CRE | Gene | Distance | Association probability | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|---|---|
chr10_128270029_128270374 | Stat2 | 358 | 0.661735 | 0.27 | 3.6e-02 | Click! |
chr10_128270577_128271045 | Stat2 | 235 | 0.798500 | -0.21 | 1.1e-01 | Click! |
chr10_128271586_128271845 | Stat2 | 1139 | 0.234820 | 0.52 | 2.0e-05 | Click! |
chr10_128283615_128283766 | Stat2 | 120 | 0.896580 | 0.07 | 5.7e-01 | Click! |
chr10_128290761_128291043 | Stat2 | 6795 | 0.069662 | -0.07 | 6.2e-01 | Click! |
Cis Regulatory Element (CRE) | Target Score | Top associated gene | Gene Info | Distance of CRE to TSS | CRE/Gene association probability |
---|---|---|---|---|---|
chr2_39325776_39326109 | 7.20 |
Vmn2r-ps2 |
vomeronasal 2, receptor, pseudogene 2 |
51836 |
0.11 |
chr19_8518372_8518525 | 6.80 |
Gm8189 |
predicted gene 8189 |
23350 |
0.14 |
chr4_100994515_100995079 | 6.76 |
Cachd1 |
cache domain containing 1 |
87 |
0.97 |
chr7_115845255_115845445 | 6.70 |
Sox6 |
SRY (sex determining region Y)-box 6 |
755 |
0.78 |
chr7_78913499_78914279 | 6.64 |
Isg20 |
interferon-stimulated protein |
92 |
0.95 |
chr8_121082801_121085531 | 6.43 |
Foxf1 |
forkhead box F1 |
220 |
0.71 |
chr8_85378903_85379213 | 6.41 |
Mylk3 |
myosin light chain kinase 3 |
1920 |
0.25 |
chr4_11146992_11147797 | 5.92 |
Gm11830 |
predicted gene 11830 |
2684 |
0.17 |
chrX_7966827_7967869 | 5.89 |
Gata1 |
GATA binding protein 1 |
562 |
0.55 |
chr12_110498335_110499098 | 5.67 |
Gm19605 |
predicted gene, 19605 |
12508 |
0.16 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 35.9 | GO:0045071 | negative regulation of viral genome replication(GO:0045071) |
1.7 | 14.9 | GO:0070269 | pyroptosis(GO:0070269) |
0.3 | 7.3 | GO:0035456 | response to interferon-beta(GO:0035456) |
1.4 | 5.7 | GO:0051919 | positive regulation of fibrinolysis(GO:0051919) |
0.2 | 5.7 | GO:0006491 | N-glycan processing(GO:0006491) |
0.6 | 5.5 | GO:0035457 | cellular response to interferon-alpha(GO:0035457) |
0.2 | 5.5 | GO:0050829 | defense response to Gram-negative bacterium(GO:0050829) |
1.7 | 5.2 | GO:0043321 | regulation of natural killer cell degranulation(GO:0043321) |
1.5 | 4.5 | GO:0034165 | positive regulation of toll-like receptor 9 signaling pathway(GO:0034165) |
1.5 | 4.4 | GO:0048371 | lateral mesoderm morphogenesis(GO:0048369) lateral mesoderm formation(GO:0048370) lateral mesodermal cell differentiation(GO:0048371) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.4 | 14.4 | GO:0072557 | IPAF inflammasome complex(GO:0072557) |
0.1 | 8.0 | GO:0016363 | nuclear matrix(GO:0016363) |
0.2 | 7.5 | GO:0015030 | Cajal body(GO:0015030) |
0.8 | 7.4 | GO:0020003 | symbiont-containing vacuole(GO:0020003) |
0.1 | 7.1 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.1 | 6.5 | GO:0072562 | blood microparticle(GO:0072562) |
0.1 | 6.2 | GO:0042641 | actomyosin(GO:0042641) |
0.8 | 5.0 | GO:0014731 | spectrin-associated cytoskeleton(GO:0014731) |
0.0 | 4.7 | GO:0005667 | transcription factor complex(GO:0005667) |
0.1 | 4.0 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 20.8 | GO:0003924 | GTPase activity(GO:0003924) |
0.0 | 13.9 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
0.7 | 8.0 | GO:0001730 | 2'-5'-oligoadenylate synthetase activity(GO:0001730) |
0.4 | 7.4 | GO:0003950 | NAD+ ADP-ribosyltransferase activity(GO:0003950) |
2.1 | 6.4 | GO:0008310 | single-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008310) |
0.1 | 6.2 | GO:0033613 | activating transcription factor binding(GO:0033613) |
1.1 | 5.4 | GO:0008454 | alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0008454) |
1.1 | 5.4 | GO:0042015 | interleukin-20 binding(GO:0042015) |
0.8 | 4.9 | GO:0016936 | galactoside binding(GO:0016936) |
0.7 | 4.9 | GO:0016443 | bidentate ribonuclease III activity(GO:0016443) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 15.5 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.3 | 13.1 | PID ANGIOPOIETIN RECEPTOR PATHWAY | Angiopoietin receptor Tie2-mediated signaling |
0.0 | 6.9 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 5.7 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
0.0 | 4.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 4.4 | PID CERAMIDE PATHWAY | Ceramide signaling pathway |
0.1 | 4.2 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.2 | 4.0 | ST GAQ PATHWAY | G alpha q Pathway |
0.2 | 4.0 | PID THROMBIN PAR1 PATHWAY | PAR1-mediated thrombin signaling events |
0.1 | 3.7 | PID TCR PATHWAY | TCR signaling in naïve CD4+ T cells |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 45.3 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.1 | 6.8 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.5 | 5.9 | REACTOME NFKB ACTIVATION THROUGH FADD RIP1 PATHWAY MEDIATED BY CASPASE 8 AND10 | Genes involved in NF-kB activation through FADD/RIP-1 pathway mediated by caspase-8 and -10 |
0.6 | 5.0 | REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS | Genes involved in Signal regulatory protein (SIRP) family interactions |
0.4 | 4.9 | REACTOME N GLYCAN ANTENNAE ELONGATION | Genes involved in N-Glycan antennae elongation |
0.3 | 4.7 | REACTOME SIGNALING BY FGFR1 FUSION MUTANTS | Genes involved in Signaling by FGFR1 fusion mutants |
0.2 | 4.4 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.1 | 4.3 | REACTOME NUCLEAR SIGNALING BY ERBB4 | Genes involved in Nuclear signaling by ERBB4 |
0.1 | 4.3 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.2 | 4.1 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |