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ENCSR904DTN: DNase-seq of mouse liver in constant darkness
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Results for Gli1

Z-value: 0.66

Motif logo

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Transcription factors associated with Gli1

Gene Symbol Gene ID Gene Info
Gli1
ENSMUSG00000025407.6 GLI-Kruppel family member GLI1

Correlations of motif activity and signal intensity at CREs associated with the motif's TFs:

This plot shows correlation between observed signal intensity of a CRE associated with the transcription factor across all samples and activity of the motif.

For each TF, only the top 5 correlated CREs are shown.

CRE Gene Distance Association probability Pearson corr. coef. P-value Plot
chr10_127342400_127342556Gli15040.573543-0.364.9e-01Click!
chr10_127339210_127339386Gli16610.4522150.197.2e-01Click!
chr10_127338950_127339111Gli19290.317120-0.177.5e-01Click!
chr10_127342165_127342330Gli12730.7864970.039.5e-01Click!
chr10_127341973_127342136Gli1800.9240800.001.0e+00Click!

Activity of the Gli1 motif across conditions

Conditions sorted by the z-value of the Gli1 motif activity

Move your cursor over a bar to see sample name and corresponding Z-value.

Top target CREs of the motif:

Cis Regulatory Element (CRE) Target Score Top associated gene Gene Info Distance of CRE to TSS CRE/Gene association probability
chr2_33430783_33430934 0.46 Zbtb34
 zinc finger and BTB domain containing 34
 459
 0.78
chr13_93627456_93627944 0.45 Gm15622
 predicted gene 15622
 2318
 0.25
chr19_3840572_3840723 0.45 Chka
 choline kinase alpha
 11126
 0.09
chr15_100625793_100625948 0.40 Dazap2
 DAZ associated protein 2
 9538
 0.08
chr2_103846113_103846314 0.34 Gm13879
 predicted gene 13879
 2557
 0.13
chr3_108011504_108011674 0.33 Gstm1
 glutathione S-transferase, mu 1
 1727
 0.15
chr11_86954758_86954966 0.33 Ypel2
 yippee like 2
 17162
 0.18
chr5_33726324_33726568 0.32 Fgfr3
 fibroblast growth factor receptor 3
 2674
 0.15
chr7_127804168_127804541 0.30 9430064I24Rik
 RIKEN cDNA 9430064I24 gene
 1592
 0.16
chr2_167260546_167260697 0.30 Ptgis
 prostaglandin I2 (prostacyclin) synthase
 20017
 0.13
chr15_27560020_27560329 0.30 Ank
 progressive ankylosis
 11273
 0.16
chr8_124843018_124843401 0.29 Gm16163
 predicted gene 16163
 11511
 0.11
chr11_119056746_119056911 0.28 Cbx8
 chromobox 8
 15859
 0.14
chr19_46133855_46134398 0.27 Elovl3
 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
 2229
 0.19
chr6_141875439_141875590 0.25 Gm30784
 predicted gene, 30784
 9156
 0.21
chr3_121168919_121169132 0.25 Gm10652
 predicted gene 10652
 369
 0.83
chr10_59978256_59978409 0.25 Anapc16
 anaphase promoting complex subunit 16
 12051
 0.16
chr8_13889986_13890137 0.24 Coprs
 coordinator of PRMT5, differentiation stimulator
 71
 0.95
chr10_76580112_76580438 0.22 Ftcd
 formiminotransferase cyclodeaminase
 4623
 0.13
chr1_72836877_72837059 0.22 Igfbp2
 insulin-like growth factor binding protein 2
 11646
 0.21
chr5_110809507_110809658 0.22 Ulk1
 unc-51 like kinase 1
 471
 0.7
chr11_60113222_60113373 0.21 4930412M03Rik
 RIKEN cDNA 4930412M03 gene
 1933
 0.28
chr15_89378952_89379124 0.21 Odf3b
 outer dense fiber of sperm tails 3B
 35
 0.93
chr6_117431300_117431501 0.21 Gm4640
 predicted gene 4640
 7783
 0.22
chr12_28898892_28899474 0.21 Gm31508
 predicted gene, 31508
 11046
 0.17
chr5_93282543_93282755 0.21 Ccng2
 cyclin G2
 13941
 0.18
chr19_4623588_4623859 0.21 Mir6986
 microRNA 6986
 232
 0.84
chr9_46230822_46231218 0.21 Apoa1
 apolipoprotein A-I
 2299
 0.14
chr16_91379054_91379459 0.21 Ifnar2
 interferon (alpha and beta) receptor 2
 6357
 0.12
chr19_16437834_16438025 0.20 Gna14
 guanine nucleotide binding protein, alpha 14
 1371
 0.4
chr3_96451459_96451723 0.20 BC107364
 cDNA sequence BC107364
 715
 0.31
chr3_96458907_96459172 0.20 Gm10685
 predicted gene 10685
 830
 0.26
chr8_41041775_41041987 0.20 Mtus1
 mitochondrial tumor suppressor 1
 15
 0.97
chr8_46386589_46386784 0.19 Gm45253
 predicted gene 45253
 798
 0.57
chr19_61049084_61049293 0.19 Gm22520
 predicted gene, 22520
 35643
 0.14
chr3_96402109_96402496 0.19 Gm26654
 predicted gene, 26654
 79
 0.72
chr11_75196330_75196483 0.19 Rtn4rl1
 reticulon 4 receptor-like 1
 2623
 0.15
chr2_36092832_36093004 0.18 Lhx6
 LIM homeobox protein 6
 1355
 0.33
chr7_19955922_19956099 0.18 Rpl7a-ps8
 ribosomal protein L7A, pseudogene 8
 2227
 0.14
chr14_31427037_31427204 0.18 Sh3bp5
 SH3-domain binding protein 5 (BTK-associated)
 8945
 0.15
chr1_153900403_153900624 0.18 Glul
 glutamate-ammonia ligase (glutamine synthetase)
 72
 0.72
chr9_48755281_48755902 0.17 Zbtb16
 zinc finger and BTB domain containing 16
 80354
 0.09
chr18_35831562_35831748 0.17 Gm29417
 predicted gene 29417
 562
 0.55
chr12_104414666_104414826 0.17 Gm24334
 predicted gene, 24334
 4654
 0.15
chr9_31851816_31851990 0.17 Gm31497
 predicted gene, 31497
 54090
 0.1
chr8_126774523_126774869 0.17 Gm45805
 predicted gene 45805
 16362
 0.22
chr4_33284555_33284721 0.17 Pnrc1
 proline-rich nuclear receptor coactivator 1
 5525
 0.18
chr17_25727890_25728059 0.17 Rpusd1
 RNA pseudouridylate synthase domain containing 1
 242
 0.65
chr5_120560470_120560640 0.17 2510016D11Rik
 RIKEN cDNA 2510016D11 gene
 7516
 0.1
chr8_126685189_126685340 0.16 Gm45805
 predicted gene 45805
 73070
 0.1
chr1_39205802_39205953 0.16 Npas2
 neuronal PAS domain protein 2
 11665
 0.18
chr2_94047308_94047485 0.16 Hsd17b12
 hydroxysteroid (17-beta) dehydrogenase 12
 19073
 0.16
chr8_119443770_119443946 0.16 Necab2
 N-terminal EF-hand calcium binding protein 2
 2861
 0.21
chr15_99716487_99716652 0.16 Gpd1
 glycerol-3-phosphate dehydrogenase 1 (soluble)
 946
 0.3
chr15_79351473_79351624 0.16 Maff
 v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
 3146
 0.14
chr13_43493297_43493485 0.16 Gm47683
 predicted gene, 47683
 6776
 0.14
chr8_105759107_105759440 0.16 Gfod2
 glucose-fructose oxidoreductase domain containing 2
 609
 0.58
chr7_81541084_81541411 0.16 Gm37829
 predicted gene, 37829
 8726
 0.1
chr8_13350961_13351112 0.16 Tfdp1
 transcription factor Dp 1
 11362
 0.12
chr14_30916422_30916581 0.16 Itih3
 inter-alpha trypsin inhibitor, heavy chain 3
 1114
 0.35
chr1_39612023_39612366 0.16 Gm5100
 predicted gene 5100
 14189
 0.12
chr14_70338039_70338256 0.15 Slc39a14
 solute carrier family 39 (zinc transporter), member 14
 3949
 0.15
chr9_57283258_57283868 0.15 1700017B05Rik
 RIKEN cDNA 1700017B05 gene
 20951
 0.14
chr9_120731019_120731170 0.15 Gm47064
 predicted gene, 47064
 20049
 0.12
chr10_67536858_67537009 0.15 Egr2
 early growth response 2
 936
 0.47
chr1_134065116_134065322 0.15 Btg2
 BTG anti-proliferation factor 2
 13901
 0.12
chr4_56961559_56961774 0.15 Tmem245
 transmembrane protein 245
 14229
 0.15
chr5_9038233_9038384 0.15 Gm40264
 predicted gene, 40264
 3184
 0.2
chr16_97918472_97918638 0.14 C2cd2
 C2 calcium-dependent domain containing 2
 4051
 0.21
chr1_93686775_93686953 0.14 Bok
 BCL2-related ovarian killer
 601
 0.66
chr3_96646975_96647126 0.14 Itga10
 integrin, alpha 10
 1466
 0.17
chr10_121423941_121424099 0.14 Gm18730
 predicted gene, 18730
 23307
 0.11
chr10_58233103_58233399 0.14 Duxf3
 double homeobox family member 3
 576
 0.63
chr9_62344600_62344925 0.14 Anp32a
 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
 37
 0.98
chr7_110853928_110854130 0.14 Lyve1
 lymphatic vessel endothelial hyaluronan receptor 1
 8924
 0.15
chr11_51832795_51832987 0.14 Jade2
 jade family PHD finger 2
 24234
 0.15
chr13_45907083_45907460 0.14 4930453C13Rik
 RIKEN cDNA 4930453C13 gene
 28769
 0.18
chr7_141478122_141478322 0.14 Tspan4
 tetraspanin 4
 1822
 0.13
chr11_81374622_81374773 0.14 4930527B05Rik
 RIKEN cDNA 4930527B05 gene
 10316
 0.3
chr15_82668190_82668753 0.14 Cyp2d35-ps
 cytochrome P450, family 2, subfamily d, member 35, pseudogene
 13760
 0.07
chr8_35290423_35290789 0.14 Gm34597
 predicted gene, 34597
 45127
 0.11
chr8_126656995_126657172 0.13 Irf2bp2
 interferon regulatory factor 2 binding protein 2
 63097
 0.12
chr17_4199793_4199983 0.13 4930548J01Rik
 RIKEN cDNA 4930548J01 gene
 77775
 0.11
chr11_67535494_67535665 0.13 Gas7
 growth arrest specific 7
 11575
 0.23
chr3_36079982_36080141 0.13 Acad9
 acyl-Coenzyme A dehydrogenase family, member 9
 85
 0.95
chr7_24653592_24653770 0.13 Gm4598
 predicted gene 4598
 7613
 0.08
chr2_32259552_32259703 0.13 Uck1
 uridine-cytidine kinase 1
 6
 0.94
chr4_155028352_155028518 0.13 Plch2
 phospholipase C, eta 2
 9003
 0.13
chr8_116185346_116185497 0.13 4930422C21Rik
 RIKEN cDNA 4930422C21 gene
 1948
 0.49
chr15_36476548_36476699 0.13 Ankrd46
 ankyrin repeat domain 46
 20092
 0.13
chr16_24082765_24082916 0.13 Gm46545
 predicted gene, 46545
 150
 0.95
chr4_141536459_141536662 0.13 Spen
 spen family transcription repressor
 1693
 0.27
chr14_30939550_30939725 0.13 Itih1
 inter-alpha trypsin inhibitor, heavy chain 1
 3640
 0.13
chr11_75430733_75430997 0.13 Gm12337
 predicted gene 12337
 3112
 0.11
chr11_101728654_101728805 0.13 Dhx8
 DEAH (Asp-Glu-Ala-His) box polypeptide 8
 4190
 0.16
chr12_37906736_37906912 0.13 Dgkb
 diacylglycerol kinase, beta
 26108
 0.21
chr9_108083457_108083608 0.13 Rnf123
 ring finger protein 123
 186
 0.77
chr2_155272603_155272754 0.13 Map1lc3a
 microtubule-associated protein 1 light chain 3 alpha
 3619
 0.2
chr4_134399064_134399223 0.13 Pafah2
 platelet-activating factor acetylhydrolase 2
 1672
 0.26
chr18_67800429_67800656 0.13 Cep192
 centrosomal protein 192
 408
 0.57
chr4_49501233_49501521 0.13 Baat
 bile acid-Coenzyme A: amino acid N-acyltransferase
 1743
 0.25
chr4_53263517_53263892 0.13 AI427809
 expressed sequence AI427809
 127
 0.96
chr1_138322744_138322953 0.13 Atp6v1g3
 ATPase, H+ transporting, lysosomal V1 subunit G3
 49110
 0.12
chr1_131963395_131963600 0.13 Slc45a3
 solute carrier family 45, member 3
 530
 0.42
chr16_30550091_30550467 0.12 Tmem44
 transmembrane protein 44
 249
 0.93
chr5_9059465_9059641 0.12 Gm40264
 predicted gene, 40264
 24429
 0.13
chr6_48595408_48595586 0.12 Repin1
 replication initiator 1
 1178
 0.2
chr11_70489793_70489955 0.12 Tm4sf5
 transmembrane 4 superfamily member 5
 15370
 0.06
chr15_36933623_36933947 0.12 Gm41300
 predicted gene, 41300
 2099
 0.27
chr18_46713777_46714063 0.12 Cdo1
 cysteine dioxygenase 1, cytosolic
 14109
 0.13
chr8_106936247_106936398 0.12 Sntb2
 syntrophin, basic 2
 173
 0.92
chr5_114581477_114581628 0.12 Fam222a
 family with sequence similarity 222, member A
 13535
 0.15
chr8_35410788_35410939 0.12 Gm45301
 predicted gene 45301
 1357
 0.39
chr17_36019112_36019264 0.12 H2-T24
 histocompatibility 2, T region locus 24
 1337
 0.17
chr12_105546152_105546368 0.12 Gm47796
 predicted gene, 47796
 15003
 0.14
chr15_100682914_100683075 0.12 Cela1
 chymotrypsin-like elastase family, member 1
 125
 0.93
chr1_133307113_133307383 0.12 Golt1a
 golgi transport 1A
 2552
 0.17
chr15_77160485_77160636 0.12 Rbfox2
 RNA binding protein, fox-1 homolog (C. elegans) 2
 6748
 0.15
chr11_109502246_109502399 0.12 Gm22378
 predicted gene, 22378
 2498
 0.21
chr6_72624193_72624362 0.12 Gm15401
 predicted gene 15401
 5011
 0.09
chr8_90371977_90372137 0.12 Tox3
 TOX high mobility group box family member 3
 23714
 0.27
chr8_126694488_126694675 0.12 Gm45805
 predicted gene 45805
 63753
 0.12
chr1_132318004_132318180 0.12 Nuak2
 NUAK family, SNF1-like kinase, 2
 1927
 0.22
chr7_143502927_143503132 0.12 Phlda2
 pleckstrin homology like domain, family A, member 2
 36
 0.96
chr11_58307244_58307445 0.12 Zfp692
 zinc finger protein 692
 172
 0.9
chr3_88406373_88406524 0.12 Pmf1
 polyamine-modulated factor 1
 3817
 0.08
chr1_182648871_182649054 0.12 Gm37516
 predicted gene, 37516
 30977
 0.15
chr5_124636798_124636967 0.12 Atp6v0a2
 ATPase, H+ transporting, lysosomal V0 subunit A2
 7713
 0.14
chr11_101733748_101733899 0.12 Dhx8
 DEAH (Asp-Glu-Ala-His) box polypeptide 8
 782
 0.56
chr7_141628129_141628296 0.11 Mir7063
 microRNA 7063
 7511
 0.13
chr10_22645135_22645353 0.11 Slc2a12
 solute carrier family 2 (facilitated glucose transporter), member 12
 233
 0.94
chr11_62487650_62487823 0.11 Gm12278
 predicted gene 12278
 4939
 0.13
chr1_180227522_180227852 0.11 Psen2
 presenilin 2
 1881
 0.26
chr15_86275887_86276051 0.11 Tbc1d22a
 TBC1 domain family, member 22a
 40464
 0.16
chr1_181210349_181210792 0.11 Wdr26
 WD repeat domain 26
 856
 0.52
chr15_97059709_97059903 0.11 Slc38a4
 solute carrier family 38, member 4
 3850
 0.33
chr10_127903210_127903408 0.11 Sdr9c7
 4short chain dehydrogenase/reductase family 9C, member 7
 105
 0.93
chr5_92110647_92110859 0.11 Gm24931
 predicted gene, 24931
 7530
 0.13
chr13_43525896_43526216 0.11 Gm32939
 predicted gene, 32939
 4164
 0.16
chr2_167944308_167944486 0.11 Ptpn1
 protein tyrosine phosphatase, non-receptor type 1
 6651
 0.19
chr6_38343853_38344004 0.11 Zc3hav1
 zinc finger CCCH type, antiviral 1
 10345
 0.13
chr12_25249300_25249688 0.11 Gm19340
 predicted gene, 19340
 33101
 0.15
chr2_26974148_26974379 0.11 Adamts13
 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13
 770
 0.43
chr14_48138613_48138798 0.11 Gm49310
 predicted gene, 49310
 4481
 0.16
chr15_67020007_67020163 0.11 Gm31342
 predicted gene, 31342
 19973
 0.18
chr12_104798236_104798545 0.11 Clmn
 calmin
 17519
 0.19
chr11_98769689_98769972 0.11 Nr1d1
 nuclear receptor subfamily 1, group D, member 1
 596
 0.57
chr10_95625719_95626123 0.11 Gm33336
 predicted gene, 33336
 6318
 0.14
chr19_43898660_43898822 0.11 Dnmbp
 dynamin binding protein
 8050
 0.14
chr13_63562924_63563160 0.11 Ptch1
 patched 1
 773
 0.56
chr11_4119733_4119903 0.11 Sec14l2
 SEC14-like lipid binding 2
 987
 0.33
chr10_41959970_41960121 0.11 Armc2
 armadillo repeat containing 2
 16077
 0.2
chr8_34147011_34147181 0.11 Leprotl1
 leptin receptor overlapping transcript-like 1
 63
 0.95
chr5_102460519_102460675 0.11 1700013M08Rik
 RIKEN cDNA 1700013M08 gene
 19399
 0.2
chr8_11921702_11921858 0.11 Gm45680
 predicted gene 45680
 26517
 0.14
chr6_72218048_72218558 0.11 Atoh8
 atonal bHLH transcription factor 8
 16234
 0.15
chr10_77551087_77551238 0.11 Itgb2
 integrin beta 2
 20782
 0.1
chr3_104220440_104221564 0.11 Magi3
 membrane associated guanylate kinase, WW and PDZ domain containing 3
 628
 0.6
chr5_33218123_33218481 0.11 Spon2
 spondin 2, extracellular matrix protein
 107
 0.96
chr10_28078586_28078966 0.11 Ptprk
 protein tyrosine phosphatase, receptor type, K
 3766
 0.28
chr4_123589098_123589491 0.11 Macf1
 microtubule-actin crosslinking factor 1
 16234
 0.16
chr15_98591099_98591252 0.10 Gm29331
 predicted gene 29331
 1185
 0.26
chr10_96231610_96231804 0.10 4930459C07Rik
 RIKEN cDNA 4930459C07 gene
 5500
 0.22
chr2_118726808_118726959 0.10 Plcb2
 phospholipase C, beta 2
 1476
 0.29
chr11_118215876_118216042 0.10 Cyth1
 cytohesin 1
 3066
 0.2
chr11_116435092_116435485 0.10 Ubald2
 UBA-like domain containing 2
 779
 0.48
chr2_144182222_144182616 0.10 Gm5535
 predicted gene 5535
 3333
 0.2
chr5_74304899_74305225 0.10 Gm15981
 predicted gene 15981
 11972
 0.16
chr17_5004485_5004673 0.10 Arid1b
 AT rich interactive domain 1B (SWI-like)
 8150
 0.25
chr15_10344412_10344563 0.10 Agxt2
 alanine-glyoxylate aminotransferase 2
 14045
 0.18
chr11_83944358_83944548 0.10 Ddx52
 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
 1802
 0.33
chr8_22124586_22124925 0.10 Nek5
 NIMA (never in mitosis gene a)-related expressed kinase 5
 283
 0.87
chr15_62063425_62063595 0.10 Pvt1
 Pvt1 oncogene
 24253
 0.23
chr13_32970123_32970274 0.10 Serpinb6b
 serine (or cysteine) peptidase inhibitor, clade B, member 6b
 1300
 0.35
chr16_94545906_94546079 0.10 Vps26c
 VPS26 endosomal protein sorting factor C
 19162
 0.16
chr16_75345372_75345557 0.10 Gm49677
 predicted gene, 49677
 53810
 0.16
chr17_26647402_26647562 0.10 Ergic1
 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
 11459
 0.13
chr8_90841291_90841442 0.10 Chd9
 chromodomain helicase DNA binding protein 9
 8301
 0.13
chr19_55754460_55754655 0.10 Tcf7l2
 transcription factor 7 like 2, T cell specific, HMG box
 11712
 0.28
chr4_105225983_105226273 0.10 Plpp3
 phospholipid phosphatase 3
 68781
 0.12
chr11_120493774_120493943 0.10 Gm11788
 predicted gene 11788
 1464
 0.16
chr13_32821794_32821951 0.10 Wrnip1
 Werner helicase interacting protein 1
 1106
 0.41
chr9_73050700_73050869 0.10 Rab27a
 RAB27A, member RAS oncogene family
 5800
 0.09
chr3_122462488_122462639 0.10 Gm25153
 predicted gene, 25153
 2164
 0.23
chr2_156190488_156190836 0.10 Phf20
 PHD finger protein 20
 5804
 0.13
chr13_37452717_37452952 0.10 Gm29458
 predicted gene 29458
 374
 0.73
chr14_63133928_63134119 0.10 Ctsb
 cathepsin B
 1495
 0.31
chr8_119426295_119426446 0.10 Osgin1
 oxidative stress induced growth inhibitor 1
 7754
 0.15
chr18_60737126_60737516 0.10 Ndst1
 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
 4171
 0.18
chr5_138823785_138824155 0.10 Gm5294
 predicted gene 5294
 3890
 0.23
chr9_123153278_123153441 0.10 Clec3b
 C-type lectin domain family 3, member b
 2413
 0.18
chr9_53355672_53355823 0.10 Exph5
 exophilin 5
 14558
 0.16
chr15_85710318_85710476 0.10 Mirlet7b
 microRNA let7b
 3078
 0.17
chr1_74190744_74190929 0.10 Cxcr1
 chemokine (C-X-C motif) receptor 1
 2399
 0.18
chr5_8971094_8971245 0.10 Gm15610
 predicted gene 15610
 779
 0.53
chr2_153214800_153214963 0.10 Tspyl3
 TSPY-like 3
 10560
 0.13
chr9_121388029_121388181 0.10 Trak1
 trafficking protein, kinesin binding 1
 3856
 0.22
chr2_129800360_129800704 0.10 Stk35
 serine/threonine kinase 35
 15
 0.98
chr2_75563293_75563456 0.10 Gm13655
 predicted gene 13655
 70008
 0.08
chr17_56609964_56610227 0.09 Micos13
 mitochondrial contact site and cristae organizing system subunit 13
 324
 0.78

Histogram of CRE-TSS distances for CREs targeted by :

Histogram of

Rank distribution of CRE target scores:

Histogram of target CRE score.

Distribution of target CREs across different genomic regions:

Weighted Piechart of Weighted Piechart of Weighted Piechart of

Network of associatons between targets according to the STRING database.

First level regulatory network of Gli1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0043985 histone H4-R3 methylation(GO:0043985)
0.0 0.1 GO:0043152 induction of bacterial agglutination(GO:0043152)
0.0 0.1 GO:0019676 ammonia assimilation cycle(GO:0019676)
0.0 0.2 GO:0043097 pyrimidine-containing compound salvage(GO:0008655) pyrimidine nucleoside salvage(GO:0043097)
0.0 0.1 GO:0051541 elastin metabolic process(GO:0051541)
0.0 0.1 GO:0021593 rhombomere morphogenesis(GO:0021593)
0.0 0.1 GO:1902065 response to L-glutamate(GO:1902065)
0.0 0.1 GO:2000823 regulation of androgen receptor activity(GO:2000823)
0.0 0.1 GO:0061144 alveolar secondary septum development(GO:0061144)
0.0 0.1 GO:0015772 disaccharide transport(GO:0015766) sucrose transport(GO:0015770) oligosaccharide transport(GO:0015772)
0.0 0.1 GO:0006362 transcription elongation from RNA polymerase I promoter(GO:0006362)
0.0 0.1 GO:0052490 negative regulation by symbiont of host apoptotic process(GO:0033668) negative regulation by symbiont of host programmed cell death(GO:0052041) negative regulation by organism of programmed cell death in other organism involved in symbiotic interaction(GO:0052490)
0.0 0.1 GO:0045200 establishment or maintenance of neuroblast polarity(GO:0045196) establishment of neuroblast polarity(GO:0045200)
0.0 0.1 GO:0071288 cellular response to mercury ion(GO:0071288)
0.0 0.1 GO:0006477 protein sulfation(GO:0006477)
0.0 0.1 GO:2001271 negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:2001271)
0.0 0.2 GO:0021684 cerebellar granular layer formation(GO:0021684) cerebellar granule cell differentiation(GO:0021707)
0.0 0.1 GO:0031119 tRNA pseudouridine synthesis(GO:0031119)
0.0 0.1 GO:0036066 protein O-linked fucosylation(GO:0036066)
0.0 0.1 GO:0009436 glyoxylate catabolic process(GO:0009436)
0.0 0.1 GO:0060743 epithelial cell maturation involved in prostate gland development(GO:0060743)
0.0 0.1 GO:0006216 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.0 0.1 GO:0071879 positive regulation of adrenergic receptor signaling pathway(GO:0071879)
0.0 0.0 GO:0032058 positive regulation of translational initiation in response to stress(GO:0032058)
0.0 0.1 GO:0048387 negative regulation of retinoic acid receptor signaling pathway(GO:0048387)
0.0 0.1 GO:1902744 negative regulation of lamellipodium organization(GO:1902744)
0.0 0.1 GO:0070857 regulation of bile acid biosynthetic process(GO:0070857)
0.0 0.1 GO:0021853 cerebral cortex GABAergic interneuron migration(GO:0021853) interneuron migration(GO:1904936)
0.0 0.2 GO:0060158 phospholipase C-activating dopamine receptor signaling pathway(GO:0060158)
0.0 0.1 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.0 0.0 GO:0030070 insulin processing(GO:0030070)
0.0 0.1 GO:0071265 amino acid salvage(GO:0043102) L-methionine biosynthetic process(GO:0071265) L-methionine salvage(GO:0071267)
0.0 0.0 GO:0045896 regulation of transcription during mitosis(GO:0045896) positive regulation of transcription during mitosis(GO:0045897)
0.0 0.0 GO:0045163 clustering of voltage-gated potassium channels(GO:0045163)
0.0 0.1 GO:0006642 triglyceride mobilization(GO:0006642)
0.0 0.0 GO:0035694 mitochondrial protein catabolic process(GO:0035694)
0.0 0.0 GO:0010901 regulation of very-low-density lipoprotein particle remodeling(GO:0010901)
0.0 0.1 GO:0008635 activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c(GO:0008635)
0.0 0.1 GO:0035428 hexose transmembrane transport(GO:0035428)
0.0 0.0 GO:0010908 regulation of heparan sulfate proteoglycan biosynthetic process(GO:0010908) positive regulation of heparan sulfate proteoglycan biosynthetic process(GO:0010909) positive regulation of proteoglycan biosynthetic process(GO:1902730)
0.0 0.0 GO:0018076 N-terminal peptidyl-lysine acetylation(GO:0018076)
0.0 0.0 GO:1902564 negative regulation of neutrophil activation(GO:1902564)
0.0 0.0 GO:1901844 regulation of cell communication by electrical coupling involved in cardiac conduction(GO:1901844)
0.0 0.0 GO:0048022 negative regulation of melanin biosynthetic process(GO:0048022) negative regulation of secondary metabolite biosynthetic process(GO:1900377)
0.0 0.1 GO:1904587 glycoprotein ERAD pathway(GO:0097466) response to glycoprotein(GO:1904587)
0.0 0.0 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 0.1 GO:0045053 protein retention in Golgi apparatus(GO:0045053)
0.0 0.0 GO:0034165 positive regulation of toll-like receptor 9 signaling pathway(GO:0034165)
0.0 0.0 GO:0007084 mitotic nuclear envelope reassembly(GO:0007084)
0.0 0.2 GO:0010758 regulation of macrophage chemotaxis(GO:0010758)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0097629 extrinsic component of omegasome membrane(GO:0097629)
0.0 0.1 GO:0005577 fibrinogen complex(GO:0005577)
0.0 0.1 GO:0097169 AIM2 inflammasome complex(GO:0097169)
0.0 0.1 GO:0034363 intermediate-density lipoprotein particle(GO:0034363)
0.0 0.1 GO:0016939 kinesin II complex(GO:0016939)
0.0 0.0 GO:0035061 interchromatin granule(GO:0035061)
0.0 0.0 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.0 GO:0034365 discoidal high-density lipoprotein particle(GO:0034365)
0.0 0.1 GO:0070876 SOSS complex(GO:0070876)
0.0 0.0 GO:0000172 ribonuclease MRP complex(GO:0000172)
0.0 0.1 GO:0035102 PRC1 complex(GO:0035102)
0.0 0.0 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.0 0.0 GO:0044322 endoplasmic reticulum quality control compartment(GO:0044322)
0.0 0.1 GO:0044294 dendritic growth cone(GO:0044294)
0.0 0.0 GO:0032937 SREBP-SCAP-Insig complex(GO:0032937)
0.0 0.0 GO:0010009 cytoplasmic side of endosome membrane(GO:0010009)
0.0 0.1 GO:0044326 dendritic spine neck(GO:0044326)
0.0 0.0 GO:1990907 beta-catenin-TCF complex(GO:1990907)
0.0 0.1 GO:0000120 RNA polymerase I transcription factor complex(GO:0000120)
0.0 0.0 GO:1990696 USH2 complex(GO:1990696)
0.0 0.0 GO:0097443 sorting endosome(GO:0097443)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0045503 dynein light chain binding(GO:0045503)
0.0 0.2 GO:0004849 uridine kinase activity(GO:0004849)
0.0 0.1 GO:0052650 NADP-retinol dehydrogenase activity(GO:0052650)
0.0 0.1 GO:0035939 microsatellite binding(GO:0035939)
0.0 0.1 GO:0034845 4-methyloctanoyl-CoA dehydrogenase activity(GO:0034580) naphthyl-2-methyl-succinyl-CoA dehydrogenase activity(GO:0034845) 2-methylhexanoyl-CoA dehydrogenase activity(GO:0034916) propionyl-CoA dehydrogenase activity(GO:0043820) thiol-driven fumarate reductase activity(GO:0043830) coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity(GO:0052758) coenzyme F420-dependent 2,4,6-trinitrophenol hydride reductase activity(GO:0052759) coenzyme F420-dependent 2,4-dinitrophenol reductase activity(GO:0052760)
0.0 0.1 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898)
0.0 0.1 GO:0008515 sucrose:proton symporter activity(GO:0008506) sucrose transmembrane transporter activity(GO:0008515) disaccharide transmembrane transporter activity(GO:0015154) oligosaccharide transmembrane transporter activity(GO:0015157)
0.0 0.1 GO:0070653 high-density lipoprotein particle receptor binding(GO:0070653)
0.0 0.1 GO:0050252 retinol O-fatty-acyltransferase activity(GO:0050252)
0.0 0.1 GO:0004103 choline kinase activity(GO:0004103)
0.0 0.0 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 0.1 GO:0045340 mercury ion binding(GO:0045340)
0.0 0.1 GO:0004126 cytidine deaminase activity(GO:0004126)
0.0 0.1 GO:0005007 fibroblast growth factor-activated receptor activity(GO:0005007)
0.0 0.0 GO:0019961 interferon binding(GO:0019961)
0.0 0.1 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.0 GO:0004920 interleukin-10 receptor activity(GO:0004920)
0.0 0.0 GO:0000171 ribonuclease MRP activity(GO:0000171)
0.0 0.1 GO:0015288 porin activity(GO:0015288)
0.0 0.0 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.1 GO:0019957 C-C chemokine binding(GO:0019957)
0.0 0.0 GO:0034988 Fc-gamma receptor I complex binding(GO:0034988)
0.0 0.0 GO:0005502 11-cis retinal binding(GO:0005502)
0.0 0.0 GO:0016509 long-chain-3-hydroxyacyl-CoA dehydrogenase activity(GO:0016509)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 PID THROMBIN PAR4 PATHWAY PAR4-mediated thrombin signaling events
0.0 0.1 PID LYSOPHOSPHOLIPID PATHWAY LPA receptor mediated events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE Genes involved in Regulation of Insulin Secretion by Acetylcholine
0.0 0.1 REACTOME RNA POL I PROMOTER OPENING Genes involved in RNA Polymerase I Promoter Opening
0.0 0.1 REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS Genes involved in Facilitative Na+-independent glucose transporters