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ENCSR904DTN: DNase-seq of mouse liver in constant darkness
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CREMA is a free online tool that recognizes most important transcription factors that change the chromatin state across different samples.

Results for Myod1

Z-value: 0.88

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Transcription factors associated with Myod1

Gene Symbol Gene ID Gene Info
Myod1
ENSMUSG00000009471.3 Myod1

Activity of the Myod1 motif across conditions

Conditions sorted by the z-value of the Myod1 motif activity

Move your cursor over a bar to see sample name and corresponding Z-value.

Top target CREs of the motif:

Cis Regulatory Element (CRE) Target Score Top associated gene Gene Info Distance of CRE to TSS CRE/Gene association probability
chr19_47222639_47222810 0.65 Gm50339
 predicted gene, 50339
 815
 0.48
chr19_46141233_46141384 0.61 Pitx3
 paired-like homeodomain transcription factor 3
 325
 0.82
chr9_63702505_63702656 0.54 Smad3
 SMAD family member 3
 9389
 0.23
chr2_167686580_167686731 0.45 Cebpb
 CCAAT/enhancer binding protein (C/EBP), beta
 2260
 0.17
chr5_8961694_8961940 0.44 Abcb4
 ATP-binding cassette, sub-family B (MDR/TAP), member 4
 3265
 0.17
chr12_26367487_26367659 0.43 4930549C15Rik
 RIKEN cDNA 4930549C15 gene
 20856
 0.16
chr6_121884163_121884602 0.43 Mug1
 murinoglobulin 1
 1195
 0.48
chr7_44810745_44811033 0.42 Atf5
 activating transcription factor 5
 4769
 0.08
chr6_86193078_86193250 0.41 Tgfa
 transforming growth factor alpha
 2059
 0.28
chr12_21141829_21142079 0.40 Asap2
 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
 30000
 0.17
chr15_25948371_25948535 0.38 Mir7212
 microRNA 7212
 226
 0.93
chr10_22361100_22361262 0.37 Raet1d
 retinoic acid early transcript delta
 629
 0.64
chr19_44930703_44930912 0.36 Slf2
 SMC5-SMC6 complex localization factor 2
 344
 0.83
chr10_8089529_8089695 0.35 Gm48614
 predicted gene, 48614
 68320
 0.11
chr19_61057184_61057369 0.35 Gm22520
 predicted gene, 22520
 43731
 0.12
chr2_26487761_26487912 0.34 Notch1
 notch 1
 15986
 0.09
chr8_121573324_121573508 0.34 Fbxo31
 F-box protein 31
 5331
 0.12
chr1_165617606_165617906 0.34 Mpzl1
 myelin protein zero-like 1
 3777
 0.14
chr12_21112874_21113025 0.33 Asap2
 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
 995
 0.59
chr10_63410268_63410432 0.31 Gm7530
 predicted gene 7530
 2649
 0.19
chr11_75435252_75435403 0.29 Serpinf2
 serine (or cysteine) peptidase inhibitor, clade F, member 2
 3573
 0.1
chr12_28910370_28910535 0.29 Gm31508
 predicted gene, 31508
 223
 0.94
chr1_119163374_119163565 0.28 Gm8321
 predicted gene 8321
 5883
 0.26
chr5_145984724_145985158 0.28 Cyp3a25
 cytochrome P450, family 3, subfamily a, polypeptide 25
 6702
 0.13
chr18_35887757_35887908 0.28 Gm36315
 predicted gene, 36315
 2505
 0.16
chr6_129542042_129542193 0.27 Gm44243
 predicted gene, 44243
 1896
 0.16
chr4_149978025_149978189 0.27 Spsb1
 splA/ryanodine receptor domain and SOCS box containing 1
 23064
 0.13
chr8_70182055_70182225 0.26 Tmem161a
 transmembrane protein 161A
 1601
 0.22
chr19_3362437_3362608 0.26 Cpt1a
 carnitine palmitoyltransferase 1a, liver
 3808
 0.17
chr2_164054518_164054669 0.26 Pabpc1l
 poly(A) binding protein, cytoplasmic 1-like
 6583
 0.14
chr7_80069741_80069903 0.26 Gm21057
 predicted gene, 21057
 5425
 0.12
chr4_142007387_142007541 0.26 Fhad1
 forkhead-associated (FHA) phosphopeptide binding domain 1
 4173
 0.15
chr5_43219459_43219610 0.26 Cpeb2
 cytoplasmic polyadenylation element binding protein 2
 13636
 0.15
chr13_37509524_37509684 0.26 Gm29590
 predicted gene 29590
 114
 0.93
chr1_40221808_40222119 0.25 Il1r1
 interleukin 1 receptor, type I
 3117
 0.26
chr15_36471981_36472313 0.25 Ankrd46
 ankyrin repeat domain 46
 24568
 0.12
chr8_128465325_128465813 0.25 Nrp1
 neuropilin 1
 106172
 0.06
chr13_29944599_29944759 0.25 Gm11365
 predicted gene 11365
 4396
 0.26
chr15_27560020_27560329 0.25 Ank
 progressive ankylosis
 11273
 0.16
chr10_127659568_127659719 0.25 Stat6
 signal transducer and activator of transcription 6
 243
 0.82
chr18_32239390_32239541 0.24 Ercc3
 excision repair cross-complementing rodent repair deficiency, complementation group 3
 835
 0.63
chr19_3340116_3340320 0.24 Cpt1a
 carnitine palmitoyltransferase 1a, liver
 1409
 0.32
chr10_93495910_93496061 0.23 Hal
 histidine ammonia lyase
 420
 0.79
chr18_60737126_60737516 0.23 Ndst1
 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
 4171
 0.18
chr10_119010946_119011297 0.23 Gm47461
 predicted gene, 47461
 10549
 0.17
chr6_72961723_72961891 0.23 Tmsb10
 thymosin, beta 10
 3059
 0.2
chr8_120445765_120445934 0.23 Gm22715
 predicted gene, 22715
 2300
 0.29
chr4_135265584_135265749 0.23 Clic4
 chloride intracellular channel 4 (mitochondrial)
 7148
 0.15
chr15_96621805_96622214 0.22 Slc38a1
 solute carrier family 38, member 1
 19953
 0.19
chr10_8195740_8196032 0.22 Gm30906
 predicted gene, 30906
 19755
 0.25
chr1_93136180_93136798 0.21 Agxt
 alanine-glyoxylate aminotransferase
 921
 0.46
chr5_102783650_102783814 0.21 Arhgap24
 Rho GTPase activating protein 24
 14961
 0.29
chr13_105300041_105300198 0.21 Rnf180
 ring finger protein 180
 5304
 0.3
chr2_93433097_93433274 0.21 Mir7001
 microRNA 7001
 11178
 0.15
chr7_135609185_135609546 0.21 Ptpre
 protein tyrosine phosphatase, receptor type, E
 3537
 0.23
chr2_26500647_26500810 0.21 Notch1
 notch 1
 3094
 0.15
chr5_121612399_121612564 0.21 Acad12
 acyl-Coenzyme A dehydrogenase family, member 12
 6382
 0.11
chr9_43545212_43545661 0.21 Gm36855
 predicted gene, 36855
 24432
 0.17
chr16_32685796_32686168 0.21 Tnk2
 tyrosine kinase, non-receptor, 2
 5168
 0.16
chr12_3806542_3806693 0.21 Dnmt3a
 DNA methyltransferase 3A
 90
 0.97
chr13_24949534_24949740 0.20 Gpld1
 glycosylphosphatidylinositol specific phospholipase D1
 6217
 0.14
chr4_49099577_49099740 0.20 Plppr1
 phospholipid phosphatase related 1
 40202
 0.18
chr5_139835784_139835950 0.20 Psmg3
 proteasome (prosome, macropain) assembly chaperone 3
 8982
 0.13
chr12_111449466_111449652 0.20 Tnfaip2
 tumor necrosis factor, alpha-induced protein 2
 41
 0.96
chr4_120067294_120067548 0.20 AL607142.1
 novel protein
 2425
 0.34
chr1_24693656_24693810 0.20 Lmbrd1
 LMBR1 domain containing 1
 14807
 0.17
chr15_97253131_97253396 0.20 Pced1b
 PC-esterase domain containing 1B
 4190
 0.23
chr9_108794998_108795174 0.20 Gm23034
 predicted gene, 23034
 302
 0.72
chr15_97019476_97019938 0.19 Slc38a4
 solute carrier family 38, member 4
 244
 0.95
chr15_98484617_98484776 0.19 Lalba
 lactalbumin, alpha
 1975
 0.14
chr2_145748022_145748197 0.19 Rin2
 Ras and Rab interactor 2
 36625
 0.17
chr17_12418655_12418810 0.19 Plg
 plasminogen
 40073
 0.12
chr7_113223800_113224075 0.19 Arntl
 aryl hydrocarbon receptor nuclear translocator-like
 10686
 0.21
chr14_14345872_14346046 0.19 Il3ra
 interleukin 3 receptor, alpha chain
 316
 0.78
chr2_32673636_32673820 0.19 Eng
 endoglin
 362
 0.62
chr8_120487540_120487709 0.19 Gse1
 genetic suppressor element 1, coiled-coil protein
 823
 0.56
chr4_137764393_137764571 0.19 Alpl
 alkaline phosphatase, liver/bone/kidney
 1993
 0.33
chr10_80260218_80260407 0.19 Gamt
 guanidinoacetate methyltransferase
 606
 0.42
chr17_56174394_56174545 0.19 Gm44397
 predicted gene, 44397
 2344
 0.15
chr12_99374413_99374572 0.19 Gm47132
 predicted gene, 47132
 2756
 0.19
chr8_123737238_123737441 0.18 Gm45781
 predicted gene 45781
 2197
 0.13
chr4_11615049_11615228 0.18 Gm11832
 predicted gene 11832
 131
 0.95
chr1_190044023_190044190 0.18 Smyd2
 SET and MYND domain containing 2
 121743
 0.05
chr3_100466870_100467200 0.18 Tent5c
 terminal nucleotidyltransferase 5C
 22159
 0.12
chr5_138998044_138998247 0.18 Pdgfa
 platelet derived growth factor, alpha
 775
 0.61
chr6_126034330_126034486 0.18 Ntf3
 neurotrophin 3
 130552
 0.05
chr8_33892250_33892401 0.18 Rbpms
 RNA binding protein gene with multiple splicing
 561
 0.74
chr4_149799592_149799754 0.18 Gm13065
 predicted gene 13065
 6254
 0.1
chr15_68399262_68399413 0.18 Gm20732
 predicted gene 20732
 36161
 0.13
chr3_138463193_138463467 0.18 Metap1
 methionyl aminopeptidase 1
 5624
 0.13
chr10_81644706_81644857 0.18 Ankrd24
 ankyrin repeat domain 24
 978
 0.32
chr19_38223407_38224029 0.18 Fra10ac1
 FRA10AC1 homolog (human)
 420
 0.83
chr18_20936854_20937178 0.18 Rnf125
 ring finger protein 125
 7609
 0.22
chr6_29117593_29117759 0.18 Gm25589
 predicted gene, 25589
 4070
 0.17
chr19_3840335_3840486 0.18 Chka
 choline kinase alpha
 11363
 0.09
chr15_67445781_67445973 0.18 1700012I11Rik
 RIKEN cDNA 1700012I11 gene
 219108
 0.02
chr4_118137948_118138112 0.17 St3gal3
 ST3 beta-galactoside alpha-2,3-sialyltransferase 3
 3116
 0.21
chr9_107689065_107689227 0.17 Sema3f
 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
 771
 0.43
chr14_41114673_41114824 0.17 Mat1a
 methionine adenosyltransferase I, alpha
 9367
 0.12
chr18_39498437_39498588 0.17 Nr3c1
 nuclear receptor subfamily 3, group C, member 1
 7211
 0.27
chr13_113536421_113536595 0.17 Gm34471
 predicted gene, 34471
 31259
 0.12
chr17_29138051_29138219 0.17 Rpl35a-ps3
 ribosomal protein L35A, pseudogene 3
 831
 0.4
chr12_103853006_103853292 0.17 Serpina1a
 serine (or cysteine) peptidase inhibitor, clade A, member 1A
 10402
 0.09
chr6_31188267_31188418 0.17 Lncpint
 long non-protein coding RNA, Trp53 induced transcript
 21826
 0.13
chr9_69306275_69306692 0.17 Rora
 RAR-related orphan receptor alpha
 16801
 0.21
chr1_72837329_72837510 0.16 Igfbp2
 insulin-like growth factor binding protein 2
 11280
 0.21
chr8_14257136_14257302 0.16 Gm26184
 predicted gene, 26184
 16092
 0.22
chr2_126585323_126585610 0.16 Hdc
 histidine decarboxylase
 12795
 0.17
chr12_39992836_39993213 0.16 Arl4a
 ADP-ribosylation factor-like 4A
 21460
 0.17
chr13_93940938_93941096 0.16 Gm24737
 predicted gene, 24737
 15293
 0.17
chr4_141124895_141125054 0.16 4921514A10Rik
 RIKEN cDNA 4921514A10 gene
 9314
 0.11
chr19_46623154_46623332 0.16 Wbp1l
 WW domain binding protein 1 like
 158
 0.94
chr19_61049084_61049293 0.16 Gm22520
 predicted gene, 22520
 35643
 0.14
chr7_18957606_18957786 0.16 Nanos2
 nanos C2HC-type zinc finger 2
 29704
 0.06
chr18_64332314_64332480 0.16 St8sia3os
 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand
 1309
 0.4
chr1_180219669_180219845 0.16 Gm37336
 predicted gene, 37336
 7356
 0.14
chr15_98733475_98733629 0.16 Fkbp11
 FK506 binding protein 11
 5354
 0.1
chr6_50890819_50891330 0.16 G930045G22Rik
 RIKEN cDNA G930045G22 gene
 12997
 0.17
chr14_30922623_30922783 0.16 Itih3
 inter-alpha trypsin inhibitor, heavy chain 3
 846
 0.45
chr7_141475336_141475516 0.16 Tspan4
 tetraspanin 4
 84
 0.73
chr2_33178304_33178466 0.16 Gm13528
 predicted gene 13528
 483
 0.76
chr6_126034904_126035055 0.16 Ntf3
 neurotrophin 3
 129981
 0.05
chr11_51918030_51918186 0.15 Gm39822
 predicted gene, 39822
 19142
 0.14
chr4_148614270_148614447 0.15 Tardbp
 TAR DNA binding protein
 1780
 0.22
chr5_63897329_63897492 0.15 0610040J01Rik
 RIKEN cDNA 0610040J01 gene
 19934
 0.16
chr19_47137759_47137924 0.15 Calhm2
 calcium homeostasis modulator family member 2
 453
 0.68
chr6_137612326_137612520 0.15 Gm44106
 predicted gene, 44106
 18848
 0.21
chr7_27129962_27130129 0.15 Gm15883
 predicted gene 15883
 629
 0.5
chr4_120072218_120072438 0.15 AL607142.1
 novel protein
 7332
 0.23
chr1_169916758_169916917 0.15 Ccdc190
 coiled-coil domain containing 190
 11811
 0.16
chr5_35973954_35974105 0.15 Afap1
 actin filament associated protein 1
 10159
 0.25
chr11_75431233_75431481 0.15 Gm12337
 predicted gene 12337
 3604
 0.1
chr7_141429450_141429618 0.15 Cend1
 cell cycle exit and neuronal differentiation 1
 43
 0.91
chr11_119976291_119976457 0.15 Baiap2
 brain-specific angiogenesis inhibitor 1-associated protein 2
 16353
 0.1
chr15_27564431_27564740 0.15 Ank
 progressive ankylosis
 6862
 0.17
chr11_32364448_32364599 0.15 Sh3pxd2b
 SH3 and PX domains 2B
 16683
 0.16
chr12_21209715_21209893 0.15 AC156032.1
37519
 0.12
chr1_75215946_75216124 0.15 Tuba4a
 tubulin, alpha 4A
 1379
 0.16
chr16_22436162_22436319 0.15 Etv5
 ets variant 5
 274
 0.91
chr19_6954083_6954250 0.15 Plcb3
 phospholipase C, beta 3
 681
 0.4
chr5_25006886_25007052 0.15 Prkag2
 protein kinase, AMP-activated, gamma 2 non-catalytic subunit
 11216
 0.18
chr2_164862516_164862709 0.15 Pltp
 phospholipid transfer protein
 4901
 0.1
chr10_80618275_80618470 0.15 Csnk1g2
 casein kinase 1, gamma 2
 4466
 0.08
chr7_6727518_6727687 0.14 Peg3
 paternally expressed 3
 2817
 0.13
chr19_10556208_10556399 0.14 Tmem216
 transmembrane protein 216
 65
 0.94
chr4_134485980_134486138 0.14 Gm13250
 predicted gene 13250
 7163
 0.1
chr12_111051690_111051903 0.14 Rcor1
 REST corepressor 1
 11998
 0.12
chr5_147880438_147880628 0.14 Slc46a3
 solute carrier family 46, member 3
 664
 0.66
chr4_124701480_124701631 0.14 Fhl3
 four and a half LIM domains 3
 835
 0.38
chr14_57747701_57747852 0.14 Lats2
 large tumor suppressor 2
 1198
 0.32
chr19_32388450_32388613 0.14 Sgms1
 sphingomyelin synthase 1
 19
 0.93
chr19_47412733_47413051 0.14 Sh3pxd2a
 SH3 and PX domains 2A
 2533
 0.32
chr6_89008983_89009134 0.14 4933427D06Rik
 RIKEN cDNA 4933427D06 gene
 58375
 0.1
chr14_59550998_59551166 0.14 Cdadc1
 cytidine and dCMP deaminase domain containing 1
 46754
 0.12
chr4_117737643_117737808 0.14 Gm12844
 predicted gene 12844
 8426
 0.13
chr19_34553030_34553190 0.14 Ifit2
 interferon-induced protein with tetratricopeptide repeats 2
 2400
 0.18
chr13_23914881_23915050 0.14 Slc17a4
 solute carrier family 17 (sodium phosphate), member 4
 3
 0.95
chr7_84135593_84135937 0.14 Abhd17c
 abhydrolase domain containing 17C
 12050
 0.15
chr19_3691348_3691719 0.14 Lrp5
 low density lipoprotein receptor-related protein 5
 4969
 0.12
chr11_67585142_67585306 0.14 Gas7
 growth arrest specific 7
 1276
 0.49
chr2_32167931_32168112 0.14 Gm27805
 predicted gene, 27805
 5150
 0.13
chr8_106574781_106574955 0.14 Gm10073
 predicted pseudogene 10073
 1518
 0.35
chr17_29438491_29438658 0.14 Gm36486
 predicted gene, 36486
 1126
 0.36
chr8_110931698_110931872 0.14 St3gal2
 ST3 beta-galactoside alpha-2,3-sialyltransferase 2
 136
 0.93
chr19_37814514_37814675 0.14 Gm9067
 predicted gene 9067
 30328
 0.16
chr4_120073207_120073378 0.14 AL607142.1
 novel protein
 8296
 0.23
chr15_82147771_82148080 0.14 Srebf2
 sterol regulatory element binding factor 2
 88
 0.94
chr12_36207522_36207673 0.14 Lrrc72
 leucine rich repeat containing 72
 10605
 0.14
chr2_179290486_179290655 0.14 Gm14293
 predicted gene 14293
 50080
 0.15
chr1_36528420_36528588 0.14 Gm38033
 predicted gene, 38033
 267
 0.81
chr7_16974127_16974283 0.14 Gm42372
 predicted gene, 42372
 8881
 0.09
chr12_103817168_103817505 0.14 Gm8893
 predicted gene 8893
 4907
 0.11
chr4_132063346_132063505 0.14 Epb41
 erythrocyte membrane protein band 4.1
 8672
 0.11
chr13_64178656_64179049 0.14 Habp4
 hyaluronic acid binding protein 4
 4752
 0.13
chr4_141513828_141514048 0.14 Spen
 spen family transcription repressor
 2971
 0.19
chr14_46016661_46017121 0.14 Gm6580
 predicted gene 6580
 10537
 0.17
chr11_40690363_40690782 0.14 Mat2b
 methionine adenosyltransferase II, beta
 2049
 0.29
chr10_71252490_71252774 0.14 Ube2d1
 ubiquitin-conjugating enzyme E2D 1
 4256
 0.15
chr2_164053751_164053902 0.14 Pabpc1l
 poly(A) binding protein, cytoplasmic 1-like
 5816
 0.14
chr5_111469920_111470194 0.13 Gm43119
 predicted gene 43119
 46468
 0.12
chr2_34407224_34407388 0.13 Mapkap1
 mitogen-activated protein kinase associated protein 1
 123
 0.96
chr19_7155448_7155628 0.13 Otub1
 OTU domain, ubiquitin aldehyde binding 1
 44926
 0.08
chr10_127326379_127326530 0.13 Arhgap9
 Rho GTPase activating protein 9
 2131
 0.13
chr5_28071886_28072263 0.13 Insig1
 insulin induced gene 1
 711
 0.49
chr12_111756775_111756948 0.13 Klc1
 kinesin light chain 1
 1988
 0.2
chr2_170345551_170345760 0.13 Bcas1
 breast carcinoma amplified sequence 1
 4085
 0.22
chr14_51101004_51101293 0.13 Rnase4
 ribonuclease, RNase A family 4
 4789
 0.09
chr11_79267281_79267540 0.13 Gm44787
 predicted gene 44787
 6434
 0.16
chr14_66147441_66147613 0.13 Chrna2
 cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal)
 6594
 0.17
chr11_86973771_86973954 0.13 Ypel2
 yippee like 2
 1838
 0.33
chr19_7155121_7155413 0.13 Otub1
 OTU domain, ubiquitin aldehyde binding 1
 45197
 0.08
chr15_85646987_85647149 0.13 Gm49539
 predicted gene, 49539
 985
 0.49
chr7_117616401_117616570 0.13 Xylt1
 xylosyltransferase 1
 140993
 0.05
chr17_31323497_31323678 0.13 Slc37a1
 solute carrier family 37 (glycerol-3-phosphate transporter), member 1
 1333
 0.36
chr3_10310720_10310871 0.13 Gm38364
 predicted gene, 38364
 1747
 0.2
chr7_80245940_80246186 0.13 Ttll13
 tubulin tyrosine ligase-like family, member 13
 313
 0.78
chr19_41290060_41290220 0.13 Tm9sf3
 transmembrane 9 superfamily member 3
 26143
 0.21
chr1_58183291_58183442 0.13 Aox3
 aldehyde oxidase 3
 13742
 0.17
chr2_163481751_163481907 0.13 Fitm2
 fat storage-inducing transmembrane protein 2
 9200
 0.11
chr6_145703763_145703927 0.13 Gm15704
 predicted gene 15704
 42428
 0.14

Histogram of CRE-TSS distances for CREs targeted by :

Histogram of

Rank distribution of CRE target scores:

Histogram of target CRE score.

Distribution of target CREs across different genomic regions:

Weighted Piechart of Weighted Piechart of Weighted Piechart of

Network of associatons between targets according to the STRING database.

StringDB image

First level regulatory network of Myod1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0046439 cysteine catabolic process(GO:0009093) L-cysteine catabolic process(GO:0019448) L-cysteine metabolic process(GO:0046439)
0.1 0.2 GO:0035771 interleukin-4-mediated signaling pathway(GO:0035771)
0.0 0.2 GO:0046499 S-adenosylmethioninamine metabolic process(GO:0046499)
0.0 0.1 GO:0021699 cerebellar cortex maturation(GO:0021699)
0.0 0.2 GO:0006548 histidine catabolic process(GO:0006548) imidazole-containing compound catabolic process(GO:0052805)
0.0 0.1 GO:0097296 activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:0097296)
0.0 0.2 GO:0003273 cell migration involved in endocardial cushion formation(GO:0003273)
0.0 0.1 GO:0045626 negative regulation of T-helper 1 cell differentiation(GO:0045626)
0.0 0.1 GO:2000591 positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway(GO:0035793) regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway(GO:1900238) positive regulation of metanephric mesenchymal cell migration(GO:2000591)
0.0 0.1 GO:0033499 galactose catabolic process via UDP-galactose(GO:0033499) glycolytic process from galactose(GO:0061623)
0.0 0.2 GO:0006686 sphingomyelin biosynthetic process(GO:0006686)
0.0 0.1 GO:0072367 regulation of lipid transport by regulation of transcription from RNA polymerase II promoter(GO:0072367)
0.0 0.1 GO:0002432 granuloma formation(GO:0002432)
0.0 0.1 GO:0002337 B-1a B cell differentiation(GO:0002337)
0.0 0.1 GO:0002121 inter-male aggressive behavior(GO:0002121)
0.0 0.1 GO:0048133 germ-line stem cell division(GO:0042078) male germ-line stem cell asymmetric division(GO:0048133) germline stem cell asymmetric division(GO:0098728)
0.0 0.1 GO:0045472 response to ether(GO:0045472)
0.0 0.1 GO:0061144 alveolar secondary septum development(GO:0061144)
0.0 0.1 GO:0097490 trunk segmentation(GO:0035290) trunk neural crest cell migration(GO:0036484) ventral trunk neural crest cell migration(GO:0036486) sympathetic neuron projection extension(GO:0097490) sympathetic neuron projection guidance(GO:0097491)
0.0 0.1 GO:0009449 gamma-aminobutyric acid biosynthetic process(GO:0009449)
0.0 0.1 GO:0010520 regulation of reciprocal meiotic recombination(GO:0010520)
0.0 0.0 GO:0010248 establishment or maintenance of transmembrane electrochemical gradient(GO:0010248)
0.0 0.1 GO:2000271 positive regulation of fibroblast apoptotic process(GO:2000271)
0.0 0.1 GO:0072675 osteoclast fusion(GO:0072675)
0.0 0.1 GO:0006868 glutamine transport(GO:0006868)
0.0 0.1 GO:0002159 desmosome assembly(GO:0002159)
0.0 0.0 GO:0007403 glial cell fate determination(GO:0007403)
0.0 0.1 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 0.2 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.0 0.1 GO:0007084 mitotic nuclear envelope reassembly(GO:0007084)
0.0 0.1 GO:0006553 lysine metabolic process(GO:0006553)
0.0 0.1 GO:0003176 aortic valve development(GO:0003176) aortic valve morphogenesis(GO:0003180)
0.0 0.1 GO:0043321 regulation of natural killer cell degranulation(GO:0043321)
0.0 0.1 GO:2001269 positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:2001269)
0.0 0.1 GO:1903525 regulation of membrane tubulation(GO:1903525)
0.0 0.5 GO:0070306 lens fiber cell differentiation(GO:0070306)
0.0 0.2 GO:0045741 positive regulation of epidermal growth factor-activated receptor activity(GO:0045741)
0.0 0.1 GO:0060800 regulation of cell differentiation involved in embryonic placenta development(GO:0060800)
0.0 0.1 GO:0061470 T follicular helper cell differentiation(GO:0061470)
0.0 0.1 GO:0035435 phosphate ion transmembrane transport(GO:0035435)
0.0 0.1 GO:2000659 regulation of interleukin-1-mediated signaling pathway(GO:2000659)
0.0 0.2 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000)
0.0 0.0 GO:0001828 inner cell mass cellular morphogenesis(GO:0001828)
0.0 0.1 GO:0042905 9-cis-retinoic acid biosynthetic process(GO:0042904) 9-cis-retinoic acid metabolic process(GO:0042905)
0.0 0.1 GO:0007217 tachykinin receptor signaling pathway(GO:0007217)
0.0 0.1 GO:0097067 cellular response to thyroid hormone stimulus(GO:0097067)
0.0 0.0 GO:0060137 maternal process involved in parturition(GO:0060137)
0.0 0.0 GO:1900169 regulation of glucocorticoid mediated signaling pathway(GO:1900169)
0.0 0.0 GO:0071332 cellular response to fructose stimulus(GO:0071332)
0.0 0.0 GO:1901420 negative regulation of response to alcohol(GO:1901420)
0.0 0.0 GO:0048388 endosomal lumen acidification(GO:0048388)
0.0 0.1 GO:0031508 pericentric heterochromatin assembly(GO:0031508)
0.0 0.2 GO:0051601 exocyst localization(GO:0051601)
0.0 0.0 GO:0044805 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) late nucleophagy(GO:0044805)
0.0 0.1 GO:0060391 positive regulation of SMAD protein import into nucleus(GO:0060391)
0.0 0.0 GO:0009448 gamma-aminobutyric acid metabolic process(GO:0009448)
0.0 0.0 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.0 0.1 GO:1900028 negative regulation of ruffle assembly(GO:1900028)
0.0 0.1 GO:1902262 apoptotic process involved in patterning of blood vessels(GO:1902262)
0.0 0.0 GO:1990086 lens fiber cell apoptotic process(GO:1990086)
0.0 0.1 GO:0051593 response to folic acid(GO:0051593)
0.0 0.0 GO:0021914 negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning(GO:0021914)
0.0 0.0 GO:0051791 medium-chain fatty acid metabolic process(GO:0051791)
0.0 0.0 GO:0051795 positive regulation of catagen(GO:0051795)
0.0 0.0 GO:2000468 regulation of peroxidase activity(GO:2000468)
0.0 0.0 GO:1902075 cellular response to salt(GO:1902075)
0.0 0.1 GO:0090051 negative regulation of cell migration involved in sprouting angiogenesis(GO:0090051)
0.0 0.0 GO:0090168 Golgi reassembly(GO:0090168)
0.0 0.1 GO:0048069 eye pigmentation(GO:0048069)
0.0 0.0 GO:0018992 germ-line sex determination(GO:0018992)
0.0 0.0 GO:0070358 actin polymerization-dependent cell motility(GO:0070358)
0.0 0.1 GO:0048702 embryonic neurocranium morphogenesis(GO:0048702)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0032937 SREBP-SCAP-Insig complex(GO:0032937)
0.0 0.2 GO:0044214 spanning component of plasma membrane(GO:0044214) spanning component of membrane(GO:0089717)
0.0 0.1 GO:0036488 CHOP-C/EBP complex(GO:0036488)
0.0 0.1 GO:0071141 SMAD protein complex(GO:0071141)
0.0 0.2 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.2 GO:0000439 core TFIIH complex(GO:0000439)
0.0 0.1 GO:0030981 cortical microtubule cytoskeleton(GO:0030981)
0.0 0.0 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.0 0.1 GO:0061689 tricellular tight junction(GO:0061689)
0.0 0.0 GO:0002193 MAML1-RBP-Jkappa- ICN1 complex(GO:0002193)
0.0 0.2 GO:0038201 TOR complex(GO:0038201)
0.0 0.0 GO:0097057 TRAF2-GSTP1 complex(GO:0097057)
0.0 0.2 GO:0036038 MKS complex(GO:0036038)
0.0 0.2 GO:0000145 exocyst(GO:0000145)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886) DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates(GO:0051718)
0.0 0.2 GO:0005534 galactose binding(GO:0005534)
0.0 0.2 GO:0032564 dATP binding(GO:0032564)
0.0 0.1 GO:0004095 carnitine O-palmitoyltransferase activity(GO:0004095)
0.0 0.1 GO:0003829 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity(GO:0003829)
0.0 0.1 GO:0008525 phosphatidylcholine transporter activity(GO:0008525)
0.0 0.1 GO:0005072 transforming growth factor beta receptor, cytoplasmic mediator activity(GO:0005072)
0.0 0.1 GO:0004035 alkaline phosphatase activity(GO:0004035)
0.0 0.3 GO:0046703 natural killer cell lectin-like receptor binding(GO:0046703)
0.0 0.1 GO:0016176 superoxide-generating NADPH oxidase activator activity(GO:0016176)
0.0 0.1 GO:0003836 beta-galactoside (CMP) alpha-2,3-sialyltransferase activity(GO:0003836)
0.0 0.2 GO:0005161 platelet-derived growth factor receptor binding(GO:0005161)
0.0 0.1 GO:0018631 3-(3-hydroxyphenyl)propionate hydroxylase activity(GO:0008688) 4-chlorobenzaldehyde oxidase activity(GO:0018471) 3,5-xylenol methylhydroxylase activity(GO:0018630) phenylacetate hydroxylase activity(GO:0018631) 4-nitrophenol 4-monooxygenase activity(GO:0018632) dimethyl sulfide monooxygenase activity(GO:0018633) alpha-pinene monooxygenase [NADH] activity(GO:0018634) 1-hydroxy-2-naphthoate hydroxylase activity(GO:0018637) toluene 4-monooxygenase activity(GO:0018638) xylene monooxygenase activity(GO:0018639) dibenzothiophene monooxygenase activity(GO:0018640) 6-hydroxy-3-methyl-2-oxo-1,2-dihydroquinoline 6-monooxygenase activity(GO:0018641) chlorophenol 4-monooxygenase activity(GO:0018642) carbon disulfide oxygenase activity(GO:0018643) toluene 2-monooxygenase activity(GO:0018644) 1-hydroxy-2-oxolimonene 1,2-monooxygenase activity(GO:0018646) phenanthrene 1,2-monooxygenase activity(GO:0018647) tetrahydrofuran hydroxylase activity(GO:0018649) styrene monooxygenase activity(GO:0018650) toluene-4-sulfonate monooxygenase activity(GO:0018651) toluene-sulfonate methyl-monooxygenase activity(GO:0018652) 3-methyl-2-oxo-1,2-dihydroquinoline 6-monooxygenase activity(GO:0018653) 2-hydroxy-phenylacetate hydroxylase activity(GO:0018654) 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA 1,2-monooxygenase activity(GO:0018655) phenanthrene 3,4-monooxygenase activity(GO:0018656) toluene 3-monooxygenase activity(GO:0018657) 4-hydroxyphenylacetate,NADH:oxygen oxidoreductase (3-hydroxylating) activity(GO:0018660) limonene monooxygenase activity(GO:0019113) 2-methylnaphthalene hydroxylase activity(GO:0034526) 1-methylnaphthalene hydroxylase activity(GO:0034534) bisphenol A hydroxylase A activity(GO:0034560) salicylate 5-hydroxylase activity(GO:0034785) isobutylamine N-hydroxylase activity(GO:0034791) branched-chain dodecylbenzene sulfonate monooxygenase activity(GO:0034802) 3-HSA hydroxylase activity(GO:0034819) 4-hydroxypyridine-3-hydroxylase activity(GO:0034894) 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase activity(GO:0043719) 6-hydroxynicotinate 3-monooxygenase activity(GO:0043731) thalianol hydroxylase activity(GO:0080014)
0.0 0.0 GO:0061629 RNA polymerase II sequence-specific DNA binding transcription factor binding(GO:0061629)
0.0 0.2 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.0 0.1 GO:0018741 alkyl sulfatase activity(GO:0018741) endosulfan hemisulfate sulfatase activity(GO:0034889) endosulfan sulfate hydrolase activity(GO:0034902)
0.0 0.0 GO:0032557 pyrimidine ribonucleotide binding(GO:0032557)
0.0 0.1 GO:0015016 [heparan sulfate]-glucosamine N-sulfotransferase activity(GO:0015016)
0.0 0.0 GO:0015182 L-asparagine transmembrane transporter activity(GO:0015182) L-glutamine transmembrane transporter activity(GO:0015186)
0.0 0.0 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.0 GO:0004461 lactose synthase activity(GO:0004461)
0.0 0.0 GO:0051425 PTB domain binding(GO:0051425)
0.0 0.1 GO:0031995 insulin-like growth factor II binding(GO:0031995)
0.0 0.1 GO:0008494 translation activator activity(GO:0008494)
0.0 0.1 GO:0042015 interleukin-20 binding(GO:0042015)
0.0 0.1 GO:1990239 steroid hormone binding(GO:1990239)
0.0 0.0 GO:0017162 aryl hydrocarbon receptor binding(GO:0017162)
0.0 0.1 GO:0038191 neuropilin binding(GO:0038191)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 ST INTERLEUKIN 4 PATHWAY Interleukin 4 (IL-4) Pathway
0.0 0.1 PID PTP1B PATHWAY Signaling events mediated by PTP1B

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 REACTOME XENOBIOTICS Genes involved in Xenobiotics
0.0 0.1 REACTOME THE ACTIVATION OF ARYLSULFATASES Genes involved in The activation of arylsulfatases
0.0 0.2 REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS Genes involved in Termination of O-glycan biosynthesis
0.0 0.2 REACTOME SULFUR AMINO ACID METABOLISM Genes involved in Sulfur amino acid metabolism