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ENCODE: ATAC-seq of different tissues during embryonic development
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Results for Arid5a

Z-value: 1.11

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Transcription factors associated with Arid5a

Gene Symbol Gene ID Gene Info
ENSMUSG00000037447.10 AT rich interactive domain 5A (MRF1-like)

Correlations of motif activity and signal intensity at CREs associated with the motif's TFs:

This plot shows correlation between observed signal intensity of a CRE associated with the transcription factor across all samples and activity of the motif.

For each TF, only the top 5 correlated CREs are shown.

Activity of the Arid5a motif across conditions

embryonicfacialprominence_E11.5embryonicfacialprominence_E12.5embryonicfacialprominence_E13.5embryonicfacialprominence_E14.5embryonicfacialprominence_E15.5forebrain_E11.5forebrain_E12.5forebrain_E13.5forebrain_E14.5forebrain_E15.5forebrain_E16.5forebrain_PN0heart_E11.5heart_E12.5heart_E13.5heart_E14.5heart_E15.5heart_E16.5heart_PN0hindbrain_E11.5hindbrain_E12.5hindbrain_E13.5hindbrain_E14.5hindbrain_E15.5hindbrain_E16.5hindbrain_PN0intestine_E14.5intestine_E15.5intestine_E16.5intestine_PN0kidney_E14.5kidney_E15.5kidney_E16.5kidney_PN0limb_E11.5limb_E12.5limb_E13.5limb_E14.5limb_E15.5liver_E11.5liver_E12.5liver_E13.5liver_E14.5liver_E15.5liver_E16.5liver_PN0lung_E14.5lung_E15.5lung_E16.5lung_PN0neuraltube_E11.5neuraltube_E12.5neuraltube_E13.5neuraltube_E14.5neuraltube_E15.5−0.3−0.2−0.100.10.20.3
sampleactivity

Conditions sorted by the z-value of the Arid5a motif activity

Move your cursor over a bar to see sample name and corresponding Z-value.

Top target CREs of the motif:

Histogram of CRE-TSS distances for CREs targeted by :

Histogram of

Rank distribution of CRE target scores:

Histogram of target CRE score.

Distribution of target CREs across different genomic regions:

Weighted Piechart of Weighted Piechart of Weighted Piechart of

Network of associatons between targets according to the STRING database.

First level regulatory network of Arid5a

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: