CRE | Gene | Distance | Association probability | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|---|---|
chr19_5553860_5554011 | Ovol1 | 5468 | 0.075927 | -0.25 | 5.2e-02 | Click! |
chr19_5554528_5554679 | Ovol1 | 4800 | 0.078807 | -0.27 | 3.4e-02 | Click! |
chr19_5556785_5556936 | Ovol1 | 2543 | 0.107380 | -0.22 | 9.7e-02 | Click! |
chr19_5557059_5557212 | Ovol1 | 2268 | 0.116870 | -0.24 | 7.0e-02 | Click! |
chr19_5557621_5557772 | Ovol1 | 1707 | 0.150040 | -0.24 | 6.9e-02 | Click! |
Cis Regulatory Element (CRE) | Target Score | Top associated gene | Gene Info | Distance of CRE to TSS | CRE/Gene association probability |
---|---|---|---|---|---|
chr3_153851643_153852027 | 7.75 |
Asb17os |
ankyrin repeat and SOCS box-containing 17, opposite strand |
566 |
0.59 |
chr11_103013495_103014790 | 6.26 |
Dcakd |
dephospho-CoA kinase domain containing |
3026 |
0.16 |
chr16_18429039_18430122 | 3.39 |
Txnrd2 |
thioredoxin reductase 2 |
655 |
0.54 |
chr9_113969760_113969977 | 3.28 |
Ubp1 |
upstream binding protein 1 |
643 |
0.58 |
chrX_85613609_85614890 | 3.11 |
Gm44378 |
predicted gene, 44378 |
25272 |
0.18 |
chr2_173024069_173026002 | 2.88 |
Rbm38 |
RNA binding motif protein 38 |
1985 |
0.21 |
chr11_78072614_78073453 | 2.87 |
Mir144 |
microRNA 144 |
28 |
0.51 |
chr7_110773542_110774597 | 2.77 |
Ampd3 |
adenosine monophosphate deaminase 3 |
175 |
0.93 |
chr14_55061871_55064122 | 2.55 |
Gm20687 |
predicted gene 20687 |
7503 |
0.08 |
chr2_35333839_35333990 | 2.40 |
Stom |
stomatin |
3062 |
0.18 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.5 | GO:0001574 | ganglioside biosynthetic process(GO:0001574) |
0.4 | 3.4 | GO:0070269 | pyroptosis(GO:0070269) |
0.7 | 2.6 | GO:0032264 | IMP salvage(GO:0032264) |
0.1 | 2.1 | GO:0000305 | response to oxygen radical(GO:0000305) |
0.1 | 2.0 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
0.6 | 1.9 | GO:1900169 | regulation of glucocorticoid mediated signaling pathway(GO:1900169) |
0.0 | 1.9 | GO:0045454 | cell redox homeostasis(GO:0045454) |
0.1 | 1.8 | GO:0033539 | fatty acid beta-oxidation using acyl-CoA dehydrogenase(GO:0033539) |
0.1 | 1.8 | GO:0006779 | porphyrin-containing compound biosynthetic process(GO:0006779) tetrapyrrole biosynthetic process(GO:0033014) |
0.4 | 1.6 | GO:0010897 | negative regulation of triglyceride catabolic process(GO:0010897) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.7 | GO:0005739 | mitochondrion(GO:0005739) |
0.1 | 4.1 | GO:0030173 | integral component of Golgi membrane(GO:0030173) |
0.0 | 3.6 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
0.0 | 3.3 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.5 | 3.2 | GO:0072557 | IPAF inflammasome complex(GO:0072557) |
0.1 | 2.9 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.0 | 2.9 | GO:0035068 | micro-ribonucleoprotein complex(GO:0035068) |
0.0 | 2.9 | GO:0031966 | mitochondrial membrane(GO:0031966) |
0.0 | 2.2 | GO:0042579 | peroxisome(GO:0005777) microbody(GO:0042579) |
0.0 | 2.2 | GO:0031965 | nuclear membrane(GO:0031965) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 3.5 | GO:0003836 | beta-galactoside (CMP) alpha-2,3-sialyltransferase activity(GO:0003836) |
0.2 | 3.1 | GO:0005229 | intracellular calcium activated chloride channel activity(GO:0005229) |
0.0 | 3.1 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.9 | 2.6 | GO:0003876 | AMP deaminase activity(GO:0003876) adenosine-phosphate deaminase activity(GO:0047623) |
0.0 | 2.5 | GO:0008766 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity(GO:0008766) ribosomal S6-glutamic acid ligase activity(GO:0018169) coenzyme F420-0 gamma-glutamyl ligase activity(GO:0043773) coenzyme F420-2 alpha-glutamyl ligase activity(GO:0043774) protein-glycine ligase activity(GO:0070735) protein-glycine ligase activity, initiating(GO:0070736) protein-glycine ligase activity, elongating(GO:0070737) tubulin-glycine ligase activity(GO:0070738) |
0.0 | 2.4 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.3 | 2.0 | GO:0003997 | acyl-CoA oxidase activity(GO:0003997) |
0.1 | 2.0 | GO:0001205 | transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205) |
0.3 | 1.9 | GO:0005078 | MAP-kinase scaffold activity(GO:0005078) |
0.1 | 1.9 | GO:0016208 | AMP binding(GO:0016208) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.4 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.1 | 4.1 | PID EPO PATHWAY | EPO signaling pathway |
0.1 | 3.3 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.1 | 3.1 | PID BCR 5PATHWAY | BCR signaling pathway |
0.0 | 2.5 | PID HDAC CLASSI PATHWAY | Signaling events mediated by HDAC Class I |
0.1 | 2.2 | PID IL2 PI3K PATHWAY | IL2 signaling events mediated by PI3K |
0.1 | 1.8 | PID IL8 CXCR1 PATHWAY | IL8- and CXCR1-mediated signaling events |
0.2 | 1.6 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.0 | 1.5 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
0.0 | 1.4 | PID ATR PATHWAY | ATR signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 3.5 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.1 | 3.0 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.0 | 3.0 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.2 | 2.9 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.2 | 2.7 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 7ALPHA HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol |
0.0 | 2.4 | REACTOME MRNA PROCESSING | Genes involved in mRNA Processing |
0.0 | 2.2 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.1 | 2.0 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.1 | 2.0 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.0 | 2.0 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |