213)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 PID EPHB FWD PATHWAY EPHB forward signaling
0.0 0.6 PID PI3KCI PATHWAY Class I PI3K signaling events
0.0 0.1 PID RET PATHWAY Signaling events regulated by Ret tyrosine kinase

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME CRMPS IN SEMA3A SIGNALING Genes involved in CRMPs in Sema3A signaling
0.0 0.0 REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GIP Genes involved in Synthesis, Secretion, and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)
0.0 0.3 REACTOME MYOGENESIS Genes involved in Myogenesis
0.0 0.0 REACTOME SIGNALING BY EGFR IN CANCER Genes involved in Signaling by EGFR in Cancer
0.0 0.2 REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION Genes involved in Unblocking of NMDA receptor, glutamate binding and activation
0.0 0.1 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.0 0.0 REACTOME OLFACTORY SIGNALING PATHWAY Genes involved in Olfactory Signaling Pathway
0.0 0.0 REACTOME SIGNALING BY FGFR Genes involved in Signaling by FGFR