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ENCODE: H3K4me1 ChIP-Seq of primary human cells
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CREMA is a free online tool that recognizes most important transcription factors that change the chromatin state across different samples.

Results for HOXB13

Z-value: 0.77

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Transcription factors associated with HOXB13

Gene Symbol Gene ID Gene Info
HOXB13
ENSG00000159184.7 HOXB13

Correlations of motif activity and signal intensity at CREs associated with the motif's TFs:

This plot shows correlation between observed signal intensity of a CRE associated with the transcription factor across all samples and activity of the motif.

For each TF, only the top 5 correlated CREs are shown.

CRE Gene Distance Association probability Pearson corr. coef. P-value Plot
HOXB13chr17_46806332_468064831330.9213490.412.7e-01Click!
HOXB13chr17_46816297_4681644898320.1006850.324.0e-01Click!
HOXB13chr17_46810841_4681100643830.1176010.225.7e-01Click!
HOXB13chr17_46805969_468061204960.6462590.186.5e-01Click!
HOXB13chr17_46811332_4681148348670.1139370.117.7e-01Click!

Activity of the HOXB13 motif across conditions

Conditions sorted by the z-value of the HOXB13 motif activity

Move your cursor over a bar to see sample name and corresponding Z-value.

Top target CREs of the motif:

Cis Regulatory Element (CRE) Target Score Top associated gene Gene Info Distance of CRE to TSS CRE/Gene association probability
chr2_216484078_216484386 0.38 AC012462.1
183256
 0.03
chr20_10600399_10600550 0.33 JAG1
 jagged 1
 42680
 0.18
chr2_135814073_135814224 0.33 RAB3GAP1
 RAB3 GTPase activating protein subunit 1 (catalytic)
 4279
 0.2
chr8_122360906_122361134 0.31 ENSG00000221644
 .
 161888
 0.04
chr6_161527421_161527572 0.28 AGPAT4
 1-acylglycerol-3-phosphate O-acyltransferase 4
 42825
 0.18
chr15_60370131_60370351 0.28 FOXB1
 forkhead box B1
 73820
 0.12
chr12_23131728_23131879 0.28 ETNK1
 ethanolamine kinase 1
 353512
 0.01
chr8_27154876_27155049 0.26 TRIM35
 tripartite motif containing 35
 3310
 0.25
chr11_111990686_111990837 0.24 SDHD
 succinate dehydrogenase complex, subunit D, integral membrane protein
 33138
 0.08
chr8_19069882_19070033 0.24 SH2D4A
 SH2 domain containing 4A
 101171
 0.08
chr16_50236477_50236828 0.23 ADCY7
 adenylate cyclase 7
 43396
 0.12
chr2_148804260_148804811 0.23 ORC4
 origin recognition complex, subunit 4
 25388
 0.19
chr1_198498527_198498869 0.23 ATP6V1G3
 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3
 11106
 0.29
chr3_159173828_159173979 0.22 ENSG00000263634
 .
 173468
 0.03
chr10_101692086_101692460 0.21 DNMBP
 dynamin binding protein
 1520
 0.41
chr5_36879254_36879912 0.21 NIPBL
 Nipped-B homolog (Drosophila)
 2691
 0.41
chr5_86422918_86423069 0.21 ENSG00000265919
 .
 12222
 0.22
chr7_17234854_17235017 0.21 AC003075.4
85992
 0.1
chr2_176030685_176030836 0.21 ENSG00000215973
 .
 1677
 0.22
chr20_36618887_36619038 0.20 ENSG00000199683
 .
 15079
 0.17
chr17_7653466_7653617 0.20 DNAH2
 dynein, axonemal, heavy chain 2
 30502
 0.08
chr15_59598180_59598331 0.20 RP11-429D19.1
34894
 0.11
chr12_25487343_25487617 0.20 ENSG00000201439
 .
 69882
 0.1
chr17_70388485_70388636 0.20 SOX9
 SRY (sex determining region Y)-box 9
 271399
 0.02
chr21_36251212_36251413 0.20 RUNX1
 runt-related transcription factor 1
 8168
 0.31
chr5_38872858_38873009 0.20 OSMR
 oncostatin M receptor
 26832
 0.24
chr19_38700842_38701258 0.20 ENSG00000266428
 .
 10176
 0.1
chr6_10416011_10416162 0.20 TFAP2A
 transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
 337
 0.82
chr7_56130478_56130743 0.20 SUMF2
 sulfatase modifying factor 2
 1085
 0.32
chr17_15941252_15941403 0.20 NCOR1
 nuclear receptor corepressor 1
 1453
 0.3
chr20_10963665_10963956 0.20 RP11-103J8.1
3513
 0.34
chr10_101723594_101723781 0.20 DNMBP
 dynamin binding protein
 32934
 0.15
chr1_199582244_199582395 0.19 ENSG00000263805
 .
 2089
 0.49
chr10_29916759_29916910 0.19 SVIL
 supervillin
 7067
 0.21
chr5_167126219_167126370 0.19 CTB-78F1.2
22074
 0.2
chr22_38244115_38244422 0.19 ENSG00000207696
 .
 487
 0.41
chr5_37841386_37841537 0.19 GDNF
 glial cell derived neurotrophic factor
 1673
 0.47
chr10_72593489_72593705 0.19 SGPL1
 sphingosine-1-phosphate lyase 1
 10657
 0.2
chr7_14020149_14020300 0.19 ETV1
 ets variant 1
 5842
 0.29
chr17_69436901_69437052 0.19 ENSG00000222563
 .
 129667
 0.06
chr21_29020378_29020529 0.19 ADAMTS5
 ADAM metallopeptidase with thrombospondin type 1 motif, 5
 681621
 0.0
chr11_13964368_13964519 0.19 ENSG00000201856
 .
 35306
 0.23
chr2_227625941_227626092 0.18 IRS1
 insulin receptor substrate 1
 38459
 0.16
chr13_49005626_49005777 0.18 LPAR6
 lysophosphatidic acid receptor 6
 4658
 0.32
chr6_33548164_33548316 0.18 BAK1
 BCL2-antagonist/killer 1
 221
 0.9
chr11_67354003_67354154 0.18 GSTP1
 glutathione S-transferase pi 1
 2865
 0.13
chr2_75847358_75847509 0.18 ENSG00000221638
 .
 7646
 0.14
chr1_12678723_12678924 0.18 DHRS3
 dehydrogenase/reductase (SDR family) member 3
 1086
 0.5
chr14_71956022_71956173 0.18 SIPA1L1
 signal-induced proliferation-associated 1 like 1
 39945
 0.17
chr4_151074226_151074377 0.18 ENSG00000238721
 .
 56557
 0.15
chr1_31889861_31890012 0.18 SERINC2
 serine incorporator 2
 3276
 0.21
chr5_77268268_77268488 0.18 AP3B1
 adaptor-related protein complex 3, beta 1 subunit
 66596
 0.12
chr7_7196352_7196827 0.18 C1GALT1
 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
 24
 0.98
chr3_145902395_145902546 0.18 PLOD2
 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
 21030
 0.2
chr2_40079335_40079486 0.18 SLC8A1-AS1
 SLC8A1 antisense RNA 1
 65817
 0.13
chr2_99342877_99343146 0.17 MGAT4A
 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
 148
 0.97
chr9_36194329_36194526 0.17 CLTA
 clathrin, light chain A
 3467
 0.23
chr7_156792904_156793239 0.17 MNX1-AS2
 MNX1 antisense RNA 2
 5930
 0.17
chr1_149816060_149816683 0.17 HIST2H2AA3
 histone cluster 2, H2aa3
 1893
 0.12
chr20_46815691_46815842 0.17 ENSG00000252227
 .
 51000
 0.18
chr22_47212286_47212467 0.17 ENSG00000221672
 .
 31427
 0.17
chr18_53145450_53145601 0.17 ENSG00000264571
 .
 927
 0.57
chrX_24166137_24167088 0.17 ZFX
 zinc finger protein, X-linked
 1134
 0.35
chr5_172328463_172328614 0.17 ERGIC1
 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
 3682
 0.23
chr5_153826475_153827364 0.16 SAP30L
 SAP30-like
 814
 0.51
chr5_179770020_179770171 0.16 GFPT2
 glutamine-fructose-6-phosphate transaminase 2
 9805
 0.21
chr1_43420334_43420485 0.16 SLC2A1
 solute carrier family 2 (facilitated glucose transporter), member 1
 4091
 0.22
chr7_76213485_76213833 0.16 POMZP3
 POM121 and ZP3 fusion
 33958
 0.13
chr3_57958497_57958723 0.16 FLNB
 filamin B, beta
 35517
 0.18
chr14_31641329_31641480 0.16 HECTD1
 HECT domain containing E3 ubiquitin protein ligase 1
 3857
 0.22
chr15_102156555_102156706 0.16 ENSG00000252614
 .
 31885
 0.15
chr2_44798144_44798295 0.16 CAMKMT
 calmodulin-lysine N-methyltransferase
 198338
 0.03
chr12_58781035_58781186 0.16 RP11-362K2.2
 Protein LOC100506869
 156797
 0.04
chr6_110508362_110508550 0.16 CDC40
 cell division cycle 40
 6832
 0.24
chr6_122793405_122793976 0.16 PKIB
 protein kinase (cAMP-dependent, catalytic) inhibitor beta
 614
 0.51
chr17_40949013_40949515 0.15 COA3
 cytochrome c oxidase assembly factor 3
 1458
 0.18
chr2_12618919_12619301 0.15 ENSG00000207183
 .
 67483
 0.14
chr11_33049563_33049714 0.15 TCP11L1
 t-complex 11, testis-specific-like 1
 11325
 0.17
chr12_24753774_24754027 0.15 ENSG00000240481
 .
 105822
 0.08
chr6_140784427_140784578 0.15 ENSG00000221336
 .
 197348
 0.03
chr2_46303608_46303759 0.15 AC017006.2
2284
 0.4
chrY_14665326_14665477 0.15 GYG2P1
 glycogenin 2 pseudogene 1
 133280
 0.05
chr6_38229324_38229475 0.15 ENSG00000200706
 .
 54349
 0.16
chr12_68374810_68375098 0.15 IFNG-AS1
 IFNG antisense RNA 1
 8271
 0.31
chr14_52077289_52077440 0.15 ENSG00000251771
 .
 5746
 0.23
chr3_127454839_127454990 0.15 MGLL
 monoglyceride lipase
 286
 0.93
chr22_38898988_38899381 0.15 DDX17
 DEAD (Asp-Glu-Ala-Asp) box helicase 17
 3133
 0.2
chr12_26899168_26899462 0.15 ITPR2
 inositol 1,4,5-trisphosphate receptor, type 2
 86399
 0.09
chr5_133328742_133328893 0.14 VDAC1
 voltage-dependent anion channel 1
 11509
 0.22
chr4_169691508_169691659 0.14 PALLD
 palladin, cytoskeletal associated protein
 58273
 0.12
chr5_107009300_107009451 0.14 EFNA5
 ephrin-A5
 2779
 0.38
chr5_136483987_136484138 0.14 SPOCK1
 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
 165165
 0.04
chr1_64449955_64450106 0.14 ENSG00000207190
 .
 44642
 0.17
chr6_126362121_126362442 0.14 TRMT11
 tRNA methyltransferase 11 homolog (S. cerevisiae)
 34293
 0.18
chr17_64345059_64345333 0.14 ENSG00000244044
 .
 14951
 0.2
chr4_100368387_100368679 0.14 ADH7
 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
 11639
 0.22
chr6_128833498_128833649 0.14 RP1-86D1.4
7303
 0.17
chr2_105460725_105461021 0.14 LINC01158
 long intergenic non-protein coding RNA 1158
 7038
 0.15
chr16_84766620_84766890 0.14 USP10
 ubiquitin specific peptidase 10
 33109
 0.16
chr5_141707709_141707943 0.14 AC005592.2
2963
 0.28
chr3_65982631_65982782 0.14 ENSG00000202071
 .
 6909
 0.21
chr10_73600697_73600848 0.14 ENSG00000238446
 .
 3779
 0.22
chr5_108992233_108992456 0.14 ENSG00000266090
 .
 28937
 0.18
chr12_79960162_79960313 0.14 PAWR
 PRKC, apoptosis, WT1, regulator
 30077
 0.18
chr5_150160797_150161161 0.14 AC010441.1
3112
 0.19
chr3_59761256_59761407 0.14 NPCDR1
 nasopharyngeal carcinoma, down-regulated 1
 196252
 0.03
chr2_128615982_128616171 0.14 POLR2D
 polymerase (RNA) II (DNA directed) polypeptide D
 345
 0.84
chr5_83222299_83222450 0.14 ENSG00000216125
 .
 47331
 0.18
chr1_174131198_174131349 0.14 RABGAP1L
 RAB GTPase activating protein 1-like
 2545
 0.33
chr3_42861494_42861645 0.14 ACKR2
 atypical chemokine receptor 2
 458
 0.72
chr6_126305019_126305170 0.14 TRMT11
 tRNA methyltransferase 11 homolog (S. cerevisiae)
 2482
 0.26
chr6_80853031_80853182 0.14 BCKDHB
 branched chain keto acid dehydrogenase E1, beta polypeptide
 36723
 0.23
chr18_55853503_55853654 0.14 NEDD4L
 neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
 9044
 0.23
chr9_116641852_116642003 0.14 ZNF618
 zinc finger protein 618
 3297
 0.35
chr4_82390108_82390350 0.13 RASGEF1B
 RasGEF domain family, member 1B
 2161
 0.47
chr12_80950525_80950676 0.13 RP11-272K23.3
36880
 0.19
chr21_39992446_39992744 0.13 ERG
 v-ets avian erythroblastosis virus E26 oncogene homolog
 35726
 0.23
chrX_44730783_44731431 0.13 KDM6A
 lysine (K)-specific demethylase 6A
 1650
 0.39
chr4_123461472_123461766 0.13 IL21-AS1
 IL21 antisense RNA 1
 78519
 0.09
chr18_19971465_19971616 0.13 CTAGE1
 cutaneous T-cell lymphoma-associated antigen 1
 23290
 0.24
chr14_69535729_69536049 0.13 ENSG00000206768
 .
 74781
 0.09
chr6_26049516_26049667 0.13 HIST1H3C
 histone cluster 1, H3c
 3952
 0.08
chr13_51104174_51104472 0.13 ENSG00000221198
 .
 166950
 0.04
chr8_87535059_87535465 0.13 CPNE3
 copine III
 6029
 0.21
chr2_233453893_233454044 0.13 AC073254.1
2564
 0.17
chr13_76867098_76867386 0.13 ENSG00000243274
 .
 158175
 0.04
chr12_106630836_106630987 0.13 RP11-651L5.2
9823
 0.18
chr7_151434053_151434204 0.13 PRKAG2
 protein kinase, AMP-activated, gamma 2 non-catalytic subunit
 728
 0.74
chr11_130036128_130036279 0.13 ST14
 suppression of tumorigenicity 14 (colon carcinoma)
 6746
 0.27
chr17_60074998_60075962 0.13 ENSG00000242398
 .
 7868
 0.17
chr14_103859829_103860122 0.13 MARK3
 MAP/microtubule affinity-regulating kinase 3
 7399
 0.18
chr2_70142925_70143800 0.13 MXD1
 MAX dimerization protein 1
 1042
 0.4
chr6_27833560_27833860 0.13 HIST1H2AL
 histone cluster 1, H2al
 676
 0.39
chr13_74271902_74272053 0.12 KLF12
 Kruppel-like factor 12
 297209
 0.01
chr12_10876643_10876807 0.12 YBX3
 Y box binding protein 3
 814
 0.61
chr1_198143089_198143887 0.12 NEK7
 NIMA-related kinase 7
 17237
 0.29
chr7_123387049_123387200 0.12 WASL
 Wiskott-Aldrich syndrome-like
 1997
 0.27
chr6_14128901_14129195 0.12 CD83
 CD83 molecule
 11176
 0.25
chr2_216529775_216530114 0.12 ENSG00000212055
 .
 213698
 0.02
chr5_83018281_83018896 0.12 HAPLN1
 hyaluronan and proteoglycan link protein 1
 1156
 0.52
chr6_43894280_43894431 0.12 C6orf223
 chromosome 6 open reading frame 223
 73962
 0.08
chr3_12879901_12880174 0.12 ENSG00000207496
 .
 1912
 0.22
chr10_35626541_35627695 0.12 CCNY
 cyclin Y
 1316
 0.4
chr4_169752762_169753076 0.12 PALLD
 palladin, cytoskeletal associated protein
 237
 0.89
chr7_156739962_156740113 0.12 NOM1
 nucleolar protein with MIF4G domain 1
 2380
 0.29
chr2_65453360_65453632 0.12 ACTR2
 ARP2 actin-related protein 2 homolog (yeast)
 1391
 0.5
chr3_194391812_194392295 0.12 LSG1
 large 60S subunit nuclear export GTPase 1
 1153
 0.38
chr19_8383856_8384007 0.12 NDUFA7
 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa
 2349
 0.15
chr11_46535797_46536138 0.12 ENSG00000265014
 .
 62528
 0.09
chr12_76414837_76415483 0.12 RP11-290L1.3
9114
 0.19
chr3_177624333_177624484 0.12 ENSG00000199858
 .
 101159
 0.09
chr2_86408072_86408223 0.12 IMMT
 inner membrane protein, mitochondrial
 7262
 0.12
chr5_57557351_57557502 0.12 ENSG00000238899
 .
 191411
 0.03
chr2_102681351_102681502 0.12 IL1R1
 interleukin 1 receptor, type I
 422
 0.88
chr1_2205577_2205728 0.12 SKI
 v-ski avian sarcoma viral oncogene homolog
 45518
 0.08
chr16_9189167_9189953 0.12 C16orf72
 chromosome 16 open reading frame 72
 4055
 0.18
chr20_37485148_37485299 0.12 ENSG00000240474
 .
 16190
 0.19
chr9_34252490_34252641 0.12 ENSG00000222426
 .
 30103
 0.1
chrX_13007464_13007615 0.12 TMSB4X
 thymosin beta 4, X-linked
 13762
 0.22
chr3_111793003_111793154 0.12 C3orf52
 chromosome 3 open reading frame 52
 12104
 0.16
chr1_151592190_151592613 0.11 RP11-404E16.1
6562
 0.11
chr1_83030740_83030891 0.11 LPHN2
 latrophilin 2
 585242
 0.0
chr12_22387753_22387904 0.11 ST8SIA1
 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
 14152
 0.25
chr5_14810981_14811591 0.11 ENSG00000264792
 .
 14835
 0.24
chr3_156510400_156510551 0.11 LEKR1
 leucine, glutamate and lysine rich 1
 33614
 0.21
chr11_124542402_124542553 0.11 SPA17
 sperm autoantigenic protein 17
 1217
 0.28
chr17_27897968_27898119 0.11 TP53I13
 tumor protein p53 inducible protein 13
 1405
 0.19
chr10_131750921_131751072 0.11 EBF3
 early B-cell factor 3
 11109
 0.3
chr15_52753628_52753923 0.11 MYO5A
 myosin VA (heavy chain 12, myoxin)
 25908
 0.21
chr4_119608098_119608296 0.11 METTL14
 methyltransferase like 14
 1627
 0.48
chr7_104918256_104918407 0.11 SRPK2
 SRSF protein kinase 2
 8869
 0.22
chr1_43151129_43151715 0.11 YBX1
 Y box binding protein 1
 2764
 0.23
chrX_22318328_22318479 0.11 ZNF645
 zinc finger protein 645
 27338
 0.25
chr2_205995260_205995411 0.11 NRP2
 neuropilin 2
 551889
 0.0
chr11_122603673_122604064 0.11 ENSG00000239079
 .
 6849
 0.26
chr4_151231130_151231281 0.11 LRBA
 LPS-responsive vesicle trafficking, beach and anchor containing
 7342
 0.31
chr1_225843948_225844099 0.11 ENAH
 enabled homolog (Drosophila)
 3179
 0.27
chr4_54975045_54975230 0.11 ENSG00000221219
 .
 5314
 0.18
chr13_109783595_109783805 0.11 MYO16-AS2
 MYO16 antisense RNA 2
 29433
 0.24
chr1_229415776_229415934 0.11 RAB4A
 RAB4A, member RAS oncogene family
 8976
 0.15
chr5_109029475_109029626 0.11 MAN2A1
 mannosidase, alpha, class 2A, member 1
 4483
 0.22
chr5_57484730_57484881 0.11 ENSG00000238899
 .
 118790
 0.06
chr20_43590444_43590650 0.11 TOMM34
 translocase of outer mitochondrial membrane 34
 1420
 0.33
chr11_45870605_45870756 0.11 CRY2
 cryptochrome 2 (photolyase-like)
 1723
 0.3
chr2_134900167_134900318 0.11 ENSG00000263813
 .
 15546
 0.23
chr11_57539746_57540045 0.11 CTNND1
 catenin (cadherin-associated protein), delta 1
 8570
 0.15
chr4_129733836_129734549 0.11 JADE1
 jade family PHD finger 1
 1193
 0.62
chr2_203498647_203499096 0.11 FAM117B
 family with sequence similarity 117, member B
 1030
 0.67
chr20_48470048_48470199 0.11 ENSG00000252123
 .
 25594
 0.13
chr10_23634401_23634613 0.11 C10orf67
 chromosome 10 open reading frame 67
 733
 0.58
chr9_89696027_89696178 0.11 C9orf170
 chromosome 9 open reading frame 170
 67457
 0.13
chr3_48858285_48858436 0.11 PRKAR2A-AS1
 PRKAR2A antisense RNA 1
 26645
 0.12
chr1_115866355_115866506 0.11 NGF
 nerve growth factor (beta polypeptide)
 14427
 0.24
chr11_62439776_62440015 0.11 C11orf48
 chromosome 11 open reading frame 48
 168
 0.78
chr15_67492948_67493403 0.11 SMAD3
 SMAD family member 3
 16062
 0.2
chr13_32663117_32663268 0.11 FRY
 furry homolog (Drosophila)
 28191
 0.21
chr1_180600327_180600734 0.11 XPR1
 xenotropic and polytropic retrovirus receptor 1
 610
 0.8
chr12_72240351_72240502 0.11 TBC1D15
 TBC1 domain family, member 15
 6868
 0.27
chr3_63954596_63954752 0.11 ATXN7
 ataxin 7
 1254
 0.4
chr12_24714032_24714515 0.11 ENSG00000240481
 .
 145449
 0.05

Histogram of CRE-TSS distances for CREs targeted by :

Histogram of

Rank distribution of CRE target scores:

Histogram of target CRE score.

Distribution of target CREs across different genomic regions:

Weighted Piechart of Weighted Piechart of Weighted Piechart of

Network of associatons between targets according to the STRING database.

StringDB image

First level regulatory network of HOXB13

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0043497 regulation of protein heterodimerization activity(GO:0043497)
0.1 0.2 GO:0070172 positive regulation of tooth mineralization(GO:0070172)
0.0 0.1 GO:0007352 zygotic specification of dorsal/ventral axis(GO:0007352)
0.0 0.2 GO:0090312 positive regulation of protein deacetylation(GO:0090312)
0.0 0.1 GO:0044413 evasion or tolerance of host defenses by virus(GO:0019049) avoidance of host defenses(GO:0044413) evasion or tolerance of host defenses(GO:0044415) avoidance of defenses of other organism involved in symbiotic interaction(GO:0051832) evasion or tolerance of defenses of other organism involved in symbiotic interaction(GO:0051834)
0.0 0.1 GO:0060676 ureteric bud formation(GO:0060676)
0.0 0.1 GO:0071731 response to nitric oxide(GO:0071731)
0.0 0.1 GO:0032467 positive regulation of cytokinesis(GO:0032467)
0.0 0.1 GO:0010800 positive regulation of peptidyl-threonine phosphorylation(GO:0010800)
0.0 0.0 GO:0015825 L-serine transport(GO:0015825)
0.0 0.0 GO:0072033 renal vesicle formation(GO:0072033)
0.0 0.0 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.0 0.2 GO:0019369 arachidonic acid metabolic process(GO:0019369)
0.0 0.0 GO:0071436 sodium ion export(GO:0071436)
0.0 0.1 GO:0006177 GMP biosynthetic process(GO:0006177)
0.0 0.0 GO:0016102 retinoic acid biosynthetic process(GO:0002138) diterpenoid biosynthetic process(GO:0016102)
0.0 0.0 GO:0010799 regulation of peptidyl-threonine phosphorylation(GO:0010799)
0.0 0.1 GO:0070934 CRD-mediated mRNA stabilization(GO:0070934)
0.0 0.1 GO:0007172 signal complex assembly(GO:0007172)
0.0 0.0 GO:0002606 positive regulation of dendritic cell antigen processing and presentation(GO:0002606)
0.0 0.0 GO:0007412 axon target recognition(GO:0007412)
0.0 0.0 GO:0001757 somite specification(GO:0001757)
0.0 0.0 GO:0060605 tube lumen cavitation(GO:0060605) salivary gland cavitation(GO:0060662)
0.0 0.1 GO:0042572 retinol metabolic process(GO:0042572)
0.0 0.0 GO:0090273 regulation of somatostatin secretion(GO:0090273)
0.0 0.0 GO:0000966 RNA 5'-end processing(GO:0000966)
0.0 0.0 GO:0090206 negative regulation of cholesterol biosynthetic process(GO:0045541) negative regulation of cholesterol metabolic process(GO:0090206)
0.0 0.0 GO:0017121 phospholipid scrambling(GO:0017121)
0.0 0.0 GO:0043276 anoikis(GO:0043276)
0.0 0.0 GO:0070837 dehydroascorbic acid transport(GO:0070837)
0.0 0.0 GO:0030185 nitric oxide transport(GO:0030185)
0.0 0.1 GO:0045747 positive regulation of Notch signaling pathway(GO:0045747)
0.0 0.1 GO:0045662 negative regulation of myoblast differentiation(GO:0045662)
0.0 0.1 GO:0045898 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898)
0.0 0.0 GO:0048003 antigen processing and presentation of lipid antigen via MHC class Ib(GO:0048003)
0.0 0.0 GO:0010837 regulation of keratinocyte proliferation(GO:0010837)
0.0 0.0 GO:0031558 obsolete induction of apoptosis in response to chemical stimulus(GO:0031558)
0.0 0.0 GO:0033689 negative regulation of osteoblast proliferation(GO:0033689)
0.0 0.1 GO:0051155 positive regulation of striated muscle cell differentiation(GO:0051155)
0.0 0.0 GO:0014012 peripheral nervous system axon regeneration(GO:0014012)
0.0 0.0 GO:0002072 optic cup morphogenesis involved in camera-type eye development(GO:0002072)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.0 GO:0005900 oncostatin-M receptor complex(GO:0005900)
0.0 0.1 GO:0070937 CRD-mediated mRNA stability complex(GO:0070937)
0.0 0.0 GO:0042629 mast cell granule(GO:0042629)
0.0 0.2 GO:0046930 pore complex(GO:0046930)
0.0 0.0 GO:0005899 insulin receptor complex(GO:0005899)
0.0 0.1 GO:0071437 invadopodium(GO:0071437)
0.0 0.1 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.1 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0051371 muscle alpha-actinin binding(GO:0051371)
0.0 0.2 GO:0051400 BH domain binding(GO:0051400)
0.0 0.2 GO:0004862 cAMP-dependent protein kinase inhibitor activity(GO:0004862)
0.0 0.1 GO:0001098 basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099)
0.0 0.1 GO:0052650 NADP-retinol dehydrogenase activity(GO:0052650)
0.0 0.1 GO:0005010 insulin-like growth factor-activated receptor activity(GO:0005010)
0.0 0.2 GO:0070410 co-SMAD binding(GO:0070410)
0.0 0.2 GO:0048531 beta-1,3-galactosyltransferase activity(GO:0048531)
0.0 0.1 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.0 0.1 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.0 0.0 GO:0004924 oncostatin-M receptor activity(GO:0004924)
0.0 0.0 GO:0022889 L-serine transmembrane transporter activity(GO:0015194) serine transmembrane transporter activity(GO:0022889)
0.0 0.1 GO:0070087 chromo shadow domain binding(GO:0070087)
0.0 0.0 GO:0042808 obsolete neuronal Cdc2-like kinase binding(GO:0042808)
0.0 0.0 GO:0046935 1-phosphatidylinositol-3-kinase regulator activity(GO:0046935)
0.0 0.0 GO:0008934 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.0 0.1 GO:0045499 chemorepellent activity(GO:0045499)
0.0 0.0 GO:0070548 L-glutamine aminotransferase activity(GO:0070548)
0.0 0.1 GO:0004908 interleukin-1 receptor activity(GO:0004908)
0.0 0.1 GO:0004661 protein geranylgeranyltransferase activity(GO:0004661)
0.0 0.0 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.0 0.0 GO:0017128 phospholipid scramblase activity(GO:0017128)
0.0 0.0 GO:0033300 dehydroascorbic acid transporter activity(GO:0033300)
0.0 0.0 GO:0005134 interleukin-2 receptor binding(GO:0005134)
0.0 0.1 GO:0030332 cyclin binding(GO:0030332)
0.0 0.0 GO:0000900 translation repressor activity, nucleic acid binding(GO:0000900)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 SA PROGRAMMED CELL DEATH Programmed cell death, or apoptosis, eliminates damaged or unneeded cells.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.0 REACTOME AUTODEGRADATION OF THE E3 UBIQUITIN LIGASE COP1 Genes involved in Autodegradation of the E3 ubiquitin ligase COP1
0.0 0.1 REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK Genes involved in Regulation of Rheb GTPase activity by AMPK
0.0 0.1 REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis
0.0 0.2 REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity