Project
ENCODE: H3K4me1 ChIP-Seq of primary human cells
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Results for CREB3L2

Z-value: 1.06

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Transcription factors associated with CREB3L2

Gene Symbol Gene ID Gene Info
ENSG00000182158.10 cAMP responsive element binding protein 3 like 2

Correlations of motif activity and signal intensity at CREs associated with the motif's TFs:

This plot shows correlation between observed signal intensity of a CRE associated with the transcription factor across all samples and activity of the motif.

For each TF, only the top 5 correlated CREs are shown.

CRE Gene Distance Association probability Pearson corr. coef. P-value Plot
chr7_137668727_137668878CREB3L2179910.1833520.781.3e-02Click!
chr7_137663575_137663726CREB3L2231430.1720340.771.5e-02Click!
chr7_137573299_137573450CREB3L2396410.1534790.771.6e-02Click!
chr7_137605978_137606391CREB3L268310.230519-0.771.6e-02Click!
chr7_137621255_137621573CREB3L227780.2923250.742.2e-02Click!

Activity of the CREB3L2 motif across conditions

Conditions sorted by the z-value of the CREB3L2 motif activity

Move your cursor over a bar to see sample name and corresponding Z-value.

Top target CREs of the motif:

Cis Regulatory Element (CRE) Target Score Top associated gene Gene Info Distance of CRE to TSS CRE/Gene association probability
chr6_16681395_16681795 0.77 RP1-151F17.1

79774
0.1
chr17_48718114_48718630 0.54 ABCC3
ATP-binding cassette, sub-family C (CFTR/MRP), member 3
6154
0.13
chr14_100906069_100906661 0.52 RP11-362L22.1

33123
0.1
chr15_68683192_68683351 0.49 ITGA11
integrin, alpha 11
41221
0.18
chr6_147235336_147235538 0.49 STXBP5-AS1
STXBP5 antisense RNA 1
1584
0.55
chr16_29167036_29167187 0.49 CTB-134H23.3

48345
0.11
chr8_126187977_126188128 0.49 NSMCE2
non-SMC element 2, MMS21 homolog (S. cerevisiae)
51666
0.14
chr4_129308818_129308969 0.46 PGRMC2
progesterone receptor membrane component 2
98909
0.09
chr9_137394449_137394849 0.44 RXRA
retinoid X receptor, alpha
96221
0.07
chr18_53398894_53399045 0.44 TCF4
transcription factor 4
66951
0.14
chr2_223574012_223574225 0.44 ENSG00000238852
.
11399
0.21
chr14_91281521_91281794 0.44 TTC7B
tetratricopeptide repeat domain 7B
1104
0.63
chr1_209831123_209831274 0.43 LAMB3
laminin, beta 3
5387
0.15
chr5_118733387_118734036 0.42 TNFAIP8
tumor necrosis factor, alpha-induced protein 8
41981
0.13
chr10_1290240_1290555 0.42 ADARB2
adenosine deaminase, RNA-specific, B2 (non-functional)
44072
0.17
chr5_71475626_71475777 0.42 MAP1B
microtubule-associated protein 1B
246
0.94
chr21_35709927_35710173 0.41 KCNE2
potassium voltage-gated channel, Isk-related family, member 2
26273
0.13
chr7_141615794_141616062 0.40 OR9A4
olfactory receptor, family 9, subfamily A, member 4
2689
0.16
chr2_71682494_71682648 0.40 DYSF
dysferlin
1719
0.44
chr4_120986498_120987561 0.39 RP11-679C8.2

1084
0.42
chr22_42765026_42765177 0.38 TCF20
transcription factor 20 (AR1)
25479
0.18
chr9_94660876_94661276 0.38 ROR2
receptor tyrosine kinase-like orphan receptor 2
50086
0.18
chr21_30754344_30754495 0.38 ENSG00000239171
.
7391
0.18
chr6_42283087_42283238 0.38 ENSG00000221252
.
96972
0.06
chr10_79638365_79638516 0.38 AL391421.1
Uncharacterized protein; cDNA FLJ43696 fis, clone TBAES2007964
11807
0.18
chr3_139020939_139021090 0.38 MRPS22
mitochondrial ribosomal protein S22
41847
0.13
chr1_201237669_201237867 0.38 PKP1
plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)
14812
0.18
chr1_145526041_145526192 0.37 ITGA10
integrin, alpha 10
1081
0.31
chr1_8882630_8882823 0.37 RERE
arginine-glutamic acid dipeptide (RE) repeats
5024
0.19
chr16_11295208_11295453 0.37 RMI2
RecQ mediated genome instability 2
48176
0.08
chr15_77713627_77714545 0.37 HMG20A
high mobility group 20A
733
0.64
chr5_134773694_134773956 0.36 C5orf20
chromosome 5 open reading frame 20
9213
0.14
chr11_67896240_67896572 0.36 CTD-2655K5.1

859
0.55
chr3_29376763_29376914 0.36 ENSG00000216169
.
34074
0.18
chr18_22878825_22879093 0.36 CTD-2006O16.2

3131
0.37
chr6_52379346_52379497 0.36 TRAM2
translocation associated membrane protein 2
62292
0.12
chr15_35598915_35599148 0.36 ENSG00000265102
.
65534
0.14
chr2_112763039_112763349 0.35 MERTK
c-mer proto-oncogene tyrosine kinase
13796
0.22
chr20_25208276_25208481 0.35 AL035252.1
HCG2018895; Uncharacterized protein
1008
0.49
chr1_33849901_33850220 0.35 PHC2
polyhomeotic homolog 2 (Drosophila)
8866
0.16
chr1_59602387_59602647 0.35 FGGY
FGGY carbohydrate kinase domain containing
159793
0.04
chr6_145569007_145569263 0.34 ENSG00000221796
.
100759
0.09
chr10_134330476_134330668 0.34 LINC01165
long intergenic non-protein coding RNA 1165
5381
0.22
chr1_41467777_41468071 0.34 CTPS1
CTP synthase 1
19091
0.19
chr21_39660692_39660843 0.33 KCNJ15
potassium inwardly-rectifying channel, subfamily J, member 15
7712
0.29
chr16_72405306_72405606 0.33 ENSG00000207514
.
5147
0.31
chr12_48147567_48147718 0.33 SLC48A1
solute carrier family 48 (heme transporter), member 1
57
0.96
chr16_55530572_55531230 0.33 MMP2
matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)
8327
0.22
chr6_13397775_13398015 0.33 GFOD1
glucose-fructose oxidoreductase domain containing 1
10474
0.21
chr14_61789232_61789447 0.33 PRKCH
protein kinase C, eta
43
0.71
chr15_90325381_90325563 0.32 MESP2
mesoderm posterior 2 homolog (mouse)
5883
0.14
chr6_82575347_82575498 0.32 ENSG00000206886
.
101681
0.07
chr4_57945352_57945503 0.32 ENSG00000238541
.
27084
0.14
chr18_56658261_56658433 0.32 ENSG00000251870
.
64819
0.11
chr1_107480050_107480201 0.32 PRMT6
protein arginine methyltransferase 6
119142
0.07
chr1_37920990_37921188 0.32 LINC01137
long intergenic non-protein coding RNA 1137
18923
0.15
chr2_112375416_112375598 0.31 ENSG00000266063
.
153204
0.04
chr12_124870235_124870636 0.31 NCOR2
nuclear receptor corepressor 2
2935
0.37
chr10_115821373_115821605 0.31 ADRB1
adrenoceptor beta 1
17683
0.2
chr1_33798502_33798653 0.31 ENSG00000266239
.
484
0.7
chr10_79291591_79291742 0.31 ENSG00000199592
.
55141
0.15
chr5_159698543_159698722 0.31 ENSG00000243654
.
20163
0.16
chr16_85424724_85424875 0.31 RP11-680G10.1
Uncharacterized protein
33730
0.18
chr3_122785668_122785819 0.31 PDIA5
protein disulfide isomerase family A, member 5
174
0.96
chr9_124051158_124051423 0.31 GSN
gelsolin
2420
0.21
chr10_102124571_102124984 0.31 SCD
stearoyl-CoA desaturase (delta-9-desaturase)
17896
0.13
chr9_6973383_6973534 0.30 KDM4C
lysine (K)-specific demethylase 4C
40330
0.2
chr11_69402239_69402390 0.30 CCND1
cyclin D1
53541
0.14
chr7_47616572_47616723 0.30 TNS3
tensin 3
4582
0.32
chr6_7921829_7921980 0.30 TXNDC5
thioredoxin domain containing 5 (endoplasmic reticulum)
10857
0.3
chr1_234688974_234689202 0.30 ENSG00000212144
.
39933
0.14
chr7_1595634_1595900 0.30 TMEM184A
transmembrane protein 184A
11
0.97
chr20_5844973_5845124 0.30 ENSG00000202380
.
25653
0.17
chr1_45793013_45793296 0.30 HPDL
4-hydroxyphenylpyruvate dioxygenase-like
609
0.67
chr13_20764967_20765118 0.30 GJB2
gap junction protein, beta 2, 26kDa
1123
0.49
chr17_75307827_75307996 0.29 SEPT9
septin 9
7686
0.23
chr1_15105044_15105255 0.29 KAZN
kazrin, periplakin interacting protein
145477
0.05
chr19_18959817_18960274 0.29 UPF1
UPF1 regulator of nonsense transcripts homolog (yeast)
17235
0.11
chr2_151337576_151337727 0.29 RND3
Rho family GTPase 3
4245
0.38
chr16_700261_700412 0.29 WDR90
WD repeat domain 90
919
0.22
chr17_75346852_75347029 0.29 SEPT9
septin 9
22332
0.16
chr1_27916174_27916325 0.29 AHDC1
AT hook, DNA binding motif, containing 1
13853
0.15
chr9_127030805_127030956 0.29 RP11-121A14.3

5725
0.18
chr4_69331756_69331907 0.29 TMPRSS11E
transmembrane protease, serine 11E
18664
0.25
chr8_18696899_18697278 0.29 PSD3
pleckstrin and Sec7 domain containing 3
14796
0.23
chr1_25040508_25040659 0.29 CLIC4
chloride intracellular channel 4
31265
0.15
chr12_14413818_14414239 0.29 ENSG00000251908
.
10753
0.22
chr21_40144936_40145370 0.29 ETS2
v-ets avian erythroblastosis virus E26 oncogene homolog 2
32078
0.22
chr20_30195413_30195568 0.29 ENSG00000264395
.
501
0.67
chr22_37958323_37958474 0.29 CDC42EP1
CDC42 effector protein (Rho GTPase binding) 1
1263
0.33
chr11_57282126_57282281 0.28 SLC43A1
solute carrier family 43 (amino acid system L transporter), member 1
115
0.93
chr5_114795818_114795969 0.28 FEM1C
fem-1 homolog c (C. elegans)
84698
0.08
chr13_98953540_98953691 0.28 FARP1
FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
30397
0.16
chr16_3900112_3900331 0.28 CREBBP
CREB binding protein
29900
0.18
chr9_91390340_91390723 0.28 ENSG00000265873
.
29711
0.24
chr10_77471952_77472136 0.28 RP11-367B6.2

30454
0.19
chr1_9127158_9127594 0.28 SLC2A5
solute carrier family 2 (facilitated glucose/fructose transporter), member 5
2228
0.26
chr8_23396820_23397037 0.28 SLC25A37
solute carrier family 25 (mitochondrial iron transporter), member 37
10355
0.16
chr17_35534355_35534506 0.28 ACACA
acetyl-CoA carboxylase alpha
10804
0.24
chr5_14153391_14153542 0.28 TRIO
trio Rho guanine nucleotide exchange factor
9637
0.32
chr16_57411779_57412024 0.28 CX3CL1
chemokine (C-X3-C motif) ligand 1
1017
0.45
chr7_101688884_101689543 0.28 CTA-357J21.1

12910
0.24
chr9_138818669_138818820 0.28 RP11-432J22.2

19086
0.17
chr19_35939108_35939372 0.28 FFAR2
free fatty acid receptor 2
37
0.96
chr6_83075536_83075687 0.27 TPBG
trophoblast glycoprotein
1650
0.53
chr1_62070273_62070424 0.27 ENSG00000264551
.
24355
0.25
chrX_52964621_52965041 0.27 FAM156A
family with sequence similarity 156, member A
20698
0.18
chr9_109622867_109623098 0.27 ZNF462
zinc finger protein 462
2396
0.34
chr18_59658543_59658754 0.27 RNF152
ring finger protein 152
97184
0.08
chr17_76127130_76127305 0.27 TMC8
transmembrane channel-like 8
348
0.54
chr10_81160624_81160775 0.27 RP11-342M3.5

18615
0.19
chr13_50772718_50772869 0.27 DLEU1
deleted in lymphocytic leukemia 1 (non-protein coding)
116486
0.05
chr6_170501787_170501938 0.27 RP11-302L19.1

24121
0.21
chr6_26296598_26296749 0.27 HIST1H4H
histone cluster 1, H4h
10911
0.08
chr22_43411349_43411733 0.26 PACSIN2
protein kinase C and casein kinase substrate in neurons 2
390
0.86
chr15_70147676_70147827 0.26 ENSG00000215958
.
69908
0.12
chr17_73937351_73937691 0.26 FBF1
Fas (TNFRSF6) binding factor 1
402
0.69
chr16_839632_839783 0.26 CHTF18
CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)
394
0.62
chr9_137366473_137366866 0.26 RXRA
retinoid X receptor, alpha
68241
0.11
chr14_56617754_56618009 0.26 PELI2
pellino E3 ubiquitin protein ligase family member 2
32054
0.21
chr14_77773813_77773964 0.26 POMT2
protein-O-mannosyltransferase 2
12795
0.12
chr8_122360906_122361134 0.26 ENSG00000221644
.
161888
0.04
chr9_137250637_137250831 0.26 ENSG00000263897
.
20523
0.22
chr15_82180102_82180253 0.26 ENSG00000222521
.
156458
0.04
chr10_119303115_119303318 0.26 EMX2
empty spiracles homeobox 2
707
0.63
chr6_151244201_151244352 0.25 ENSG00000202119
.
16082
0.21
chr1_199403544_199403695 0.25 ENSG00000263805
.
180789
0.03
chr19_50804315_50804466 0.25 CTB-191K22.5

9406
0.12
chr5_74867541_74867832 0.25 POLK
polymerase (DNA directed) kappa
24838
0.14
chr8_142143433_142143584 0.25 RP11-809O17.1

3448
0.24
chr6_143388789_143389162 0.25 AIG1
androgen-induced 1
6937
0.19
chr14_104018069_104018220 0.25 ENSG00000252469
.
1462
0.17
chr19_5038576_5038872 0.25 KDM4B
lysine (K)-specific demethylase 4B
22388
0.2
chr6_15090109_15090260 0.25 ENSG00000242989
.
23015
0.23
chr11_126455523_126455674 0.25 KIRREL3-AS1
KIRREL3 antisense RNA 1
41756
0.17
chr14_75687131_75687282 0.25 ENSG00000252013
.
18334
0.14
chr3_142840553_142840704 0.25 CHST2
carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2
2455
0.34
chr17_72837180_72837562 0.25 GRIN2C
glutamate receptor, ionotropic, N-methyl D-aspartate 2C
18627
0.11
chr15_63526608_63526933 0.25 APH1B
APH1B gamma secretase subunit
41447
0.14
chr8_56851680_56851967 0.24 LYN
v-yes-1 Yamaguchi sarcoma viral related oncogene homolog
970
0.5
chr20_33301034_33301185 0.24 TP53INP2
tumor protein p53 inducible nuclear protein 2
8570
0.21
chr15_43545776_43545927 0.24 ENSG00000202211
.
5973
0.13
chr7_121170101_121170252 0.24 ENSG00000221690
.
44632
0.19
chr1_86035839_86035990 0.24 DDAH1
dimethylarginine dimethylaminohydrolase 1
8019
0.19
chr22_46501298_46501449 0.24 ENSG00000198986
.
7256
0.1
chr17_1459503_1459654 0.24 PITPNA
phosphatidylinositol transfer protein, alpha
3212
0.17
chr1_60598722_60598873 0.24 C1orf87
chromosome 1 open reading frame 87
59355
0.16
chr3_58037044_58037226 0.24 FLNB
filamin B, beta
26921
0.22
chr7_372645_372959 0.24 AC187652.1
Protein LOC100996433
69884
0.12
chr1_156680056_156680253 0.24 RP11-66D17.5

2812
0.13
chr5_1515989_1516747 0.24 LPCAT1
lysophosphatidylcholine acyltransferase 1
7724
0.23
chr1_235104740_235105149 0.24 ENSG00000239690
.
65011
0.12
chr19_7897788_7897939 0.24 EVI5L
ecotropic viral integration site 5-like
2744
0.16
chr12_46782989_46783140 0.24 SLC38A2
solute carrier family 38, member 2
16414
0.23
chr11_72295622_72295773 0.24 RP11-169D4.2

81
0.64
chr13_110417364_110417521 0.24 IRS2
insulin receptor substrate 2
21473
0.23
chr14_78266699_78267170 0.24 ADCK1
aarF domain containing kinase 1
452
0.79
chr18_60118168_60118548 0.24 ZCCHC2
zinc finger, CCHC domain containing 2
71882
0.1
chr19_632822_632973 0.23 POLRMT
polymerase (RNA) mitochondrial (DNA directed)
700
0.47
chr17_29896770_29896921 0.23 AC003101.1
Uncharacterized protein
1316
0.29
chr3_71591005_71591175 0.23 ENSG00000221264
.
150
0.95
chr4_5748628_5748779 0.23 EVC
Ellis van Creveld syndrome
35761
0.18
chr1_246599104_246599255 0.23 ENSG00000207326
.
9758
0.22
chr3_178389375_178389526 0.23 KCNMB2
potassium large conductance calcium-activated channel, subfamily M, beta member 2
112832
0.07
chr1_214668072_214668223 0.23 PTPN14
protein tyrosine phosphatase, non-receptor type 14
30001
0.23
chr8_80681240_80681519 0.23 HEY1
hes-related family bHLH transcription factor with YRPW motif 1
1281
0.55
chr19_19488516_19488930 0.23 GATAD2A
GATA zinc finger domain containing 2A
7912
0.14
chr12_109080507_109080751 0.23 CORO1C
coronin, actin binding protein, 1C
9549
0.15
chr13_32059321_32059637 0.23 RXFP2
relaxin/insulin-like family peptide receptor 2
254195
0.02
chr9_90094686_90094877 0.23 DAPK1
death-associated protein kinase 1
17362
0.26
chr6_6916729_6917061 0.23 ENSG00000240936
.
22235
0.26
chr4_106227685_106227836 0.23 ENSG00000243383
.
12945
0.26
chr2_43540601_43540961 0.23 AC010883.5

84069
0.09
chr9_136923442_136923756 0.23 BRD3
bromodomain containing 3
2465
0.24
chr7_14876053_14876204 0.23 DGKB
diacylglycerol kinase, beta 90kDa
4844
0.27
chr17_71301605_71301911 0.23 CDC42EP4
CDC42 effector protein (Rho GTPase binding) 4
5789
0.21
chr4_26220381_26220779 0.23 RBPJ
recombination signal binding protein for immunoglobulin kappa J region
53649
0.18
chr13_36849620_36849771 0.23 ENSG00000207203
.
8390
0.15
chr17_68901911_68902062 0.23 ENSG00000238759
.
392373
0.01
chr7_101705458_101705808 0.22 CTA-357J21.1

29330
0.2
chr7_4832075_4832390 0.22 ENSG00000264474
.
3962
0.18
chr2_48542892_48543532 0.22 FOXN2
forkhead box N2
1363
0.5
chr3_187633047_187633241 0.22 BCL6
B-cell CLL/lymphoma 6
169629
0.03
chr12_50362719_50362903 0.22 AQP6
aquaporin 6, kidney specific
1789
0.21
chr10_31073518_31073669 0.22 RP11-330O11.3

48723
0.15
chr10_17256968_17257119 0.22 VIM-AS1
VIM antisense RNA 1
11854
0.15
chr10_90984522_90984806 0.22 CH25H
cholesterol 25-hydroxylase
17593
0.15
chr1_25198988_25199139 0.22 RUNX3
runt-related transcription factor 3
56549
0.12
chr10_104474502_104474843 0.22 SFXN2
sideroflexin 2
279
0.68
chr17_79481237_79481485 0.22 RP13-766D20.2

288
0.47
chr7_23250461_23250612 0.22 NUPL2
nucleoporin like 2
28853
0.15
chr22_46299735_46299886 0.22 WNT7B
wingless-type MMTV integration site family, member 7B
68785
0.09
chr4_48492543_48492694 0.22 ZAR1
zygote arrest 1
349
0.89
chr5_14305370_14305521 0.22 TRIO
trio Rho guanine nucleotide exchange factor
14359
0.31
chr2_27665478_27665738 0.22 KRTCAP3
keratinocyte associated protein 3
295
0.81
chr12_18535849_18536000 0.22 PIK3C2G
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma
100946
0.09
chr11_67776489_67776640 0.22 ALDH3B1
aldehyde dehydrogenase 3 family, member B1
516
0.66
chr8_54117831_54118132 0.22 RP11-162D9.3

27834
0.21
chr17_19234995_19235146 0.22 RP11-135L13.4

4370
0.13
chr8_130472580_130472731 0.22 ENSG00000263763
.
23733
0.12

Histogram of CRE-TSS distances for CREs targeted by :

Histogram of

Rank distribution of CRE target scores:

Histogram of target CRE score.

Distribution of target CREs across different genomic regions:

Weighted Piechart of Weighted Piechart of Weighted Piechart of

Network of associatons between targets according to the STRING database.

First level regulatory network of CREB3L2

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0014012 peripheral nervous system axon regeneration(GO:0014012)
0.1 0.2 GO:0046101 hypoxanthine biosynthetic process(GO:0046101)
0.1 0.2 GO:0060528 secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development(GO:0060528)
0.1 0.2 GO:0046185 aldehyde catabolic process(GO:0046185)
0.1 0.2 GO:0021542 dentate gyrus development(GO:0021542)
0.0 0.2 GO:0032430 positive regulation of phospholipase A2 activity(GO:0032430)
0.0 0.1 GO:1903504 positive regulation of spindle checkpoint(GO:0090232) regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090266) positive regulation of mitotic cell cycle spindle assembly checkpoint(GO:0090267) positive regulation of cell cycle checkpoint(GO:1901978) regulation of mitotic spindle checkpoint(GO:1903504)
0.0 0.1 GO:0071692 sequestering of extracellular ligand from receptor(GO:0035581) sequestering of TGFbeta in extracellular matrix(GO:0035583) protein localization to extracellular region(GO:0071692) maintenance of protein location in extracellular region(GO:0071694) extracellular regulation of signal transduction(GO:1900115) extracellular negative regulation of signal transduction(GO:1900116)
0.0 0.2 GO:0006561 proline biosynthetic process(GO:0006561)
0.0 0.2 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.0 0.1 GO:0001821 histamine secretion(GO:0001821)
0.0 0.2 GO:0045662 negative regulation of myoblast differentiation(GO:0045662)
0.0 0.1 GO:0045085 negative regulation of interleukin-2 biosynthetic process(GO:0045085)
0.0 0.1 GO:0045112 integrin biosynthetic process(GO:0045112)
0.0 0.1 GO:0001996 positive regulation of heart rate by epinephrine-norepinephrine(GO:0001996)
0.0 0.1 GO:0043985 histone H4-R3 methylation(GO:0043985)
0.0 0.1 GO:0032516 positive regulation of phosphoprotein phosphatase activity(GO:0032516)
0.0 0.2 GO:0042416 dopamine biosynthetic process(GO:0042416)
0.0 0.2 GO:0031274 pseudopodium assembly(GO:0031269) regulation of pseudopodium assembly(GO:0031272) positive regulation of pseudopodium assembly(GO:0031274)
0.0 0.2 GO:0060710 chorio-allantoic fusion(GO:0060710)
0.0 0.2 GO:0035020 regulation of Rac protein signal transduction(GO:0035020)
0.0 0.1 GO:0009756 carbohydrate mediated signaling(GO:0009756)
0.0 0.2 GO:0016264 gap junction assembly(GO:0016264)
0.0 0.1 GO:0007028 cytoplasm organization(GO:0007028)
0.0 0.0 GO:0007221 positive regulation of transcription of Notch receptor target(GO:0007221)
0.0 0.1 GO:0032926 negative regulation of activin receptor signaling pathway(GO:0032926)
0.0 0.5 GO:0018904 glycerol ether metabolic process(GO:0006662) ether metabolic process(GO:0018904)
0.0 0.1 GO:0030538 embryonic genitalia morphogenesis(GO:0030538)
0.0 0.1 GO:0006391 transcription initiation from mitochondrial promoter(GO:0006391)
0.0 0.0 GO:0000101 sulfur amino acid transport(GO:0000101) L-cystine transport(GO:0015811)
0.0 0.1 GO:0032914 positive regulation of transforming growth factor beta1 production(GO:0032914)
0.0 0.1 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.0 0.1 GO:0032906 transforming growth factor beta2 production(GO:0032906) regulation of transforming growth factor beta2 production(GO:0032909)
0.0 0.0 GO:0010193 response to ozone(GO:0010193)
0.0 0.1 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567) DNA replication, removal of RNA primer(GO:0043137)
0.0 0.1 GO:0032959 inositol trisphosphate biosynthetic process(GO:0032959)
0.0 0.2 GO:0007567 parturition(GO:0007567)
0.0 0.1 GO:0048311 mitochondrion distribution(GO:0048311)
0.0 0.2 GO:0019369 arachidonic acid metabolic process(GO:0019369)
0.0 0.1 GO:0043569 negative regulation of insulin-like growth factor receptor signaling pathway(GO:0043569)
0.0 0.1 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 0.1 GO:0006663 platelet activating factor biosynthetic process(GO:0006663)
0.0 0.1 GO:0002604 dendritic cell antigen processing and presentation(GO:0002468) regulation of dendritic cell antigen processing and presentation(GO:0002604) positive regulation of dendritic cell antigen processing and presentation(GO:0002606)
0.0 0.1 GO:0070366 regulation of hepatocyte differentiation(GO:0070366)
0.0 0.1 GO:0045198 establishment of epithelial cell apical/basal polarity(GO:0045198)
0.0 0.1 GO:0000089 mitotic metaphase(GO:0000089)
0.0 0.1 GO:0002903 negative regulation of B cell apoptotic process(GO:0002903)
0.0 0.1 GO:0048170 positive regulation of long-term neuronal synaptic plasticity(GO:0048170)
0.0 0.1 GO:0007217 tachykinin receptor signaling pathway(GO:0007217)
0.0 0.1 GO:0030259 lipid glycosylation(GO:0030259)
0.0 0.1 GO:0021932 hindbrain radial glia guided cell migration(GO:0021932)
0.0 0.1 GO:0040016 embryonic cleavage(GO:0040016)
0.0 0.1 GO:0051014 actin filament severing(GO:0051014)
0.0 0.1 GO:0007185 transmembrane receptor protein tyrosine phosphatase signaling pathway(GO:0007185)
0.0 0.1 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.0 0.0 GO:0071072 negative regulation of phospholipid biosynthetic process(GO:0071072)
0.0 0.0 GO:0060665 regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling(GO:0060665)
0.0 0.0 GO:0031657 regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle(GO:0031657) positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle(GO:0031659)
0.0 0.0 GO:0055089 fatty acid homeostasis(GO:0055089)
0.0 0.0 GO:0070874 negative regulation of glycogen metabolic process(GO:0070874)
0.0 0.1 GO:0007090 obsolete regulation of S phase of mitotic cell cycle(GO:0007090)
0.0 0.0 GO:0071379 cellular response to prostaglandin stimulus(GO:0071379)
0.0 0.0 GO:0072367 regulation of lipid transport by regulation of transcription from RNA polymerase II promoter(GO:0072367)
0.0 0.0 GO:0015917 aminophospholipid transport(GO:0015917)
0.0 0.0 GO:0010989 regulation of low-density lipoprotein particle clearance(GO:0010988) negative regulation of low-density lipoprotein particle clearance(GO:0010989)
0.0 0.1 GO:0051496 positive regulation of stress fiber assembly(GO:0051496)
0.0 0.1 GO:0019987 obsolete negative regulation of anti-apoptosis(GO:0019987)
0.0 0.1 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.0 0.0 GO:0048003 antigen processing and presentation of lipid antigen via MHC class Ib(GO:0048003)
0.0 0.1 GO:0043567 regulation of insulin-like growth factor receptor signaling pathway(GO:0043567)
0.0 0.0 GO:0070141 response to UV-A(GO:0070141)
0.0 0.2 GO:0045806 negative regulation of endocytosis(GO:0045806)
0.0 0.1 GO:0007386 compartment pattern specification(GO:0007386)
0.0 0.0 GO:0060014 granulosa cell differentiation(GO:0060014)
0.0 0.0 GO:0014832 urinary bladder smooth muscle contraction(GO:0014832)
0.0 0.0 GO:0060059 embryonic retina morphogenesis in camera-type eye(GO:0060059)
0.0 0.0 GO:0070427 nucleotide-binding oligomerization domain containing 1 signaling pathway(GO:0070427)
0.0 0.1 GO:0060259 regulation of feeding behavior(GO:0060259)
0.0 0.0 GO:0070365 hepatocyte differentiation(GO:0070365)
0.0 0.1 GO:0008354 germ cell migration(GO:0008354)
0.0 0.0 GO:0015824 proline transport(GO:0015824)
0.0 0.1 GO:0072501 cellular phosphate ion homeostasis(GO:0030643) cellular divalent inorganic anion homeostasis(GO:0072501) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.0 0.0 GO:0019695 choline metabolic process(GO:0019695)
0.0 0.0 GO:0071800 podosome assembly(GO:0071800)
0.0 0.1 GO:2000144 positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.0 0.0 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.0 0.0 GO:0001661 conditioned taste aversion(GO:0001661)
0.0 0.0 GO:0043578 nuclear matrix organization(GO:0043578) nuclear matrix anchoring at nuclear membrane(GO:0090292)
0.0 0.0 GO:0090281 negative regulation of calcium ion import(GO:0090281)
0.0 0.3 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.1 GO:0048745 smooth muscle tissue development(GO:0048745)
0.0 0.0 GO:0043129 surfactant homeostasis(GO:0043129) chemical homeostasis within a tissue(GO:0048875)
0.0 0.1 GO:2000272 negative regulation of receptor activity(GO:2000272)
0.0 0.0 GO:0010984 regulation of lipoprotein particle clearance(GO:0010984)
0.0 0.0 GO:0009191 nucleoside diphosphate catabolic process(GO:0009134) ribonucleoside diphosphate catabolic process(GO:0009191)
0.0 0.1 GO:0050812 acetyl-CoA biosynthetic process from pyruvate(GO:0006086) regulation of acetyl-CoA biosynthetic process from pyruvate(GO:0010510) regulation of acyl-CoA biosynthetic process(GO:0050812)
0.0 0.0 GO:0043589 skin morphogenesis(GO:0043589)
0.0 0.0 GO:0060743 epithelial cell maturation involved in prostate gland development(GO:0060743)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0042272 nuclear RNA export factor complex(GO:0042272)
0.0 0.1 GO:0030061 mitochondrial crista(GO:0030061)
0.0 0.1 GO:0032444 activin responsive factor complex(GO:0032444)
0.0 0.1 GO:1903561 extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 0.1 GO:0070695 FHF complex(GO:0070695)
0.0 0.1 GO:0031262 Ndc80 complex(GO:0031262)
0.0 0.1 GO:0005588 collagen type V trimer(GO:0005588)
0.0 0.1 GO:0042825 TAP complex(GO:0042825)
0.0 0.1 GO:0042719 mitochondrial intermembrane space protein transporter complex(GO:0042719)
0.0 0.1 GO:0016327 apicolateral plasma membrane(GO:0016327)
0.0 0.1 GO:0071546 pi-body(GO:0071546)
0.0 0.2 GO:0031463 Cul3-RING ubiquitin ligase complex(GO:0031463)
0.0 0.0 GO:0070188 obsolete Stn1-Ten1 complex(GO:0070188)
0.0 0.0 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.0 0.0 GO:0030904 retromer complex(GO:0030904)
0.0 0.1 GO:0030897 HOPS complex(GO:0030897)
0.0 0.1 GO:0002102 podosome(GO:0002102)
0.0 0.2 GO:0000421 autophagosome membrane(GO:0000421)
0.0 0.5 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 0.1 GO:0031941 filamentous actin(GO:0031941)
0.0 0.0 GO:0032059 bleb(GO:0032059)
0.0 0.0 GO:0070022 transforming growth factor beta receptor homodimeric complex(GO:0070022)
0.0 0.1 GO:0043202 lysosomal lumen(GO:0043202)
0.0 0.3 GO:0043204 perikaryon(GO:0043204)
0.0 0.1 GO:0030877 beta-catenin destruction complex(GO:0030877)
0.0 0.1 GO:0016328 lateral plasma membrane(GO:0016328)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.1 0.2 GO:0004886 9-cis retinoic acid receptor activity(GO:0004886)
0.0 0.1 GO:0044020 histone methyltransferase activity (H4-R3 specific)(GO:0044020)
0.0 0.2 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.1 GO:0004995 tachykinin receptor activity(GO:0004995)
0.0 0.1 GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity(GO:0004030)
0.0 0.1 GO:0016215 stearoyl-CoA 9-desaturase activity(GO:0004768) acyl-CoA desaturase activity(GO:0016215)
0.0 0.1 GO:0031995 insulin-like growth factor II binding(GO:0031995)
0.0 0.1 GO:0050220 prostaglandin-E synthase activity(GO:0050220)
0.0 0.2 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.0 0.2 GO:0005087 Ran guanyl-nucleotide exchange factor activity(GO:0005087)
0.0 0.1 GO:0052659 inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659)
0.0 0.1 GO:0019211 phosphatase activator activity(GO:0019211)
0.0 0.1 GO:0019215 intermediate filament binding(GO:0019215)
0.0 0.1 GO:0050815 phosphoserine binding(GO:0050815)
0.0 0.1 GO:0005534 galactose binding(GO:0005534)
0.0 0.1 GO:0005006 epidermal growth factor-activated receptor activity(GO:0005006)
0.0 0.1 GO:0004939 beta-adrenergic receptor activity(GO:0004939)
0.0 0.1 GO:0015279 store-operated calcium channel activity(GO:0015279)
0.0 0.1 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.1 GO:0004687 myosin light chain kinase activity(GO:0004687)
0.0 0.1 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.0 0.1 GO:0046980 tapasin binding(GO:0046980)
0.0 0.2 GO:0005112 Notch binding(GO:0005112)
0.0 0.1 GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity(GO:0047184)
0.0 0.1 GO:0000987 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978) core promoter proximal region sequence-specific DNA binding(GO:0000987) core promoter proximal region DNA binding(GO:0001159)
0.0 0.2 GO:0008508 bile acid:sodium symporter activity(GO:0008508)
0.0 0.1 GO:0008900 hydrogen:potassium-exchanging ATPase activity(GO:0008900)
0.0 0.3 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.1 GO:0050811 GABA receptor binding(GO:0050811)
0.0 0.2 GO:0030544 Hsp70 protein binding(GO:0030544)
0.0 0.1 GO:0017166 vinculin binding(GO:0017166)
0.0 0.1 GO:0019238 cyclohydrolase activity(GO:0019238)
0.0 0.0 GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water(GO:0016717)
0.0 0.1 GO:0035005 1-phosphatidylinositol-4-phosphate 3-kinase activity(GO:0035005)
0.0 0.1 GO:0050682 AF-2 domain binding(GO:0050682)
0.0 0.1 GO:0051864 histone demethylase activity (H3-K36 specific)(GO:0051864)
0.0 0.1 GO:0031177 phosphopantetheine binding(GO:0031177)
0.0 0.1 GO:0050501 hyaluronan synthase activity(GO:0050501)
0.0 0.0 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.0 0.1 GO:0070273 phosphatidylinositol-4-phosphate binding(GO:0070273)
0.0 0.1 GO:0001595 angiotensin receptor activity(GO:0001595) angiotensin type II receptor activity(GO:0004945)
0.0 0.1 GO:0043208 glycosphingolipid binding(GO:0043208)
0.0 0.1 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 0.1 GO:0004982 N-formyl peptide receptor activity(GO:0004982)
0.0 0.0 GO:0005275 amine transmembrane transporter activity(GO:0005275)
0.0 0.1 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.0 0.1 GO:0003747 translation release factor activity(GO:0003747) translation termination factor activity(GO:0008079)
0.0 0.1 GO:0032052 bile acid binding(GO:0032052)
0.0 0.1 GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor(GO:0016901)
0.0 0.1 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.0 0.1 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.0 0.0 GO:0032450 maltose alpha-glucosidase activity(GO:0032450)
0.0 0.1 GO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity(GO:0001517)
0.0 0.2 GO:0001968 fibronectin binding(GO:0001968)
0.0 0.0 GO:0031127 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.1 GO:0000900 translation repressor activity, nucleic acid binding(GO:0000900)
0.0 0.1 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.1 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 0.1 GO:0000293 ferric-chelate reductase activity(GO:0000293)
0.0 0.1 GO:0048406 nerve growth factor binding(GO:0048406)
0.0 0.1 GO:0001515 opioid peptide activity(GO:0001515)
0.0 0.1 GO:0051861 glycolipid binding(GO:0051861)
0.0 0.0 GO:0016728 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.0 0.1 GO:0009008 DNA-methyltransferase activity(GO:0009008)
0.0 0.1 GO:0003846 2-acylglycerol O-acyltransferase activity(GO:0003846)
0.0 0.1 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624) ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.0 0.0 GO:0008607 phosphorylase kinase regulator activity(GO:0008607)
0.0 0.1 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 0.0 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.0 GO:0008332 low voltage-gated calcium channel activity(GO:0008332)
0.0 0.1 GO:0048407 platelet-derived growth factor binding(GO:0048407)
0.0 0.1 GO:0008266 poly(U) RNA binding(GO:0008266)
0.0 0.1 GO:0042834 peptidoglycan binding(GO:0042834)
0.0 0.0 GO:0033265 choline binding(GO:0033265)
0.0 0.0 GO:0045545 syndecan binding(GO:0045545)
0.0 0.0 GO:0016312 inositol bisphosphate phosphatase activity(GO:0016312)
0.0 0.0 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.0 GO:0004735 pyrroline-5-carboxylate reductase activity(GO:0004735)
0.0 0.1 GO:0015125 bile acid transmembrane transporter activity(GO:0015125)
0.0 0.2 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.0 0.0 GO:0042285 UDP-xylosyltransferase activity(GO:0035252) xylosyltransferase activity(GO:0042285)
0.0 0.0 GO:0070579 methylcytosine dioxygenase activity(GO:0070579)
0.0 0.1 GO:0019894 kinesin binding(GO:0019894)
0.0 0.1 GO:0003810 protein-glutamine gamma-glutamyltransferase activity(GO:0003810)
0.0 0.0 GO:0030911 TPR domain binding(GO:0030911)
0.0 0.1 GO:0051635 obsolete bacterial cell surface binding(GO:0051635)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.1 PID PI3K PLC TRK PATHWAY Trk receptor signaling mediated by PI3K and PLC-gamma
0.0 0.3 PID IL5 PATHWAY IL5-mediated signaling events
0.0 0.5 PID NETRIN PATHWAY Netrin-mediated signaling events
0.0 0.4 PID RXR VDR PATHWAY RXR and RAR heterodimerization with other nuclear receptor

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.1 REACTOME SIGNALING BY ERBB2 Genes involved in Signaling by ERBB2
0.0 0.0 REACTOME ACYL CHAIN REMODELLING OF PI Genes involved in Acyl chain remodelling of PI
0.0 0.1 REACTOME SYNTHESIS OF PIPS AT THE EARLY ENDOSOME MEMBRANE Genes involved in Synthesis of PIPs at the early endosome membrane
0.0 0.0 REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE Genes involved in Regulation of Insulin Secretion by Acetylcholine
0.0 0.2 REACTOME ROLE OF SECOND MESSENGERS IN NETRIN1 SIGNALING Genes involved in Role of second messengers in netrin-1 signaling
0.0 0.2 REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis
0.0 0.2 REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs)
0.0 0.0 REACTOME IL 7 SIGNALING Genes involved in Interleukin-7 signaling
0.0 0.2 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.0 0.2 REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS Genes involved in Facilitative Na+-independent glucose transporters
0.0 0.1 REACTOME SYNTHESIS OF PIPS AT THE LATE ENDOSOME MEMBRANE Genes involved in Synthesis of PIPs at the late endosome membrane
0.0 0.2 REACTOME RAS ACTIVATION UOPN CA2 INFUX THROUGH NMDA RECEPTOR Genes involved in Ras activation uopn Ca2+ infux through NMDA receptor
0.0 0.3 REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression
0.0 0.3 REACTOME SMOOTH MUSCLE CONTRACTION Genes involved in Smooth Muscle Contraction
0.0 0.1 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.0 0.1 REACTOME ALPHA LINOLENIC ACID ALA METABOLISM Genes involved in alpha-linolenic acid (ALA) metabolism
0.0 0.1 REACTOME TETRAHYDROBIOPTERIN BH4 SYNTHESIS RECYCLING SALVAGE AND REGULATION Genes involved in Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation
0.0 0.1 REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex
0.0 0.1 REACTOME RECYCLING OF BILE ACIDS AND SALTS Genes involved in Recycling of bile acids and salts