Motif name | Z-value | Associated genes | Profile | Logo |
---|---|---|---|---|
Tal1 | 43.90 |
|
![]() |
![]() |
Rfx3_Rfx1_Rfx4 | 31.11 |
|
![]() |
![]() |
Hnf4a | 24.18 |
|
![]() |
![]() |
Hnf1b | 23.65 |
|
![]() |
![]() |
Nfia | 19.84 |
|
![]() |
![]() |
Nfic_Nfib | 17.41 |
|
![]() |
![]() |
Zbtb18 | 16.76 |
|
![]() |
![]() |
Rfx2_Rfx7 | 15.46 |
|
![]() |
![]() |
Gata4 | 15.42 |
|
![]() |
![]() |
Tead3_Tead4 | 15.15 |
|
![]() |
![]() |
In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.
Sample name | Condition | Replicate/Batch | CRE number | Mean CRE signal intensity | Std. Dev. of signal intensity across CREs | Fraction of CRE signal intensity variance explained by motif activities |
---|---|---|---|---|---|---|
embryonicfacialprominence_E11.5 | 29890 | 3.295 | 1.1646 | 0.086 | ||
embryonicfacialprominence_E12.5 | 21300 | 3.252 | 1.1245 | 0.079 | ||
embryonicfacialprominence_E13.5 | 16267 | 3.156 | 1.0439 | 0.102 | ||
embryonicfacialprominence_E14.5 | 54652 | 3.545 | 1.3021 | 0.117 | ||
embryonicfacialprominence_E15.5 | 23321 | 3.289 | 1.0929 | 0.098 | ||
forebrain_E11.5 | 68171 | 3.264 | 1.2877 | 0.187 | ||
forebrain_E12.5 | 75944 | 3.340 | 1.2975 | 0.219 | ||
forebrain_E13.5 | 69462 | 3.498 | 1.3999 | 0.252 | ||
forebrain_E14.5 | 86946 | 3.580 | 1.4850 | 0.258 | ||
forebrain_E15.5 | 57761 | 3.509 | 1.3661 | 0.232 | ||
forebrain_E16.5 | 69444 | 3.582 | 1.5304 | 0.253 | ||
forebrain_PN0 | 86359 | 3.607 | 1.5592 | 0.240 | ||
heart_E11.5 | 31149 | 3.142 | 1.0729 | 0.149 | ||
heart_E12.5 | 48649 | 3.289 | 1.1301 | 0.161 | ||
heart_E13.5 | 25132 | 3.116 | 1.2222 | 0.081 | ||
heart_E14.5 | 24382 | 3.215 | 1.1537 | 0.136 | ||
heart_E15.5 | 36460 | 3.361 | 1.2454 | 0.132 | ||
heart_E16.5 | 56159 | 3.398 | 1.3787 | 0.134 | ||
heart_PN0 | 64251 | 3.241 | 1.4403 | 0.155 | ||
hindbrain_E11.5 | 67174 | 3.567 | 1.3774 | 0.224 | ||
hindbrain_E12.5 | 76225 | 3.325 | 1.2223 | 0.187 | ||
hindbrain_E13.5 | 49938 | 3.422 | 1.2944 | 0.168 | ||
hindbrain_E14.5 | 54075 | 3.297 | 1.2199 | 0.171 | ||
hindbrain_E15.5 | 38283 | 3.478 | 1.2472 | 0.154 | ||
hindbrain_E16.5 | 43307 | 3.582 | 1.3332 | 0.178 | ||
hindbrain_PN0 | 54223 | 3.456 | 1.2662 | 0.160 | ||
intestine_E14.5 | 48585 | 3.414 | 1.2041 | 0.127 | ||
intestine_E15.5 | 68995 | 3.711 | 1.3100 | 0.209 | ||
intestine_E16.5 | 73980 | 3.698 | 1.3496 | 0.218 | ||
intestine_PN0 | 64326 | 3.408 | 1.3408 | 0.222 | ||
kidney_E14.5 | 37965 | 3.504 | 1.2555 | 0.086 | ||
kidney_E15.5 | 46953 | 3.445 | 1.2236 | 0.089 | ||
kidney_E16.5 | 51557 | 3.529 | 1.2296 | 0.163 | ||
kidney_PN0 | 42205 | 3.271 | 1.2291 | 0.134 | ||
limb_E11.5 | 37284 | 3.159 | 1.0833 | 0.102 | ||
limb_E12.5 | 24824 | 3.261 | 1.1431 | 0.081 | ||
limb_E13.5 | 42976 | 3.340 | 1.2192 | 0.091 | ||
limb_E14.5 | 51515 | 3.331 | 1.2729 | 0.106 | ||
limb_E15.5 | 16239 | 3.187 | 1.0455 | 0.124 | ||
liver_E11.5 | 55761 | 3.260 | 1.2828 | 0.229 | ||
liver_E12.5 | 54157 | 3.241 | 1.4497 | 0.230 | ||
liver_E13.5 | 59430 | 3.244 | 1.5786 | 0.226 | ||
liver_E14.5 | 62775 | 3.132 | 1.5929 | 0.211 | ||
liver_E15.5 | 60864 | 3.247 | 1.5796 | 0.204 | ||
liver_E16.5 | 69217 | 3.387 | 1.6163 | 0.221 | ||
liver_PN0 | 101836 | 3.377 | 1.6759 | 0.217 | ||
lung_E14.5 | 60477 | 3.655 | 1.3376 | 0.096 | ||
lung_E15.5 | 39182 | 3.351 | 1.3456 | 0.169 | ||
lung_E16.5 | 63372 | 3.756 | 1.3682 | 0.132 | ||
lung_PN0 | 105606 | 3.715 | 1.4823 | 0.178 | ||
neuraltube_E11.5 | 41467 | 3.112 | 1.2977 | 0.140 | ||
neuraltube_E12.5 | 58351 | 3.347 | 1.3591 | 0.152 | ||
neuraltube_E13.5 | 51713 | 3.549 | 1.3851 | 0.160 | ||
neuraltube_E14.5 | 54934 | 3.444 | 1.3355 | 0.168 | ||
neuraltube_E15.5 | 49481 | 3.454 | 1.3104 | 0.140 |