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ENCODE: H3K4me3 ChIP-Seq of different mouse tissues during embryonic development
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Sample name: neuraltube115

QC summary table

QC statistics for this sample

Comparison with ChIP-Seq ENCODE datasets

Mapping

Fraction of mapped reads for the IP replicates:
0.820
66th percentile
Fraction of mapped reads for the background replicates:
0.818
66th percentile

ChIP enrichment signal intensity

Noise level ChIP signal intensity:
0.125
12nd percentile
Error in fit of enrichment distribution:
0.455
34th percentile

Peak statistics

Number of peaks:
62514
93rd percentile

Regulatory motifs sorted by significance (z-value) for sample neuraltube115.

−10−50510Mecp2Irf2_Irf1_Irf8_Irf9_Irf7Sp1Etv1_Etv5_GabpaHcfc1_Six5_Smarcc2_Zfp143Nrf1Nfic_NfibKlf12_Klf14_Sp4Hsfy2Foxj3_Tbl1xr1Zfp110Runx2_Bcl11aEsr2Klf1Yy1_Yy2Gata3Plag1RestSmad1Zfx_Zfp711

Regulatory motifs sorted by significance (z-value).